Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <<<<<<<<<MYB2                       --------->ATHB51                       --------->ATHB12                      <---------YAB1                                                 --------->YAB1                     --------->AHL20(2)                                             <---------YAB1                     <---------AHL20(2)                                          <---------YAB1                     --------->AHL20(1)                                        --------->YAB1                     <---------AHL20(1)                                <----------DOF2                    --------->YAB1                              --------->ATHB12 --------->ICU4                 --------->YAB1                                <-------TEIL ------>ZmHOX2a(1)       <------ZmHOX2a(2) <---------WOX13(1)               <---------CCA1(2)<---------MYB59      <----   gagtttgagatcgactcaaaaattataattggttttctcaaaacatggattagacgactcatatattcattgtctttcctaacatgattatagtatggct  19566600                                                                                            <--------                                                                                           <---------ANAC58        <------ZmHOX2a(1)                                                                  <---------ANAC58 <---------ANAC58                              --------->MYB52(1)                       ---------->ID1 <---------ANAC58               --------->ARR11(3)                                    <-----------RAV1(1) --------->YAB1                <---------CCA1(2) <------------MYB.PH3(1)       <----------DOF2      < <---------ANAC46         <---------AHL20(2) <---------MYB52(2)                <---------DAG2       < ------DOF2   --------->ARR14(2)<---------ARR11(3)       <---------YAB1     <-----------GT1<---------ANAC46   ctatcgtgaaggactggatagtctgtattttatatatctatagaaaaactaacagttttataaatgagttagcaaaatatacttttttttgttgctttaa  19566700                                                                         --------->LBD16          <--                                <---------AHL20(2)                      --------->ANAC58        <----                               --------->AHL20(2)              ------>ZmHOX2a(2)                -----                              <---------AHL20(2)             <---------ARR14(2)                <-----                             --------->YAB1                  --------->ARR14(2)                <-----                            <---------YAB1                  <------ZmHOX2a(1)                  ------                           --------->AHL20(2)          <---------HSFB2a(2)                     ------ --DOF2<-----------GT1     <---------AHL20(2)          --------->HSFB2a(2)           <---------YAB1 ----------DOF2            --------->AHL20(1)       <---------YAB1      --------->ANAC46 ----------->GT1 ---------DAG2             <---------AHL20(1)   <---------WOX13(1)      --------->ANAC58 --------->YAB1   aactttttttttctaattctatcccatattatattaattcgattttgttgaatgattctagaggatcgatatacccgaaacatgtttaaaattgtaattt  19566800 -------YAB1 -----AHL20(2) ---->AHL20(2) ----AHL20(1)            <------ZmHOX2a(1)                                            <------ZmHOX2a(1) ----AHL20(2)         <------ZmHOX2a(1)           ------>MYB46(1)                   <---------TOE2(3) --->AHL20(2)  <---------ZAT14               <-----------GT1                        <---------TOE1(3) --->AHL20(1)  --------->ZAT14   ---------->ID1   ------>MYB83                --------->ATHB12   ----   atttttagttttttcagtgaagtaggaggacatttgtccccctcaaatcaccaaatttttaaaaaaaaaaaacttatacatgatttaaggattatgcaat  19566900                                                                                                  <--                                                                                                  ---                                                                                                 <---               <---------At4g35610                                                         --------->AHL20(2)               --------->At4g35610                                          ------>ZmHOX2a(2) <------            <---------MYB52(1)           --------->At4g35610              --------->ARR14(2)  -------          --------->ANAC46          <--------P                            <---------ARR14(2) -------- ----->YAB1<-----------HVH21  <---------ALFIN1      --------->LBD16     ----------->HVH21--------->AHL20(2)   tgtattgtctgtccgtcatttgactcattttcccactggtaagagctcaacttcagggattaatgggcttaggcctgatccgtttaaaaaaaaaaatata  19567000                                                                    <---------ALFIN1                                                                   ------>NtERF2                                                                   <---------SPL7                                                                   <------NtERF2                                                                  ----------->RAV1(1)                                                                  --------->RRTF1(2)                                                                  --------->RAP2.3(2)                                                                  --------->DEAR3(1)                                                                  --------->RAP2.6(2)                                                                 --------->RAP2.3(1)                                               <---------ALFIN1 ------>NtERF2                                <---------ANAC58  <----------DOF2--------->ANAC46                                <---------ANAC55(1)             <---------ATERF1(1)       -----------                                <---------ANAC55(2)    <---------YAB1                    --------->ZAT14                                <---------ANAC46  <---------DAG2--------->LBD16          ------------                                <---------ANAC58------>MYB46(1)--------->ANAC46          ------------ -------ARR11(3)               <-----------------------TaNAC69(2)--------->ATERF1(1)   --------->ANAC58 ------>ARR11(3)        ----------->GT1       --------->MYB46(3)--------->At4g35610    --------->ANAC46 ------CCA1(2)          *TSS  --------->MYB52(1)------>MYB83  <---------LBD16          --------->ANAC58 ---AHL20(1)         <---------MYB52(1)     --------->PCF2  --------->ARR14(2)       <---------ALFIN1 -->AHL20(1)        <---------RAP2.6(3)     <---------TCP15(1)--------->MYB46(3)   ------>ZmHOX2a(1) ->AHL20(2)         <---------SPL7         <------ZmHOX2a(1)<---------ARR14(2)    --------->ANAC46   tatcttcataagagagtttggccgtttggaaataacgtgtaagtaggacccacttttgtgattatccgccgcacagaagtctctcctccactccacaaat  19567100                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                    <----------DOF2             <----       <------NtERF2                                          <---------ALFIN1                ------>NtERF2      ------>NtERF2                                          <---------ZAT14                  -------      --------->LBD16                                        --------->ZAT18                 --------     --------->LBD16                                         --------->ZAT14                 --------     <---------LBD16                                      <---------ZAT2                     --------    <---------LBD16                                       --------->At4g35610                -------- ---->AGL15                                               <---------At4g35610               <-------- ----->AGL2                            >>>>>>>>>>MYB80    --------->ZAT2                   ------>ZmHOX2a(1) ----->AGL3                >>>>>>>>>TBF1         --------->AHL20(2) =================================   agcattcccggcgagagacagagagcgaagaagaagactcaaaccaaaaaaaaaaatggaagctgcactgctttctcttcagcccttcccttcctccgcc  19567200      <---------TGA1a      --------->TGA1a      --------->O2      ==========================================MYC_MYB      <---------O2    ------->GAMYB --------->MYB52(1) ------>ANAC58 ------>ANAC46 ------>ANAC58 -----ALFIN1 -->LBD16 ->ANAC46                                   <---------ARR11(3)              --------->DAG2 ->DEAR3(1)                                 --------->ARR11(3)            ---------->DOF2 ->ANAC58                              -------->P                 <---------ANAC58 ->ANAC58              --------->MYB46(3)   --------->ARR14(2)    <---------ANAC58   <----------DOF2 -LBD16              <-----------GT1   --------->MYB52(1)     ------>ZmHOX2a(1)      <---------DAG2 ===============bZIP_DOF     --------->ANAC46                <---------ALFIN1     <-----------GT1   actcaacgacgtctctctccgtttaacctccacaatacacttaccagaccttcttcttatgctcctcttcgtgctcaaaaggtttcactttttcatccaa  19567300                                                                   <---------GLK1(2)                                                                <---------WOX13(1)          ---------                        ------>ZmHOX2a(1)                     --------->ATHB12             <---------YAB1                       --------->TOE2(3)               <---------At4g35610            --------->GLK1(2)              <---------CCA1(2)           ----------->GT1<---------YAB1               <---------ARR11(3)           <-----------GT1                <---------ANAC55(2)<-------TEIL             --------->ARR11(3)   ttcaatcttcttgtttctatcttatcctcagaattgtatacaatatgtaaatttcagtgctgattcattgattctcaaaattgatgaaaatctatgattc  19567400                                                         ------>ZmHOX2a(1)                                                    <------MYB46(1)                                                    <------MYB83                                                   --------->MYB46(2)                                                   --------->MYB111(2)                                                   --------->MYB111(1)                                                   --------->MYB59                                                   ----------->ARR10                                                  <--------P         <---------HSFB2a(2)                             <------ZmHOX2a(1)  <------MYB46(1)      --------->HSFB2a(2)                          <-----------RAV1(2)   <------MYB83         --------->LBD16                      --------->At4g35610      --------->MYB111(2)   ------>ZmHOX2a(1)    <---------MYB46(3)    <------MYB46(1)   <---------At4g35610      --------->MYB111(1)  <---------LBD16     <---------ANAC58    <------MYB83<----------DOF2                --------->MYB46(2)<---------ARR14(2)     <---------ANAC58  <--------P   <---------ANAC58                --------->MYB59   --------->ARR14(2)     <---------ANAC46 >ATHB12       <---------ANAC58              <---------MYB52(1)  --------->ARR11(3)<-----------RAV1(1)   gagagttggtatcaatagcttttcagcttcaggagtttggaatcgatgttaggtaggtcctctctagtatcctggaatcgtttttgtgttgcttgttgaa  19567500  Previous    Next  AGI:  At5g48220.1    Description:  indole-3-glycerol phosphate synthase, putative. similar to indole-3-glycerol phosphate synthase (IGPS) [Arabidopsis thaliana] (TAIR:AT2G04400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41139.1); contains InterPro domain Indole-3-glycerol phosphate synthase, central region; (InterPro:IPR001468); contains InterPro domain Ribulose-phosphate binding barrel; (InterPro:IPR011060); contains InterPro domain Indole-3-glycerol phosphate synthase (InterPro:IPR013798); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785) Range:  from: 19567024    to: 19569493    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version