Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <-------GAMYB                    <------NtERF2             <---------MYB46(3)                   ------>NtERF2              ------>ZmHOX2a(2)          <-----------HVH21                  <------ZmHOX2a(2)                                    ---          <-----------TGA1           --------->WRKY12                                           =====    <---------MYB52(1)             <-------GAMYB--------->DOF5.7(2)                             <---- -------GLK1(1)   <---------ALFIN1------>ZmHOX2a(2)                                           <------ --->TEIL--------->YAB1 <---------ETT(2) --------->DEAR3(2)                                  <------- -----CCA1(2) --------->ANAC58  <---------ARR11(3)             --------->AtMYB61      <---------LBD16 --MYB52(1)   --------->ANAC58  --------->ARR11(3) <---------YAB1         ---------->DOF2<-----------HVH21   atctccgtttatcgtcacggccaccgtagacatagatcgttgaaccgatcgttaccatcgagacaccaaaacaggggaaaggagcctctccggtcgcagg  19559300                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)           --------->At4g35610                                       <---------ARR11(3)           <---------At4g35610                                       --------->ARR11(3)      <---------ANAC58                                     --------->ICU4        <---------MYB52(1)   <---------ETT(2)                ---------->DOF2        ----------------------->TaNAC69(2) ------>At4g35610               <---------ANAC55(2)       <-------GAMYB               <---------ZAT14 ===============================HOX2a_HOX2a              ------>ZmHOX2a(2)            --------->ZAT14 --ZmHOX2a(1)                   ----------->GT1          <---------MYB46(3)  --------->AtMYB61 ---TOE1(2)              <------ZmHOX2a(2)    <---------YAB1   <---------ANAC58    ----------->GT1 ----RAV1(2)            <---------ARR11(3)<-------GAMYB  --------->ATHB12--------->MYB46(3)        --   agctatcgaccattcttgagtctcaagatcgaaaacgtaaagatcgttatcaatatggatcgttggcttaagctcaccaccaaaacagtaaactttgttc  19559400                                                       <---------At4g35610                                                       <---------ZAT2                                                       ----------->RAV1(2)                                                      --------->MYB52(1)                                                      -------->P                                                      ------>MYB83                                                    --------->MYB46(3)                <-------MYC3                <---------DAG2     <---------TOE2(3)             <---------ANAC46               <----------DOF2    <---------YAB1             <---------ANAC58          --------->ZAT2 ------>MYB46(1)             <---------ANAC58          <---------ZAT2<---------ALFIN1 <-----------GT1               -       --------->WRKY18(1)        <------ZmHOX2a(1) <---------MYB59   --------->YAB1                -      <-----------HVH21         --------->LBD16  <-----------GT1   <---------ICU4         ---------->DOF2  ------->GAMYB ------->MYC3   <-----------RAV1(2)--------->PCF2--------->YAB1          <------ZmHOX2a(2) --------->MYB46(3) <---------At4g35610--------->At4g35610    <-----------GT1          <---------ARR11(3) ------->MYB52(1)   --------->At4g35610<---------At4g35610  <---------WOX13(1)         --------->ARR11(3)   ccaacgacggtcatggcatgtgagcttctagccccaggaccagctcctttttgacccacctgattaacataatcacattacatttctaagatcaaagaaa  19559500           --------->YAB1           --------->TOE2(3)                        <----------DOF2         --------->GLK1(2)                         --------->TOE2(3)              <---------AHL20(2)        <---------GLK1(2)                       <-----------GT1          --------->LBD16    ---------->DOF2                           <----------DOF2            ----------->HVH21   --------->AHL20(2) <---------YAB1         <---------ICU4            --------->ANAC46 ----->MYB83      <---------ANAC55(2)      ------->TEIL              <---------ALFIN1<-----------GT1- ----->MYB46(1)   --------->ANAC55(2)--------->ATHB12  <-----------GT1 <---------LBD16   <---------MYB52(1)   ccaaataaaagaatcttaatatgtattatagagattgaaagattgaatctttacctttaaccatttgttctccaccggacacatttttttcgttactcac  19559600                                                                 <---------ZAT18                                                                 --------->ZAT18                                                               --------------->AtSPL8                                                              <---------ANAC58                                                              <---------ANAC55(1)                                                              <---------ANAC55(2)       <---------AHL20(2)                                     <---------ANAC46     <---------CCA1(1)                                        <---------ANAC58     <---------RVE1(1)                                     <---------MYB52(1)    <---------ARR11(3)        --------->DAG2    <---------MYB46(3) ------->TEIL    <---------GLK1(2)        ---------->DOF2 <-----------RAV1(1) <---------ZAT14    --------->ARR11(3)---------->DOF2 ---------->ID1*TSS  <-------GAMYB                ----------->GT1 --------->DOF2   <------ZmHOX2a(1) <-----------RAV1(1)  <-----------RAV1(1)   <------ZmHOX2a(1) <---   cagaaagatttttttttagaggatgaaagaaaaaagttttgtggctattgttgttgatgctgttgcgtgtacttacttataggaaaatgtggtatcaagg  19559700                                                                                     <-----------GT1                                                                                    --------->DOF5.7(2)                                                                                  <---------ANAC55(2)                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                                 <-------TEIL                   --------->AHL20(2)                                           --------->ARR14(1)        <---------------AtSPL8                                                 <---------ARR14(2)        <---------TOE2(3)                                        ---------->DOF2--------->CCA1(2)       ---------->DOF2                               <---------ANAC46          --------->ARR11(1)      --------->YAB1      <---------YAB1           --------->MYB52(1)          --------->ARR14(2)      --------->AHL20(2)<-----------GT1         --------->ANAC55(2)           <---------GLK1(1)------ ------------>CBF----------->GT1                <---------ANAC55(2)          ----------->ARR10<------ ------PCF5    ---------->DOF2           <---------TOE2(3)      <---------AHL20(2)--------->ANAC55(2)   gaccacaattaaagtacaaaagtaaattacgatttctcttactaagaattaagtaacgtctaatattaaaagataaatggagatacgttaccatctatga  19559800                                                                                                    -                                                                <----------DOF2                     <                                                     <---------ANAC55(1)                        <----                                                     <---------ANAC55(2)                --------->GLK1(2)                                                     <---------ANAC58                   <---------ARR11(3)                                                     <---------ANAC46           <---------TOE2(3)<---                                                     <---------TGA1a            ----------->GT1 -----                                                     --------->O2        ----------------->AG--------                 ----------->HVH21                   --------->TGA1a     ============================           <---------AHL20(2)                        --------->ANAC55(2) --------->ANAC55(2)<--------           --------->AHL20(1)                        <---------ANAC58    ----------------->AGL1<-----      <---------YAB1                                 ======================bZIP_DOF     --------->ARR11(3) --->YAB1  <---------AHL20(1)                        <---------O2    <---------ANAC58  --------->CCA1(1) ---YAB1   --------->AHL20(2)              <---------------AtSPL3    <---------ANAC58  --------->RVE1(1)   tactaattcttattttattgtgacagattgaagagtatttctgtaatagtacgagacgtgttctatctttggcttacctattaagaaaaaaatcttgatt  19559900                --------->LBD16         --------->ATHB51         <---------ICU4         <---------AHL20(2)     --------->AHL20(2)     <---------AHL20(2) --------->AHL20(2)                                                                                 - <---------AHL20(2)                                     --------->AHL20(2)         <xxxxxxxxxxxxxxxxx -------->AHL20(2)                                      <---------AHL20(2)       <xxxxxxxxxxxxxxxxxxx ---------AHL20(2)                                     --------->AHL20(2) <---------AHL20(1)    <xxxx -----AHL20(2) --------------->AGL15                  <---------YAB1      --------->AHL20(2)   xxxxxx ------AHL20(2)--------->HSFC1(1)                  <---------YAB1         <---------AHL20(2)  ------- ---->AHL20(2) --------->HSFB2a(2)        --------->ARR14(2)             --------->AHL20(2)   xxxxxxx ->ATHB12--------->AHL20(2)      --------->YAB1    --------->ICU4        <---------AHL20(2)xxxxxxxxxx ==============================MADS_MADS  <---------ARR14(2)   <---------------AtSPL8<xxxxxxxxxxxxxxx -YAB1  <---------AHL20(2)      <---------YAB1------>ZmHOX2a(1)--------------->AtSPL3xxxxxxxxxxxxxxxx ----WOX13(1)  <---------HSFB2a(2)       <---------CCA1(2) ---------->DOF2--------->AHL20(1)xxxxxxxxx   aatttaaaaaattatttccagaattaggcgaggtatcatagtcatatcctcttattattaaaaaagaagtacaaattaaatttttgtctaatttagcctc  19560000                                                                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                                --------->LBD16  <---------YAB1                                                              <---------LBD16 -------->YAB1                                                                ------>ZmHOX2a(2) xxxxxxsmallRNA(i2)                                                         <---------ARR11(3)      x xxxxsmallRNA(l2)                                                           --------->ARR14(2)    <xx xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                   --------->AHL20(2)         xxxxxx xxxxxxxxxxxxxxxx>smallRNA(le3)         <xxxxxxxxxxxxxxxxsmallRNA(s)xxxxxxxxxxxxxxxx>smallRNA(i) xxxx -->TOE2(3)                   ------>ZmHOX2a(1)                     <---------AHL20(2)xxxxxxxxxxxxxxx xxxxxxxxxxxxxxxx>smallRNA(le3)       ----------->GT1          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)<xx xxxxxx>smallRNA(i)          <---------ANAC58               <-----------GT1 <---------ARR14(2) xxxxxx xxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->AHL20(2)<------ZmHOX2a(2) xxxxxx xxxxxxx>smallRNA(fl3)       --------->TOE2(3)           ------>MYB83      <------ZmHOX2a(1)   xxxxxx xxxxxxxxxxxxx>smallRNA(si3) <---------ANAC58            ------>MYB46(1)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   aattttgatttcaattttgaattttgttcttccttatcaagggtaaaatcgtccaaaccaaataactaaattaaacaggatccgcgttttacatagacgg  19560100                                                                         --------->YAB1                                                                   --------->YAB1                 <----------DOF2                                   --------->TOE1(3)         <---------AHL20(2)                                        --------->TOE2(3)        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)             --------->ANAC58 --------->TOE1(3)     <---------YAB1                                     --------->ANAC58 --------->TOE2(3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                   --------->ANAC55(2) xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     <---------ANAC55(2)          --------->MYB52(2) xxxxxxxxxxxxxxxxx>smallRNA(si3)                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxx>smallRNA(s2)      ----------->GT1        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2) xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxx>smallRNA(se3)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)       -------- xxxxxxxxxxxxxxx>smallRNA(fl3)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <------- xxxxxxxxxxxxxxxxx>smallRNA(le3)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <--------   gtgagttatgtttaatgggcttttgatcacatgtaaaactacataataggttaccatcaagtaatgcaatcttaaccataacacgattagttgtatatct  19560200  Previous    Next  AGI:  At5g48180.1    Description:  kelch repeat-containing protein. similar to kelch repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G07720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41153.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 19558163    to: 19559652    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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