Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <---------ANAC46                    ------>NtERF2                   --------->At1g77200                   --------->RAP2.3(2)                   --------->DEAR3(1)                   --------->RRTF1(3)                   ----------->HVH21                   --------->DREB2C(2)                   --------->RAP2.3(3)                  <------NtERF2                  --------->ATERF1(1)                  --------->ORA47(2)                  --------->DEAR3(2)                  --------->RAP2.3(1)                  --------->RRTF1(1)                  --------->ERF1                 <---------ATERF1(1)               ------->PIF5               <-------PIF5              --------->ANAC58         --------->ANAC46         --------->ANAC58  <---------ATERF1(1)<------NtERF2                                               <---------O2 <------NtERF2<---------ALFIN1                                                   --------->TGA1a ----->NtERF2 --------->ANAC58                                                   <---------ANAC58 --------ANAC46------->MYC2                                                      <---------ANAC58 --------ANAC58<-------MYC2                                                      <---------TGA1a --------ANAC58------->MYC3                                                      <---------ANAC46 ----NtERF2   --------->ANAC46                          ----------->HVH21<---------At4g35610 ------>ATERF1(1)------>NtERF2                      <---------ZAT14  ----------->HVH21 ------DEAR4(2)<-------MYC3                         =======================================bZIP_DOF ------ATERF1(1)--------->ANAC46                    --------->ZAT14<---------At4g35610 ---->ALFIN1  --------->TGA1a                       ---------->DOF2--------->At4g35610 -----DEAR3(1)=================================================bZIP_DOF  <---------ZAT2       <------ -->ZAT2 --------->ANAC58              --------->ICU4--------->DAG2<---------ZAT2--------->O2 -------   ggcgcgtctccaagccacgcgccgacgtagaggcgctcgtagtaatggacacagtaaagtgacagagagagctgaagctggtctcgtgtccaaagaagct  19550100                                                                     --------->ANAC58                                                                     --------->ANAC46                                                              ----------->RAV1(1)                                                              <---------RAP2.6(3)                                                              ------>NtERF2                                                             --------->DEAR3(1)                                                             --------->RAP2.3(3)                         <-------TEIL                        ----------->HVH21                        --------->CCA1(2)                    <---------ETT(1)                 ----------->HVH21                           --------->RAP2.6(2)                 <---------SPL7                              --------->RAP2.3(2)          <-----------RAV1(2)                               --------->RAP2.3(1)         ----------------->AGL1                             --------->DEAR3(2)     <---------ANAC58  <---------ARR14(2)                  --------->At4g35610 <----------ID1     <---------ANAC58  --------->ARR14(2)           ------>NtERF2  --------->MYB52(1)            ----    --------->ALFIN1<---------ANAC46               --------->RAP2.6(2)------->GAMYB         <-------- ---HSFC1(2) <------ZmHOX2a(1)                <---------MYB52(1)--------->ANAC46   ---------->DOF2 -->HSFC1(2)----------->HVH21  <------ZmHOX2a(1)  --------->MYB46(3) --------->ANAC58       <--------   tagggagtcgtgccaggacgggacggatacagaggaagtagagacatcggtagccaccaagagccgacacaacggaacgaagagacaaagatggtcgtgg  19550200                                                      ----------------->AGL1                                                      <-----------------AGL1--------->At4g35610                                                   --------->WRKY38(1)      --------->ZAT2                                                   ----------->HVH21        <---------ZAT2                                                   --------->WRKY12    <-------MYC3                                                 <---------At4g35610   ------->MYC2                                                 --------->ZAT2        <-------MYC2                                                 --------->At4g35610<---------ALFIN1                                               --------->TGA1a    --------->ANAC58                                          --------->ANAC46        <---------ALFIN1                         <---------------AGL15 ====================bZIP_DOF------->TEIL                         --------------->AGL15 --------->O2  --------->ANAC58       --------->ETT(1) ----------------->AGL1 --------->ANAC58   --------->ANAC58  --------->O2          ----------------->AG <---------ALFIN1--------->ANAC58                 -------  <---------O2          ----------------->AGL3 --------->ANAC58<------NtERF2<---------At4g35610 ------->HVH21          ----------------->AGL2<---------LBD16--------->ANAC46                ------->TEIL -ANAC58          --------->ARR11(3)    <---------ANAC58    --------->RAP2.6(3)         --------->CCA1(2) -ANAC58          <---------ARR11(3)    <---------ANAC58---------->DOF2------->MYC3     --------->At4g35610   tgacacttgtcggaaacagagctcttcccatatagagtcgtttcgagccacggctgaccaaagacggcacacacatgcagctgaacagagagatgaaccg  19550300             <---------GLK1(1)           <------ZmHOX2a(1)        <------NtERF2       --------->LBD16                      --------->At4g35610      --------->DEAR3(1)              <-------GAMYB <---------ANAC55(2)     <---------LBD16                 <---------MYB46(3)         --------->ZAT14              <-------     <------NtERF2                <---------MYB46(3)--------->ANAC46                         --------     --------->ATERF1(1)         <---------AtMYB61 <---------LBD16    <----------DOF2   <----------DOF2   <---------DEAR3(1)       <---------ANAC46<---------At4g35610 <---------ZAT18         <---------DAG2 -->DEAR3(2) --------->GLK1(1)--------->ALFIN1   <---------REM1(2)  <---------DAG2   <-----------GT1   tctagtcgccggaggatttcaacaagaacgtcgtggtggtcgttgatgctgaacacgggaacttggttcactctttgtctcttgttgttacttttctcga  19550400                    ------>NtERF2                   --------->ANAC46                   --------->ANAC58                   ----------->HVH21                   --------->ANAC58                   <---------ETT(2)         <-------MYC3                                                                      *TSS         ------->MYC3                                           ---------->DOF2            --------->bZIP60(1)        --------->ANAC46                               <---------ANAC46                    <---------GLK1(1)      <---------ALFIN1                          --------->ARR11(3)                   <---------MYB46(3)     -------->P  ------>NtERF2                  <---------ARR11(3)                 <---------At4g35610     <---------REM1(2)                ---------->DOF2  <---------ANAC58            --------->At4g35610 --HSFB2a(2)    --------->DEAR3(1)--------->ANAC58     <---------ANAC58            <---------ZAT2 ->HSFB2a(2)    ----------->HVH21 --------->ANAC58 <----------DOF2         <---------WOX13(1)   ccatgcctacacgtttctccgacgacatggtgaaccaagaaaaagagagagaactttgtgtgtgttcaaagagagagattgatacagctgttgatatcac  19550500                                     <---------ANAC58                    <---------AHL20(2)                    --------->AHL20(2)                  <-----------TBP    <---------ANAC58             <------ZmHOX2a(1)   ----------->GT1           --------->ZAT6            <---------ANAC46          <------ZmHOX2a(1)------------>CBF         <-----------GT1         <------------CBF  --------->At4g35610      <---------AHL20(2)    ---   acgggcacatataactctatatttatatgtgtgtatattgtgtgtaagtgagaagcagagagagaggaggagtgatgttttattcaatctgtaaaaagaa  19550600                    <---------MYB46(3)                    <------MYB83                    <------MYB46(1)                   <---------AtMYB61                   <---------DEAR3(1)                   --------->ALFIN1                 <---------ANAC46                 <---------ANAC58                 <------MYB83                 <------MYB46(1)                 <---------ANAC58                <------MYB46(1)                <------MYB83                --------->MYB111(1)                <---------MYB46(3)                --------->MYB55(2)              <--------P             <-------GAMYB             <---------ANAC58             <---------ANAC46             <---------ANAC58            --------->MYB52(2)            <---------MYB46(3)            --------->MYB55(2)            --------->ATHB12                                   ---------->ID1            <------MYB83                                   <---------ANAC58           <---------AtMYB61                               <---------ANAC58        <-----------RAV1(1)                                <---------ANAC55(2)       <---------TOE2(3)                                   <---------ANAC55(1)     <---------AHL20(2)                               --------->YAB1    --------->AHL20(2)  <---------ANAC58              <---------ICU4    <---------AHL20(2)  <---------ANAC58  --------->TOE2(3)<---------ANAC46    --------->AHL20(1)<---------ARR14(2)  --------->TOE1(3)--------->ANAC55(2) ---------->DOF2 ------>YAB1<------MYB46(1)     <----------DOF2      <---------YAB1 <----------DOF2                 <   taaaaatttaatgttggttgggtggttcttgtttctttttaaaaccttagtatatatcattacttgttgtctttttgttttaaaagctattggtagaaca  19550700                                                                                   <---------------AtSPL8                                                                                  <---------ANAC46                                                                                 --------->SPL7                                                                                 ------->TEIL                                                                               <---------SPL7                                                                               --------->TOE2(2)                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                             --------------->AtSPL3                                                                            ------>MYB46(1)                                                                            ------>MYB83                                                                            <------------------SPL14                                                                            --------->MYB52(1)                                                                           --------->MYB55(1)                                                                          <---------MYB111(1)                 <---------ANAC58                                         <---------MYB59              <---------MYB52(1)                                          <---------MYB52(2)             <-------GAMYB                                                <---------MYB46(2)            --------->MYB52(2)                    <---------YAB1         <---------ANAC55(2)            <---------ANAC58               <----------DOF2               --------->ANAC55(2)            <---------ANAC58           <----------DOF2         --------->MYB52(1)<-------TEIL -----------GT1  <---------ANAC58   <-----------GT1  ------>ZmHOX2a(1) <-----------GT1 <-------TEIL   tataactatttgtttcgttgcttcactaatcttacatataactttcttttttatcctagtatgaccaatggaattacctaacgtacgggtacaaaactat  19550800                  ---------->DOF2                                         <---------ZAT6              <---------WOX13(1)                                       <---------ATHB12            --------->ATHB12                                        <---------------AGL15        -------->ATHB1                                              --------------->AGL15        <---------ICU4                                             ----------------->AGL3        <--------ATHB1                                             ----------------->AG        --------->ATHB51                                           =================================MADS_MADS        --------->ATHB12                                           <-----------------AG       <---------YAB1                                              <-----------------AGL3       <---------ATHB12                                            <-----------------AGL1       <---------ATHB51                                            <-----------------AGL2       --------->ICU4                                              ----------------->AGL2       <<<<<<<<<<AGL24                                             ----------------->AGL1       <<<<<<<<<<AGL20                         --------->TOE2(3)  ------>MYB83                     --       <<<<<<<<<<AGL22               --------->YAB1          <-----------GT1                       <-    ------------>ATHB5            --------->YAB1 ---------->DOF2  ------>MYB46(1)   <---------------AGL15   tttcatccaattattgattgaaaaggaattggatactaatagtaatctacataaatcgaattgataccttccaatagtggaaaatgctattttgagagta  19550900                                               <---------YAB1                                           --------->AHL20(2)                                           <---------AHL20(1)                                           <---------AHL20(2)         <---------At4g35610               --------->AHL20(1) ------->AHL20(2)         <---------ANAC58 <---------ARR11(3) --------AHL20(2)         <---------ANAC58 --------->ARR11(3)              ----------->GT1    <------   tttatttatggagatgagaagaatgtttacgtccaagtagtggaatatattgatagctctaaaatcaactaattgaagagaaacaaattagaaagatgca  19551000  Previous    Next  AGI:  At5g48170.1    Description:  SLY2 (SLEEPY2). Identical to F-box protein SNE (SNE) [Arabidopsis Thaliana] (GB:Q9LUB6); similar to SLY1 (SLEEPY1) [Arabidopsis thaliana] (TAIR:AT4G24210.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67350.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 19549763    to: 19550491    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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