Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------AHL20(2)                                                                                    --------->AHL20(1)                                                                                  <---------AHL20(1)                    --------->ANAC58                                              --------->AHL20(1)                    --------->ANAC58                                             --------->AHL20(2)              ------>ZmHOX2a(1)                                        <-------GAMYB<---------AHL20(1)             --------->TOE2(3)                                        <---------MYB46(3) <---------AHL20(2)      --------->ARR14(2)                   ------>ZmHOX2a(1)          --------->MYB55(2) --------->AHL20(2)      <---------ARR14(2)              <---------GLK1(1)  --------->ANAC55(2)   --------->AHL20(2)   tatgagcgaattcttcctaagtaagcaatacagtacttcgatttcctctcttgattttctcgtaatgtacgatggttgcaaaaatatatatttatattcg  19532900                                   <---------MYB59                                  <---------ANAC55(2)                                  --------->ANAC55(2)                         <---------ANAC46                      <---------YAB1                        <---------TOE1(3)                    --------->YAB1                        <---------TOE2(3)                   <---------YAB1                       <---------DOF5.7(2)           ----------->GT1                       --------->MYB52(1)            ------>ZmHOX2a(2)                  --------->AHL20(2)                <------ZmHOX2a(2)                  <---------AHL20(2)               --------->ARR14(2)   <-----------TGA1              <---------YAB1    <-----------GT1    <---------ARR14(2)   <-----------HVH21<--------P           <---------ATHB12 ------->TEIL           <---------ARR11(3)  --------->ANAC46----------->GT1   tagaaatactcaaatcactattaattaacgtatattacataactcgaagaccagatcgtaacatcataaataagcgtcaccaaaatgtctggttagaact  19533000                                        --------->ALFIN1                       ----------->GT1                                    ---------->DOF2                         <----------ID1                      <---------AtLEC2  <-----------RAV1(1)              --------->DAG2      --------              <---------ZAT6    ---------->DOF2                         ---------->DOF2     <--------           <-----------GT1  ---------->DOF2   ----------->GT1<-----------RAV1(1)       ----------->GT1   atttagagtcttgttacagttaatgcatgaaaaagaaagaaagtgttggagtaaaaaacaaaaatgttgttgaaaaaagcgaagaaaaaatgttataata  19533100                                                                                               ======                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              -------                                                                             --------->At4g35610                                                                             <---------At4g35610                                                                      ===========================bZIP_DOF                                                                      <----------DOF2         <------                                                                  ------>ZmHOX2a(2)           -------                                                                 <------ZmHOX2a(2)            -------                             <---------ARR14(2)                 --------->AGP1            <---------ZAT18     <-----------GT1         --------->ARR14(2)                 --------->ARR14(2)     ============== --------->ARR11(3)   <<<<<<<<<TAC1                             --------->ARR14(3)     <---------TGA1a <---------GLK1(2)  --------->ZAT6                              <---------ARR14(2)     --------->TGA1a <---------ARR11(3) <---------ALFIN1                            <---------ARR11(3) <---------ALFIN1 ->YAB1            --------->ZAT14                              --------->ARR11(3) --------->ZAT6 -YAB1  <-----------GT1     <------ZmHOX2a(1)                   <---------ARR14(3)--------->ZAT14----   caagatttttcaactcttctcaacactcgaggaacgtcgtcttcaacttcttgccttgaattttgagatcttctttttgagctcaacactcgtgcgcatc  19533200         ------>MYB46(1)         ----------->RAV1(1)         ------>MYB83       --------->MYB46(3)       <---------MYB59   --------->WRKY45   --------->WRKY12   --------->WRKY38(1) <----------DOF2 ====================RAV --->At4g35610                              --------->ANAC58 ----->RAV1(2)                    <---------ANAC58 ----At4g35610                    --------->ALFIN1 >TEIL--------->ANAC46   <---------ARR14(2) --------->AtLEC2 ---ARR14(2)             --------->ARR14(2) --------->ANAC58 -->GLK1(2)             <---------CCA1(2) <---------AtLEC2            --------->ATHB12 -->ARR14(2)<---------ARR11(3)    <---------ANAC58                  <---------TOE2(3)              <- ===========bZIP_DOF--------->ANAC58  <---------ANAC58     --------->YAB1                  ---------- ------->HVH21      --------->ANAC58  <---------ANAC58    <---------YAB1               >>>>>>>>>MYB2   tgactttgacccaacatctactacgcatatatgtgtgtgtgcctgcatgcaagtagccatattatagtttaatgtttgataaaaacgaaaaccaaaagaa  19533300                             ------>ZmHOX2a(1)   <<<<<<<ZML2                             ======================HOX2a_HOX2a                            *TSS              --------->HSFB2a(2)                         <---------ZAT18      <---------HSFB2a(2)                        <---------ANAC58      ------>ZmHOX2a(1)                        <---------ANAC58    ------>ZmHOX2a(2)                    ------>ZmHOX2a(1)       ===========================HOX2a_HOX2a                    ===============================HOX2a_HOX2a                    ==============================HOX2a_HOX2a                   --------->TOE1(3)       ============================HOX2a_HOX2a      <----------DOF2             --------->ARR14(2)            <------ZmHOX2a(2)                      --------->ANAC55(2)             <-----------ARR10            --------->ARR14(2)                      <---------ANAC55(2)             --------->ARR11(3)           <---------ARR14(2)                      --------->ANAC55(1)             <---------ARR11(3)       <---------LBD16                             --------->ANAC58             <---------ARR14(2)      <---------ANAC58                             --------->ANAC46   <----------DOF2 --------->TOE2(3) <---------ANAC58 <---------DAG2       --------->ANAC46 ---------DOF2--------->HSFB2a(1)    <---------ANAC46 <----------DOF2     --------->LBD16    <<<<<<<< >DOF2      <---------CCA1(2)=====================HOX2a_HOX2a   ------>ZmHOX2a(1) --------->ANAC58   actttctttttctcaaatcttccttagcgtcctcttgtttcgtggatcctagaaccctttttcttcctcttcaatccccaaaacacgcaactttcttctt  19533400                >>>>>>>>>TBF1     <---------AHL20(2)     <---------YAB1                                     =============================================    --------->AHL20(2)                                  ----------------->AG    --------->AHL20(1)                              --------->YAB1    <---------AHL20(1)             ------>MYB83  --------->YAB1             <---------DAG2          < --------->AHL20(2)                ------>MYB46(1) <---------YAB1           <----------DOF2         - <TBF1--------->YAB1         --------->MYB46(3) <-------TEIL             <-----------GT1     <-------   caaaaatataatagtgaagaagaataaatgaacgaccaaatgtctccagtttcatcataccatattggttttgatatactttatctacttagttttcaca  19533500                                                    ------>NtERF2                                                  --------->ATERF1(1)            <--------ATHB1                        <------NtERF2            <---------ICU4                       <---------RAP2.3(1)            --------->YAB1                       <---------ATERF1(1)            <------------ATHB5                   ------>NtERF2           --------->ICU4                       --------->DEAR3(1)           <---------ATHB51                     <---------DEAR3(1)       --------------->AGL15                  <---------ATERF1(1)                     <----------DOF2      --------->ANAC46                        <-----------HVH21                      <---------DAG2 ======================MADS_MADS            --------->SPL7                    --------------->AtSPL3 ---------AHL20(2)                   --------->KAN4(1)<---------ALFIN1        --------->ZAT6 -------->AHL20(2)                   <---------MYB46(3)                       --------------->AtSPL8 ----GT1   <---------ATHB12          <---------HSFB2a(1)      --------->GLK1(1)   <---------ZAT18----   atttatatactcaataatggaaactttcagcctcaaggattgttcgtccgtcgcctccagcccgatttcttctccaaatatcagtacccttttgaaaatc  19533600                                      <---------TGA2(1)        --------------------->WRI1    --------->TGA2(1)       <---------ANAC58               <---------bZIP60(1)        <-----------RAV1(1)       <---------ANAC58     <---------ARR11(3)     --------->GLK1(2)<---------REM1(1)      <---------ANAC46    <----------DOF2         --------->ARR11(3)     <---------ARR14(2)                 ------->TEIL --------->ARR11(3)         --------->ARR14(2)     --------->ARR14(2)                 <-----------GT1 <---------ARR11(3)         <---------ARR14(2)<-----------GT1<---------YAB1   --------->ANAC55(2) ------>DOF2     ------->TEIL         --------->bZIP60(1)  -------->ATHB1     <---------ANAC55(2)   aaagttctttcttggtatgaatctcaagactatcttcgtgatgtcatataacaaatctgaattattcatgttgtagacttatgtaatgtaactgtgtgtg  19533700                                 <-----------HVH21                                 <-----------TGA1                                 ------------------>SPL14                                <---------TGA1a                                --------->bZIP60(2)                                --------->O2                                             <---------YAB1                                --------->TGA1a                                       <---------YAB1                                --------->ANAC46                                      --------->ICU4                               --------->LBD16                                      <---------ICU4             ---------->DOF2  --------->ANAC46                                      --------->YAB1             <---------ZAT14 <---------LBD16                                        -------->HAHB4             =============================bZIP_DOF                    --------->TOE2(3)-------->HAHB4         <------ZmHOX2a(1) <---------REM1(2)                          --------->TOE1(3)--------->YAB1      <-----------RAV1(2)  ===============MYC_MYB                  <-----------GT1 --------->ICU4   ----------->HVH21       -------->P                             <-----------GT1  <---------ATHB51  <-----------HVH21      <---------ETT(2)              ----------->RAV1(1)    ----------->GT1  <-----   tgtgtgtcacaggagtaaagagaccggtctacccgcgtcagtacatgttcgagtttgcaacaagagttttaaccttcacaaggtaataatgataatcaaa  19533800  Previous    Next  AGI:  At5g48130.1    Description:  phototropic-responsive NPH3 family protein. similar to signal transducer [Arabidopsis thaliana] (TAIR:AT5G67385.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41205.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210); contains InterPro domain BTB/POZ; (InterPro:IPR013069) Range:  from: 19533328    to: 19535739    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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