Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------------AGL15                                                                                  --------------->AGL15                                                                       --------->LBD16<-----------GT1                                --------->TOE2(3)                     <---------HSFB2a(2)                           --------->DOF5.7(2)                        <-----------RAV1(2)            <---------ZAT2--------->TOE1(3)                  <---------YAB1 --------->At4g35610            --------->STY1(2)  --------->YAB1              --------->YAB1   <---------At4g35610            --------->ZAT2--------->TOE2(3)              <----------DOF2--------->ANAC46 ----------->GT1            <---------STY1(2)<---------DOF5.7(2)        --------->TOE2(3)<------ZmHOX2a(1)--------->At5g28300       <-----------GT1  ------->TEIL                  ------->TEIL    <---------LBD16 --------->MYB52(1)       --------->ZAT6   <---------TOE1(3)      <----------DOF2      --------->WRKY18(1)<---------At5g28300   gtgatgttttcactagctcggttttgaacgttaacataaatagtgtctcctttgtgaacctttataatcggtccaggaaactgactattaacggttaaaa  19509600                                               --------->AHL20(2)                   <---------ANAC58           <---------MYB52(1)                   <---------ANAC58    ----------->RAV1(2)                     <---------TOE2(3)                   <---------ANAC46   -------->P    --------->MYB52(1)        ---------->DOF2           <---------ALFIN1       --------->HSFB2a(2)<---------TOE2(3)    --------->WOX13(1)          <---------ZAT14     <---------HSFB2a(1)   <---------DOF5.7(2)  --------->AHL20(2)   -------          <---------REM1(2)   --------->HSFB2a(1)   <-----------GT1     <---------ATHB12      -------    <---------ANAC58  --------->ARR14(2)  ------>MYB83     <---------AHL20(2)--------->YAB1   -------    <---------ANAC58  <---------ARR14(2)  ------>MYB46(1)  --------->AHL20(2)--------->AHL20(2)   tcgccttcgtgctacacagtttcgtatatggaacttccctaacctgccattaattaacgattttattagttttaatcaattaaagtttgtttactcacgc  19509700                         --------->LBD16                        <---------ANAC46                                                           --                      -------->P                        <---------REM1(1)         --------->AHL20(2)       --------->MYB52(1)--------->At5g28300         <-----------RAV1(1)          <---------AHL20(1) -->ANAC58            <---------At5g28300 --------->ANAC58                    <------ZmHOX2a(1)  ---- -->ANAC58      <-----------GT1           --------->ANAC58       ---------->DOF2  --------->AHL20(1) -->ANAC46     <---------AHL20(2)         --------->ANAC55(2)  <------ZmHOX2a(1)  <---------AHL20(2)   ccaattgactaactaatttaaacttaccgtgaatgtatagtgatgcgcaatgcaattgttgtagaggaaaagagagattaggaataaattgaagaaggaa  19509800                               <---------At5g28300                              <-----------GT1                          <---------AHL20(2)                          --------->AHL20(2)                         <---------AHL20(2)                                     <---------AHL20(2)                         --------->AHL20(2)       ---------->DOF2           <---------AHL20(2)       <---------HSFB2a(2)--------->AHL20(1) <-------TEIL              <-------TEIL    <---------ANAC55(2) --------->HVH21      <---------AHL20(2)<---------ZAT14            --------->ARR14(2)  --------->ANAC55(2) ------->GT1       ----------->GT1 ----------->HVH21               <---------ARR14(2) <-------TEIL   tgtgacattttggaagagttttagtaaattaattaccctgactgaagttcatcaaagaatagagaggcatatatacatatattttatatacgtatagaga  19509900                          --------->CCA1(2)                         <---------ARR14(2)                         --------->ARR14(2)                <-----------GT1             ----------->GT1      --------------->AGL15                                           *TSS                         --      <---------------AGL15                                       --------->YAB1                   <-     <-----------------AGL3                                     --------->ANAC58                   <-  <----------DOF2<-------TEIL               <-----------GT1     --------->ANAC58    <---------MYB52(1)   ccgtctttctcaaattagttacattcggatataagaattttgtattttacaaaatatgttttcggtaagcatcatcttcttggtccgttttgactaatga  19510000                                       --------->ANAC58           ---------->DOF2                                       --------->ANAC58           --------->ZAT14                                   <---------WRKY38(1) <---------TOE1(3)                             <---------ANAC58         --------->MYB52(1)                     <-------                             <---------ANAC58<----------DOF2   ----------->GT1               --------                   <-----------GT1--------->WRKY18(1) <---------DOF5.7(2)                    <------- ------->ZAT18    --------->AHL20(2)   --------->ANAC46<---------TOE2(3)                    --------- --------ZAT18    <---------AHL20(2)  <---------------------WRI1  <---------ZAT14   --------->ZAT6 --------ZAT14--------->AHL20(2) <-----------HVH21  --------->DOF5.7(2)         <---------MYB59     <   gttcacattcccacaaatatttaactacatttcttggtcaaacgaaactttcaagttaacgaaaacagtaaagtcgtatttatctaactctagattatat  19510100                              ----------->HVH21                             <-----------HVH21                            <---------ANAC58                            --------->ANAC55(2)                            <---------ANAC58                            <---------bZIP60(2)                            ----------->GT1                            =======================================bZIP_DOF                            =======================================bZIP_DOF                            --------->O2                            <---------O2                            <---------ANAC55(2)                            --------->TGA1a                            <---------TGA1a                            --------->bZIP60(1) --AHL20(2) --------------->AGL15      <---------ATHB12 ->AHL20(1) <---------------AGL15    --------->WOX13(1)                  --------->AHL20(2)    ------ --AHL20(1)----------------->AGL3--------->bZIP60(1)                --------->AHL20(2)       <<<<<<<< >AHL20(2) ----------------->AGL2<---------bZIP60(1)          ---------->DOF2       <---------YAB1 -----------GT1             <---------bZIP60(1)         <----------DOF2  <---------AHL20(2)  <-------   tttcacatgttatatcatatatagtaagagacgtgacatcaatcaactagttcaaagtctttactaaagataaaataaaatcacttatgagttttgttag  19510200                              ----------->RAV1(1)                                   <-------TEIL   --------->YAB1            <---------ALFIN1          <---------ANAC46          <---------ANAC58   <---------ICU4           -------->P                 <---------ANAC58          <---------ANAC55(2)  <---------ATHB12          ------>MYB83               <---------ANAC55(1)       <---------ANAC58 --------->ANAC58           ------>MYB46(1)            --------->ANAC55(2)       <---------ANAC46 --------->ANAC58          ----------->RAV1(1)         <---------ANAC55(2)       --------->ANAC55(2) --->MYB59<----------DOF2--------->MYB46(3)            <---------ANAC58          <---------ANAC55(1)- <MYB98  --------->TOE2(3)--------->AtMYB61         <---------MYB52(1)       <---------ANAC58       - --MYB52(1)     <---------AHL20(2)          --------->LBD16    <---------ZAT6<---------ANAC58       <   gccaagcattacctttattttatataaaccaacaccagaaatattccgaaactcgttacgtttttgtgttaatttagtttcttacgtgcatagtttacat  19510300                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                      --------->ANAC55(2)                                                                                      <---------ANAC55(2)                                                                                     <---------TOE2(2)                                                                                     <-------TEIL                                                                                     ------->TEIL                                                                                     <---------TOE1(2)                                                                                   --------->TOE1(2)                                                                                   <---------SPL7                                                                                   --------->TOE2(2)                                                                                  <---------ANAC58                                                                                 --------------->AtSPL3                                                   -------->P                    <---------------AtSPL3                                                --------->At4g35610          --------->ANAC58                                                <---------At4g35610          --------->ANAC55(1)                                                <---------ZAT2               --------->ANAC55(2)                                                --------->ZAT2               <---------ANAC55(2)                                            <------NtERF2               <---------------AtSPL3                                           <---------LBD16             --------->REM1(1)          <---------AHL20(2)              <---------ANAC46            <-------TEIL<---------ANAC58         <---------AHL20(2)               <---------LBD16       ---------->DOF2 --------->MYB52(1)         --------->AHL20(2)               --------->ETT(1)   ------>NtERF2   --------->ANAC58 <------ -------->ZAT18                          --------->ALFIN1   --------->ANAC58 --------->ANAC46<------- -------->ZAT14                        <-----------RAV1(1)  --------->ANAC58------->TEIL     <------- ---------ZAT14           <---------YAB1<-----------HVH21   --------->ANAC46<-------TEIL     <-------   tgttcactgaattaaatgaaaacgagttatcatctaattagatgtcggggagctaccattccacgccaaagctacatgtacgtaacgtacgtattaacgt  19510400               ------>ZmHOX2a(1)        <---------TOE2(3)                                     ---------->DOF2--------->ARR11(3)        <---------YAB1                         --------->HSFC1(2)            <---------ARR11(3)        <---------TOE1(3)                      <---------HSFC1(2)    --------->ANAC58 <---------GLK1(2)        <-----------GT1    --------->ARR11(3)      --------->ANAC58 ---ANAC46     --------->LBD16         ---------->DOF2       --------->AHL20(2)                  <--- --TOE2(3) --------->GLK1(2)         --------->ANAC46    --------->ZAT6---------->DOF2   <---------YAB1 --TOE1(3)<---------GLK1(2)        <-----------GT1       <---------------AGL15      <----------DOF2 ----------------TaNAC69(2)  <----------DOF2 <---------ARR11(3)    --------->MYB52(1)    <---------AHL20(2)   atagaattttaagattcctgaaaacaattttctttttttacgaaagagatgtttcgctaacaataaaagaaacgaaagagatgtttcttttttaattgtt  19510500  Previous    Next  AGI:  At5g48100.1    Description:  TT10 (TRANSPARENT TESTA 10); laccase. Identical to Laccase-15 precursor (TT10) [Arabidopsis Thaliana] (GB:Q84J37;GB:Q9FI28); similar to LAC14 (laccase 14), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G09360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68827.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; (InterPro:IPR001117); contains InterPro domain Multicopper oxidase, copper-bindin Range:  from: 19506553    to: 19509970    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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