Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <------MYB83                                                  <------MYB46(1)                                                <---------MYB55(1)                                               <---------MYB52(1)                                             <---------ANAC58                                       <---------ANAC58                                <---------ANAC55(2)                                          ------>ZmHOX2a(1)                                --------->ANAC55(2)                                         ---------                              <-----------GT1<---------ANAC58  <---------ZAT2   <---------YAB1    <---------CCA1(2)  ----------->GT1 <---------ANAC46        --------->At4g35610          --------- --DOF2             <------ZmHOX2a(1)  <---------ANAC58        <---------At4g35610    <---------YAB1   tctctcttatcttcgttggaaaggattgtttattacatatttcttgtgcgtttggttctaatgagagctgaactatatgactatgagtctgattccttag  19502100                              <---------ANAC46                              <---------ANAC58          <---------AHL20(2)                              <---------ANAC58        <----------DOF2       <----------DOF2    <----------DOF2--------->CCA1(2)    <---------ANAC58 >TOE1(3)            <-----------GT1    --------->ARR14(2)    <---------ANAC58 >TOE2(3)         <---------ICU4        <---------ARR14(2)   --------->ATHB12   cttctaatacttttgtttcatttttgctctttgtgtgtttcagatttgagagtcttcttttattgagtggctacttgagaattcagaacacatattagtt  19502200                                                                                           <---------LBD16                                                                                           --------->LBD16                      --------->ANAC58                                                   <---------LBD16                      --------->ANAC58                                                 <---------ARR14(2)                     --------->DAG2                                                 <---------ANAC58                    ---------->DOF2                                  <---------ANAC46  --------->ARR14(2)                --------->YAB1                                   <------------CBF   <---------ANAC58             --------->WOX13(1)                                <---------AHL20(2)   --------->ANAC55(2)            <---------AHL20(2)                              --------->ATHB12        <---------ANAC55(1)            --------->AHL20(2)              <---------At5g28300--------->AHL20(2)   <---------ANAC55(2)           --------->AHL20(2)              <-----------GT1 <---------YAB1     <---------YAB1   tagaaggaatcaaattaatcagaaaagcaactctcatttgtatattcactgcttctccttgatgatttattgtgtagtttttgattacgtttctggggaa  19502300                ------>MYB46(1)                --------->MYB52(1)                ------>MYB83                                       <---------ANAC58           <---------ALFIN1                                     <----------DOF2      --------->ANAC46        --------->ARR11(3)               <---------DAG2      --------->ANAC58  ----------->GT1           <----------DOF2  <---------ANAC58       <---------AHL20(2)      --------->ANAC58 --------->ALFIN1           --------------------->WRI1<----------DOF2     <----   gacatcacaaacaacacctatcgaagtggtaagacctagttagaagtggtttctttgttctcccccctttcttgctctcttttctagtgagtttaattct  19502400                            ------->GAMYB                           --------->DEAR3(2)                           --------->MYB46(3)                         ----------->RAV1(1)                   <---------HSFB2a(1)                                                         <-----                   --------->HSFC1(2)                                                    <---------At4g35610                   --------->HSFB2a(1)                                                   --------->At4g35610                   <---------HSFC1(2)                                               <---------YAB1                  --------->ARR14(2)                                             --------->GLK1(2)        <-----------------AGL1                       ------------>CBF            <---------ARR14(2) <----------DOF2 <------ZmHOX2a(1)        <---------GLK1(2)                      --------->ARR14(2) ------DOF2    <---------TOE2(3)          <---------ARR11(3)     <------ZmHOX2a(1)  ----------->HVH21   tttcttttttttctcttaaggaacttccaacagaccatctacaagatgctcagacaccaatggaacaggactccattgttgagaatatgacagatgagga  19502500                  --------->ICU4                  <---------YAB1                --------->YAB1     <---------At4g35610     --------->At4g35610    ----------->RAV1(1)                                                            <-----------RAV1(1)    XXXXXXXXXXXXXXXXXXXX>MIR834  ----------->RAV1(2)                      <-------GAMYB  <---------At4g35610           --------->ARR14(2)                       <---------MYB46(3)    ------  --------->At4g35610           <---------ARR14(2)              <<<<<<<<<<<<<<<<<LFY           ------ -ZmHOX2a(1)   --------->ICU4   ------->TEIL  ------>ZmHOX2a(2)----------->HVH21   <---------ANAC46<-   aaacagcagcagtagcgatgatgattctgaggcgaacctgcagtttgatccagtatgttctatttgtgacaatggtggttatgttctgtggtatgtcaag  19502600                                      ------>ZmHOX2a(1)                                 <---------GLK1(1)                                 <---------At4g35610 --->ANAC58                  <---------HSFB2a(2)                  <---------YAB1                   <- --->ANAC58                  --------->HSFB2a(2)             <---------AHL20(2)                    <- ------TEIL                  --------->HSFC1(1)             --------->AHL20(2)                     <-   cttcatagtttcttaagagttgatgctacttctagagctccttacaaactgcaacgatttcatttaatctcattgttttgaactcagttgtgaaggaagt  19502700                    --------->AtMYB61                    --------->TOE1(3)                    --------->TOE2(3)                    --------->YAB1                   --------->MYB46(3)                  ------>MYB46(1)              --------->AtLEC2        <----------DOF2       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     --------->AGP1<---------ATHB12     <---------ARR11(3) --------->At4g35610                       --------->YAB1                   <-     --------->ARR11(3) <---------At4g35610                <---------ARR14(2)                      -- --------ANAC58   -------->P                               --------->ARR14(2)           ----------->GT1 --------ANAC46   ------>MYB83                            <------ZmHOX2a(1)             <---------ZAT6 --------ANAC58--------->MYB46(3)                 <---------ARR14(2)              <---------------AtSPL8   tgcttgagatctttccatccaaccatagctgatggaattgagacagagtgcgaatcgctaggattcactgataagactcaaattcaggtactgtgaatca  19502800                                                           <---------ANAC55(2)                                                      --------->MYB52(2)                                                      ----------->GT1                                                      <---------MYB46(3)       --------->GLK1(2)                          <------MYB83                             --------->ICU4 ---------DOF2          <---------ATHB51          <---------MYB46(3)           <---------MYB59 ------->TOE2(3)        --------->ICU4            <------MYB46(1)             ----------------->AGL1-   actttagagtttctgttcaatatgcgattatggtgaggcttcatgctgaagttggtttgttacatatgtaggcactcgggacctatttgtgtaacaattg  19502900                                           ------>ZmHOX2a(1)                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                                       <---------ARR11(3)                                 <---------ARR14(2)                                 --------->ARR14(2)           ----------->RAV1(1)<---------ANAC58         --------->At4g35610  <---------ANAC58                                                   ----       --------->ANAC46       <---------ANAC46--------->At4g35610                                <---     <-----------GT1 <---------YAB1    --------->ARR14(2)                                    <-------TEIL --------------->AGL15 <---------ANAC58<---------ARR14(2)                              --------->ARR14(2) ---------------->AGL3 <---------ANAC58--------->ARR11(3)             <---------YAB1   <---------ARR14(2)   tctctataaacagcaccagtgctatgcttgtggcgaattgggatcctctgatgaaaatttctctcaacaggtatgatatacttgcaccatatatgtgcat  19503000  Previous    Next  AGI:  At5g48080.1    Description:  similar to EDM2, transcription factor [Arabidopsis thaliana] (TAIR:AT5G55390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23988.1) Range:  from: 19501391    to: 19502198    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g48090.1    Description:  ELP1 (EDM2-LIKE PROTEIN1); protein binding / zinc ion binding. similar to EDM2, transcription factor [Arabidopsis thaliana] (TAIR:AT5G55390.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61366.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38872.1); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) Range:  from: 19502460    to: 19505609    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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