Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                          <----------DOF2                        <---------YAB1                      <---------WOX13(1)         --------->ARR11(3)                       <---------AHL20(2)              <-------GAMYB                   <---------ARR11(3)                       --------->AHL20(2)             ----------->GT1                 <------MYB83           --------->ANAC55(1)                        <---------MYB46(3)              <------MYB46(1)           --------->ANAC46                          <---------YAB1                  --------->MYB59           --------->ANAC58                       <---------YAB1                --------->ICU4      < ------>GT1--------->ANAC58      --------->YAB1   --------->ICU4                <---------YAB1-------   gagaaaacaaaacacgaaattcgattaaaattgaatcacaatcgagagagtgatgatggttaattgaagaaacctgatagtgaagattaggtctttgttg  19481800                                                                                                 <---                                                                                                 ----                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                 <---------ARR14(2)                                                                                 <---------ARR11(3)                                                                     --------->ZAT18             ----                                                                    --------->ANAC46             <---                                                              <---------ANAC58   --------->ARR11(3)                                                          <---------MYB52(1)     <---------ARR14(3)                                                         <-------GAMYB ----------->RAV1(1)       <---                                       --------->YAB1   <---------MYB46(3)       --------->GLK1(2)                             --------->AHL20(2)         ===============================HOX2a_HOX2a              <-----------RAV1(2)<-----------GT1        ------>ZmHOX2a(2)        --------->ARR14(3)          <---------ATHB12  --------->AHL20(2)          --------->MYB52(2)       --------->ARR14(2) ---RAV1(1)--------->YAB1   --------->ICU4        ------->TEIL<---------ANAC58  <------ZmHOX2a(1)---- ---------ATHB12            <---------ATHB51 --------->WOX13(1)     --------->ANAC58         -------- --->ID1  --------->ICU4    <---------AHL20(2) <---------ATHB12     --------->ANAC58<----------DOF2 <   caatcgtttgaaatcatcaggtttttcgaaataattttccatcatatcaatgaatcgatcgttgtcttgagcgcaacatcgaggatctttaacaatgaga  19481900                                                        ------>ZmHOX2a(1)                           <                              --------->ETT(1)         <---------MYB59                           ----        <----------DOF2  --------->O2                 ------>ZmHOX2a(2)                          ----   <---------MYB52(1)    <---------TGA1a             <------ZmHOX2a(2)                        ------>ZmHOX2a(2)  --------->LBD16        --------->TGA1a       --------->ARR14(2)                            <------ZmHOX2a(2) ------ZAT2              <---------O2          <---------ARR14(2)                            -------- ----->GLK1(1) --------->ARR14(2)        <---------HSFB2a(2)                                <-------- ----->ZAT2 <---------TOE2(3)--------->RAP2.6(3)    <---------ARR14(2)                      --------- ------GLK1(1)<------ZmHOX2a(1) <------NtERF2  <---------AGP1                               <-------- ------At4g35610 ------>ZmHOX2a(2)  --------->ATHB12--------->ARR14(2)                      --------- ----->At4g35610<------ZmHOX2a(2)  <---------YAB1------>ZmHOX2a(2)  --------->LBD16         <-------- ->YAB1 ===========================bZIP_DOF  ----------->ARR10    <---------LBD16           --------- ---------LBD16<---------ARR14(2)  --------->ICU4==============HOX2a_HOX2a                  <--------   gctccggtttcttttaggatccgactcacttgtcggcatgattcgagtagatcggatcctaattcatcaccggagaagtcgaggtaactagacagatcta  19482000    <--------P  ----------->GT1 <---------MYB46(3) ---------ANAC46 ------->HVH21 ----->ANAC46                                                        <-----------RAV1(1) ->CCA1(2)                                                        <---------MYB46(3) -ARR11(3)                                                      <-------GAMYB >ARR14(2)                    <------ZmHOX2a(1)                <-----------RAV1(1)                <-- ---ARR10             ---------->DOF2                        <---------ANAC58                     <-- >ARR11(3)        ----------->RAV1(1)             <---------ARR14(2) <---------REM1(1)            <-- -ARR14(2)       <---------ETT(1)                 --------->ARR14(2) <---------MYB46(3)          ---- >AGP1          --------->DEAR3(2)         ----------->HVH21 <---------ANAC58               <-------- -AGP1         <---------At5g28300     <---------ZAT14       <---------ANAC46        <------ZmHOX2a(1)   cgacgggtaactccatttaccgacaaaagagaggaagggacagtagtgaccagttctgtagttgtgtgttgttgttgcagtggtataggagtttgagatt  19482100                                                                                                <----                                                              <----------DOF2                   <----        <-----------GT1                                       <---------------AGL15          <-------     --------------->AtSPL8         --------->ANAC46          --------------->AGL15    <---------ARR14(2)   <---------ARR14(2)               --------->ANAC58       ------->TEIL                --------->ARR14(2)   --------->ARR14(2)               --------->ANAC58      <---------CCA1(2)            <---------ARR11(3) -------ANAC46   <---------TOE1(2)<---------ALFIN1   --------->ATHB12                 <---------HSFB2a(1) -------ANAC58<---------ANAC58   <---------ZAT18     <---------ICU4                  ----------->ARR10 -------ANAC58<---------ANAC58 --------->ANAC58     --------->ICU4                 <------ZmHOX2a(1)< ----->ATHB12 <---------ANAC46 --------->ANAC58     <---------YAB1                 *TSS--------->ARR11(3) -TOE2(3)------->TEIL          --------->ANAC46   --------->YAB1   <---------YAB1<---------TOE2(3)  -   gagtggatttgtaccttcgtgtgttctatgtataccccactccattgttcattcatcattgtatcttttatgagaaaattgttgaggaagatttgttact  19482200     ----------->GT1   ---------->DOF2 -----DAG2 ------DOF2 ----GT1  --------->ICU4                ----------->GT1 ---------HSFB2a(2)                   <------------CBF                         ---------->DOF2 -------->HSFB2a(2)           ---------->DOF2                  <---------AHL20(2)             -------   ttttagaaagtaatattcaaactttgaaaaaaaaaaggaatattgaaaatttgaaatagttctattttttttttttttttgtaaagtcaacatatgaatc  19482300                       <------NtERF2                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                      ------>NtERF2                     <---------ARR14(2)                     xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                     --------->ARR14(2)                    <---------At4g35610                    --------->ATERF1(1)                   <---------RAP2.3(1)                   <---------ATERF1(1)                  <---------RAP2.6(2)                  <---------DEAR3(1)                  <---------RAP2.3(2)                --------->ALFIN1   --------->TOE1(2)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            ---------->DOF2       --------->CCA1(2)   --------->AHL20(2)            ---------->ID1            <---------ZAT14--------->SPL7        <---------ANAC58             <---------YAB1         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <---------ANAC58          --------->AHL20(1)     <--        <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   --------->CCA1(2)  <-----------RAV1(1)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        <---------ANAC46          <---------AHL20(1)    <---    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      ------->GAMYB<---------YAB1 --------->AHL20(2)--------    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    <---------At4g35610           <---------AHL20(2)<------- >TEIL <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --------->At4g35610          --------->AHL20(2)---------   aatagagaatttactaaagtgcggctccgaacgaagacatgcgattcaactgcgtataaaatatgatatgactcaattttatttttgttgtctatttatt  19482400         --------->AtLEC2    <----------DOF2 -------At5g28300 --------GT1          --------->ARR11(3) ->AHL20(2)           <---------ARR11(3)     --------->TOE2(3) --AHL20(2)       <---------AHL20(2)       <---------AHL20(2)                                     <-- >AHL20(2)       --------->AHL20(2)  <----------DOF2                  --------->AHL20(2)<-----------GT1   taccgtcttttatgcaaaatttaaaatctaaaatccaaactttattaacttaaaaaccactataaatcccaaatatttatgggtcaaaatttactgaaac  19482500                                                           --------->AHL20(1)                                                           <---------AHL20(1)                                                           --------->AHL20(2)                                                           <---------AHL20(2)                                                          <---------AHL20(2)                                                       <---------ICU4                                                       <--------ATHB1                                                       --------->AHL20(2)                                                       --------->YAB1                                  <<<<<<<GRF7          <---------AHL20(2)                                ----------->HVH21      <---------AHL20(1)       <------NtERF2          ----------->RAV1(2)     <---------YAB1           <---------AHL20(2)      --------->LBD16         =============================RAV  <---------AHL20(2)     <---------ANAC46        -------->P               --------->ICU4          <---------AHL20(2)<----     <---------ANAC58     <---------MYB52(2)        --------->YAB1     ----------->GT1          -----     <---------ANAC58    --------->At4g35610     --------->YAB1 --------->AHL20(2)            -------    <---------LBD16      <---------At4g35610   ----------->RAV1(1)   ---------->DOF2    --------->ICU4 -------ZAT14     --------->TOE1(2)      <-----------GT1  --------->AHL20(2)  --------->AHL20(2)-----   taaactggcgggactaaaatccttggaagctaacctgacatttttactccaacataataattttatttaaaaaaagaaaattaaatagtgaagatgaata  19482600                                                                                                   --                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                            <--------                                                                                           --------->At4g35610                   ---------->DOF2                <---------YAB1                           <---------At4g35610         --------->ANAC46                       <---------AtLEC2                      <---------TOE2(3)         --------->ANAC58     <------ZmHOX2a(1)<-------TEIL                           <---------TOE1(3)  <---------At4g35610  ---------->DOF2 --------->ANAC46                          --------->At4g35610 -----AHL20(1)  --------->ANAC46     <---------MYB52(2)                  --------------->AGL15<------ ---->ARR11(3)  --------->ANAC58     --------->MYB46(3)  --------->YAB1  <----------DOF2  --------->MYB52(1) >TEIL   --------->ANAC58 --------->TOE1(2)   --------->AtLEC2           <---------------AGL15<------ ---->AHL20(1)  --------->ANAC58  <----------ID1--------->YAB1     <---------ZAT6<---------At4g35610   ttttggctgataagccataagcaaagaaagtaggaaggaacaaacaacatgcatgatagtcatcatctagtgttcctttttttagcttaaggtagcggat  19482700  Previous    Next  AGI:  At5g48020.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO15084.1); contains domain PTHR10209 (PTHR10209); contains domain SSF51197 (SSF51197); contains domain G3DSA:2.60.120.330 (G3DSA:2.60.120.330) Range:  from: 19479884    to: 19482183    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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