Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ARR14(2)             --------->ARR14(2)                        ----------->ARR10        <---------YAB1                              ------------>MYB.PH3(2)      <-------TEIL       --------->TOE2(3)                          --------->DAG2        <---------WOX13(1)      --------->YAB1                             ---------->DOF2      <---------ICU4         <-------     <---------YAB1        --------->AHL20(2)<---------HSFB2a(2)     <---------YAB1          -------- ---->AHL20(2)     <------ZmHOX2a(2) <---------WOX13(1)--------->MYB59--------->ATHB12    --------->YAB1 -----AHL20(2)<-----------GT1  --------->YAB1--------->HSFB2a(2)   <---------AtLEC2  ----------->GT1   atatagtatcatcaatatacgatccaaaatgaattatagattgacttatggaaaagttagatactatatgcatgattgccaaatacattgaaaaataaca  19414300                                                                                        <---------ANAC46                                                                                      <------MYB46(1)                                                                                      ----------->GT1                                                                                      <------MYB83                                                                                     <---------AtMYB61                                                                                     --------->MYB111(1)                                                                                     <---------DEAR3(1)                                                                                     --------->MYB111(2)                                                                                     --------->MYB46(2)                                                                                     <---------MYB46(3)                                                                                     --------->MYB55(2)                                                       <---------MYB46(3)           <---------MYB55(1)                                                     <-------GAMYB                  <--------P    --------->ARR11(3)                           <---------LBD16                   <-------GAMYB    <---------ARR11(3)                          <---------LBD16                --------->ANAC46 ----GT1               <---------YAB1      <---------MYB59     <----------DOF2<---------LBD16 ->YAB1        ---------->DOF2      <---------MYB46(3)<--------P             <---------ALFIN1   atttaagttcttcaaacaaaagtttataaatgactcggtgtttgacataactcggggttgtttttctttgttaattcacacacggggttggtgtataaat  19414400                                      --------->DAG2                                 --------->AHL20(2)                                --------->AHL20(2)                                <---------------AGL15                         --------->At5g28300                                                   ------                       --------->ANAC46                                                --------->AHL20(2)                       --------->ANAC58                            <----------ID1----------->GT1                       --------->ANAC58      <------ZmHOX2a(1)   ------------------------>ANAC81                       --------->ANAC55(1) --------->ANAC58      >>>>>>>>>TBF1---------->DOF2 -------                  ----------->HVH21 ---------->DOF2   ------------------------>ANAC81  <---------AHL20(2)      <---------MYB46(3)----------->GT1    --------->ANAC58 ------------------------>ANAC81  --------   gacttcggtgtttgaaatgtatgacacggtataaataaaaaaggtaaggaagaaatgaagaatagaagaagaacaaaaaaaaaaggaaattaaaaaaaag  19414500                                                                    <---------------AGL15                                                                    --------------->AGL15          --                    --------->ARR11(3)                             ----------------->AGL2          --    <---------AHL20(2)                                             ----------------->AGL3          --   --------->AHL20(2)        ----------->HVH21 --------->TOE2(3) ------>MYB83                    <---   <---------AHL20(2)    <-----------GT1  <-------TEIL           ------>MYB46(1)                 <--- ----->GT1         <------ZmHOX2a(1)  --------->ATERF1(1)      --------->AtMYB61                 <--- -->DAG2         <---------TOE2(3)   <---------At4g35610    <---------ALFIN1             ------------ -->DOF2       ---------->DOF2       --------->At4g35610 --------->ZAT6                 ----------->GT1   tcaaaataaatggtcagtaaaggattttgaccagaccggagcggtccatccatagtttcccactaccttccctgatttagcacagaagaatggcaatttg  19414600                                       <---------AHL20(2)                                      <---------ARR11(3)      --------->AHL20(2)              --------->ARR11(3)      <---------AHL20(2)              --------->AHL20(1) ------->ANAC58                       <---------AHL20(1)                                        ----- ------->ANAC46                       --------->AHL20(2)                                       <----- ------->ANAC58                      --------->AHL20(2)                                        ------ ------AtLEC2                    ----------->TBP                      --------->ANAC46      --------- ------ANAC58                    --------->AHL20(2)               --------->AtLEC2   <----------DOF2 ------ANAC58        ------>ZmHOX2a(1)<---------AHL20(2)  <---------ARR11(3)        <---------DAG2 >CBF--------->AHL20(2) ------>ZmHOX2a(1)            ------------>CBF*TSS        <---------ALFIN1<---   catgccatttatttcatctattcctccttcactctataaatatattttaaacaaaatcaatttcttccatacacaaaaatcaaacaccttttgagagcgg  19414700                                                                                       ==============                                                                                       <----------DOF2                                                                                      ------>ZmHOX2a(2)                                                        <-----------RAV1(1)          <---------RVE1(1)                                                     ------>ZmHOX2a(2)               <------ZmHOX2a(2)                                                    <---------GLK1(1)               --------->AGP1                                        <---------AHL20(2)       <---------ANAC58   <---------ARR11(3)                                <---------ANAC46    <<<<<<<<<GATA-3                 --------->ARR11(3)    <-----------GT1             <---------ANAC55(1) <<<<<<<<<GATA-2       --------->GLK1(2)  <---------AHL20(2)            <---------ANAC58    <<<<<<<<<GATA-1       --------->ARR14(2) ---->At5g28300                 <---------ANAC58    <<<<<<<<<GATA-4       <---------ARR14(2) ----MYB46(3)                 --------->MYB52(1)    <------ZmHOX2a(2)     <---------ARR11(1)      <-- ----->GT1                   <---------SPL7        <---------ARR11(3)  <---------------AGL15      --- --->MYB.PH3(1)             --------->TOE1(3)      --------->ARR11(3) ----------------->AGL1      --- ------MYB52(1)             <---------DAG2         <---------AGP1<---------ANAC58 ----------->ARR10   ttattttttctctatcaactaatacagtaaccttacgggtgtttatttgtatagatctctgtggttttcttggccaaatctagtgagatctttttggttt  19414800                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                             ------->TEIL                       ------>MYB83                   <---------TGA1a  --------->MYB46(3)                        --------->MYB46(3)                   <---------O2   --------->MYB52(1)                >>>>>>>>>AtCCA1   --------->ARR14(2)         --------->YAB1         <---------MYB52(2)                  >>>>>>>>>AtLHY    <---------ARR14(2)  <---------ARR14(2)           --------->ANAC55(2)               <---------MYB59-------->P    xxxxxxx  --------->ARR14(2)           --------->ANAC58                 <---------At4g35610  <-----------HVH21 ============================bZIP_DOF------->GAMYB            <------ZmHOX2a(1) ------>MYB46(1) -------HSFB2a(2)  --------->O2--------->ANAC58           <---------TOE1(1)   --------->AtMYB61 ------>HSFB2a(2)  ==========================MYC_MYB   --------->TOE1(2)  --------->SPL7<---------LBD16 ------>HSFC1(1)<----------ID1 --------->ANAC46--------->TOE1(2)--------->At4g35610 ----------->HVH21   ctcgaattcgatgaaaatgagacgaggcaattcaagtaacgaccatgaacttgggattctacgaggagctaactcggacaccaactcggacacggagagc  19414900                                                                                 ------>ZmHOX2a(2)                                                                                <------ZmHOX2a(2)                                                                               --------->ARR14(2)                                                 <---------ANAC58              <---------ARR11(3)                                                 <---------ANAC58              <---------ARR14(2)                                               --------->ALFIN1                <-----------ARR10                                     ------>NtERF2<---------PCF2            <------NtERF2                                     <---------RAP2.6(3)                   ------>NtERF2                                    <---------RAP2.6(2)               <-------TEIL                                    --------->ATERF1(2)              --------->ARR14(1)                                    <---------ATERF1(2)              --------->CCA1(2)                                    --------->RAP2.6(2)             --------->ARR14(2)                                   --------->ATERF1(1) --------->ANAC58   --------->DEAR3(1)                               <----------DOF2<-------MYC3          <---------GLK1(2)                          --------->PCF5      ------->MYC3          --------->ARR11(1)                  <----------DOF2<---------WRKY18(1)   --------->ANAC58   --------->At1g77200--------                ----------------->AGL1<------NtERF2    --------->ANAC46  --------->DEAR3(2)  --------               ------>NtERF2  <---------MYB52(1)<-------TEIL  --------->ANAC58 --------->ARR14(3)           --------->ALFIN1<---------ZAT18    --------->TOE2(2)     <---------ARR14(2)---------------     --------->MYB46(3)  <---------SPL7       <-------MYC2    --------->ANAC58 --------->ARR11(3)     ----------->HVH21<---------At4g35610     ------->MYC2    --------->ANAC46 <---------ARR14(3) xxxxxxxxxxxxxx>smallRNA(i2) <------NtERF2    --------->TOE1(2)   ----------->ARR10  ----------------   atcgctagcgaccgtggtgcctttagcggtccgcttggccggcctaaacgtgcgtccaagaaaaacgcaagattcgccgacgatcttcccaagagaagca  19415000              <---------ANAC58              <---------ANAC58              <---------ANAC46             <---------DEAR3(1)            <------NtERF2            --------->ATERF1(1)            ------>NtERF2           <---------RAP2.3(1)           <---------ERF1           ------>NtERF2          <---------ATERF1(2)          <---------DEAR3(1)          <---------ANAC58          <---------RAP2.3(2)          <---------RAP2.6(2)          <---------RAP2.3(3)          <---------ANAC58          <---------DREB2C(2)          --------->ATERF1(2)         <------NtERF2        <---------ATERF1(1)                  --------->ANAC58        ------>NtERF2                        --------->ANAC58                                       <       --------->ATERF1(2)                   --------->ANAC46                                  ------      <---------ANAC58                    <------ZmHOX2a(2)                                    ------      <---------ANAC58                   <---------ARR11(3)               <---------RAP2.6(3)  ------      <---------ANAC46                   --------->ARR11(3)              --------->RAP2.6(2)   <----- <-----------RAV1(1)  ----------->TGA1  <---------GLK1(1)                --------->DEAR3(1)    <----- <---------ZAT6 --------->ALFIN1    --------->ALFIN1                    --------->ATERF1(1)--------->ANAC58 ->ANAC58--------->ATERF1(1)      <---------ANAC46                     <------NtERF2       --------->ANAC46 ->ANAC58--------->RAP2.6(3)      <---------ANAC58                    ------>NtERF2        --------->ANAC58 >AGL15<---------ATERF1(2)        <---------ANAC58                   --------->ALFIN1    --------->MYB46(3) ->AG<---------At4g35610<---------------------WRI1                <---------DEAR3(1)     ---------->DOF2   atagtgttgctggcggccgtggtgatgacgatgagtacgtggagatcacgctagacatcagggacgactcggtggccgtccatagtgtccaacaagcagc  19415100                       --------->ANAC46            --------->O2            <---------O2   <---------At4g35610            <---------ZAT2 --------->ZAT2            --------->ZAT2 --------->At4g35610        --------->ATERF1(1)<---------ZAT2     --------->ATERF1(1)  <-----------ARR10   --------->ALFIN1   <---------LBD16                                      <---------ALFIN1 ---------AtMYB61   --------->TCP16(1)                                     --------->AtMYB61 ----->RAV1(2)      --------->ARR14(2)                                  --------->ANAC46 --->ZAT2   ----------->RAV1(2)                                      --------->MYB46(3) --->At4g35610      <---------ARR14(2)                          --------->TOE2(3)  <---------CCA1(2)- ----At4g35610     <------ZmHOX2a(1)                       <---------At4g35610    ------>ZmHOX2a(1)<- ----ZAT2  ------>NtERF2--------->LBD16                    --------->At4g35610<---------ALFIN1 ------   tggaggtggaggccacctggaggacccggagctagcccttcttacgaagaagactctcgagagcagcctcaacaacaccacctccttatctttcttccga  19415200  Previous    Next  AGI:  At5g47910.1    Description:  RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D). Identical to Respiratory burst oxidase homolog protein D (RBOHD) [Arabidopsis Thaliana] (GB:Q9FIJ0;GB:O81212); similar to ATRBOHA (RESPIRATORY BURST OXIDASE HOMOLOG A), FAD binding / calcium ion binding / iron ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G07390.1); similar to RHD2 (ROOT HAIR DEFECTIVE 2) [Arabidopsis thaliana] (TAIR:AT5G51060.1); similar to ATRBOHB (RESPIRATORY BURST OXIDASE HOMOLOG B), FAD binding / calcium ion binding / iron ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G09090.2); similar to NADPH oxidase [Nicotiana tabacum] (GB:AAM28891.1); simila Range:  from: 19414669    to: 19419287    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version