Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ----------->ARR10                    --------->YAB1                   <---------AHL20(2)                  --------->AHL20(2)               --------->AHL20(2)            <---------ICU4                                                                      -----            -------->HAHB4                          --------->YAB1                              <----       --------->AHL20(2)                          <---------YAB1             <---------TOE2(3)------ ----->GLK1(1)<---------YAB1                      --------->AHL20(1)          --------->MYB59  <----- -ZmHOX2a(1)--------->YAB1 --------->CCA1(2)      --------->AHL20(2)      <----------DOF2      <----- ->ANAC58  <---------YAB1 --------->ARR11(3)      <---------AHL20(2)   <---------YAB1<-----------GT1 ->ANAC58  --------->ICU4 <---------ARR11(3)     --------->YAB1        --------------->AGL15   <-----   attcaaaaaaaaaatgattatataataagatatgtctccaattctacaaaattataatacaaatttcaaatttctgattttaggtatatacaatctaatt  19409100                                                                                                 <---                                                                                               ------                                                                                              <------                                                                                         ---------->DOF2                                                             --------->TOE2(3)       --------->AHL20(2)  ------>ZmHOX2a(1)     --------->YAB1                      --------->ATHB12         --------->YAB1 --->HAHB4             <<<<<<<<<ARR1                        -------->ATHB1          <---------ATHB12 -----ICU4        <-----------GT1                           --------->YAB1    --------->ARR14(2)<---- --->ICU4<---------YAB1<<<<<<<<<ARR2                        <---------ICU4    <---------ARR14(2)----- ----ATHB51    <----------DOF2                              <--------HAHB4    --------->GLK1(2)<----- ----ATHB12<---------GLK1(2)                               <---------ATHB12<---------ANAC58   ------- ----YAB1<---------ATHB12 <-----------GT1                  --------->ICU4  <---------ANAC58  <------ZmHOX2a(1)   attcctcttccatgattcttttacaatcttaccttctcttccgattttagttcgaaatggaatcattagtttctctggcgaatccaataaaaaaaggata  19409200     <---------KAN4(2)   <---------MYB52(1) ------YAB1                                              <-----------GT1 --->GLK1(1)                                         <---------ARR11(3)          <---------TOE2(3) ---ARR11(3)                                    <---------ANAC46     <----------DOF2 -----ARR11(3)                                ------->TEIL  <----------DOF2   <---------AHL20(2) ---->ARR11(3)                             --------->ANAC55(2)    <-----------GT1<---------TOE1(3) ----GLK1(1)                               <---------ANAC55(2)   ---------->ID1 <-----------GT1 -->ARR11(3)                    <---------GLK1(2)    --------->ARR11(3)      --------->YAB1   tcatcggtatgttctcttcttcttggcaaaaacacattctccaatatgtatcggagattttacttttgtttcttttcaattttaacgaaatatgcattag  19409300                                          --------->TOE2(3)                                          --------->TOE1(3)                                          <---------DAG2                                       <-----------GT1                                <---------AHL20(2)       --------->ALFIN1                               <---------YAB1          <---------ANAC58              --------->DAG2                            <---------RVE1(1)          <---------ANAC46             ---------->DOF2                           <---------GLK1(2)           <---------ANAC58      --------->ANAC58                           --------->ARR11(3)      --------->ZAT14--------------->AGL15                           <---------ARR11(3)  --------->ZAT6 <----------DOF2--------->ANAC58       -                  ----------->GT1 <---------YAB1   <---------ZAT14<---------------AGL15       -------   tcttcgtagaagtagcataccagtaaaaagatttttatttttaaccttatcacttcagcgtgggctttctcttatttgcaggcccataaagcgagagagt  19409400                                                              ------->PIF4                                                              <-------MYC3                                                              ------->PIF5                                                              --------->TOE1(2)                                                              <-------PIF4                                                              ------->MYC2                                                              <-------MYC4                                                              ------->MYC3                                                              <-------MYC2                                                              <-------PIF5                                                             <---------PIF3(3)                                                             --------->PIF3(3)                                                             --------->TGA1a                                                             <---------O2                                                             <---------TGA1a                                                             --------->O2<---------TOE1(2)                                                    <---------ZAT14      --------->LBD16                                                    --------->ZAT14      <---------TOE2(2)                                                  --------->ANAC46  --------->GLK1(2)                  <---------ANAC58              --------->YAB1------->MYC4           ----------->GT1                  <---------ANAC58             <---------ATHB12     --------->ARR14(2)              --------->At4g35610            --------->WOX13(1)     <---------ARR14(2)--------->At5g28300        ---------->DOF2                --------->DAG2<---------ALFIN1   <-----------RAV1(2) <-------- --------->DOF2  ------>NtERF2         --------->MYB59     <------------OsbHLH66    --------->ZAT6 ---->GT1--------->DAG2  --------->GLK1(2) ------------>CBF<---------ALFIN1   <------------CBF-------   aaaaaagagataaagtcgctgcgagcgaatcaagttcggataaggtccaatcacaacacagccacgtgcgaatcccaggttattgaacagtaaaacaaac  19409500                        --------------->AGL15                       <-----------------AGL1                 ------>MYB46(1)                 ------>MYB83         <---------ZAT18<---------------AGL15     --------->ALFIN1  <-----------------AGL2                                              --------->YAB1   =======================MYC_MYB                                                          --------->AHL20(2)   <---------O2  -------->P   <---------TOE2(3)                                            <---------AHL20(2)   --------->TGA1a--------->MYB46(3) <---------ATHB12                                   <---------ICU4   ============================MYC_MYB                                                 ------>ZmHOX2a(1)   =====================================bZIP_DOF                                      <---------MYB59   <---------TGA1a<------------AtMYB77    <---------ARR11(3)     --------->YAB1    <-----------GT1   --------->O2*TSS    <-----------------AG                     <---------YAB1--------->ARR11(3) -MYB52(2)  --------->ANAC58  <---------TOE1(3)              <----------DOF2  <---------ARR11(3) -->MYB52(1)--------->ANAC58 ---------->DOF2       <----------DOF2            <---------AHL20(1)   ggctcaagtggctcactccaaccgttctcgttaaggcaaatcaagttctgtttctttttctgacttttgataattttggatatattttcctaattatata  19409600                                                                                    --------->YAB1                                                                                   <---------YAB1                                                                                  --------->ARR11(3)                                                                                  <---------ARR11(3)                                                                                 -------->HAHB4                                                                                 --------->YAB1                                                                                 <---------ICU4                                                           --------->WOX13(1)   --------->ICU4         --------->ZAT18                                --------->ANAC58   --------->YAB1        <---------ATERF1(1)                         <---------------------WRI1  <---------YAB1       <---------DEAR3(1)                         <---------SPL7          <---------YAB1      ----------->RAV1(2)                       <---------------AtSPL8  --------->YAB1      --------->ATERF1(1)                    <---------TOE2(3)         <---------ATHB12     <---------ATERF1(1)                    --------->MYB52(1) ---------->DOF2<---------ICU4     ------>NtERF2                        <---------MYB52(2) <---------ATHB12 --------->YAB1 <-------   --------->ATERF1(1)               --------->ANAC58   --------->ANAC58<---------ICU4       <-------  <---------ATERF1(1)                --------->ANAC58--------->ANAC46  --------->ICU4 <---------YAB1 --------->ANAC46   ------->TEIL    <---------------------WRI1--------->YAB1 --------->ICU4  <-------   tagacgacgcctgcgctagatgaatttgttgtgatgcgaacgaaactaacgatgtacgaagcaatcaaagacaatgatgataatgatcatcaatggcgag  19409700                                                               --------->ATHB12                                                         --------->ANAC58                                                         --------->ANAC46                                                         --------->ANAC58                                                     ------>NtERF2                                                    --------->ANAC46      --------->ARR11(3)                            ----------->HVH21  ---------->DOF2                                   --------->LBD16                            <----- --ANAC58                  <---------GLK1(1)        <---------ETT(1)                         <------- --ANAC46                  --------->GLK1(1)     ------>ZmHOX2a(1)                     <---------LBD16 --ANAC58        <---------At4g35610     ------>ZmHOX2a(1)<---------MYB52(2)       <----------DOF2<--   agaagaaagacattgagtctgctcttcagatttctcgttcttcctctcttcctcccgacaaggaacgattagtttcccttgatgtctttcgcggtcttac  19409800                                  <---------ANAC58                                  --------->ANAC55(2)                                  <---------ANAC55(1)                                     <---------ANAC58                                  <---------ANAC55(2)                                 --------->YAB1    --------->At5g28300  <----------DOF2                                    ------->GAMYB <---------ANAC58 ----At5g28300        <-----------GT1                                      --------->MYB46(3) --SPL7              <---------ATHB12         ----------->GT1       <---------ANAC46 <---------YAB1 ---------HVH21---------->ID1     <---------ANAC58         <---------YAB1<-----------GT1<---------YAB1   cgtcgcagtaagtttttgttctaatcactttctaatacgtgatcaacaatgtaattagagtataattgttgtgtttaaccacagtttatgatacttgtgg  19409900                             <---------ICU4            --------->MYB52(1)                            <---------ATHB12   <-----------HVH21                            <------MYB46(1)                            <---------YAB1    --------->bZIP60(1)                          <---------AtMYB61                          <-----------GT1     <---------bZIP60(1)        <----------DOF2<-----------RAV1(1)                          --------->WOX13(1)<------MYB46(1) <---------GLK1(2)<-----------GT1<------MYB83                <---------At5g28300         <------MYB83    --------->ARR14(2)         <---------YAB1               <-----------GT1--------->WOX13(1)   --------->ZAT6<-----------HVH21   <---------AHL20(2) <-----------RAV1(1)      --------->YAB1   <---------AtMYB61<---------ARR14(2)      <---------AHL20(2)   atgatgttggagggattttaccatctattaatcattcaccttgggatggtgtcacactagcggattttgtcatgccttttttcttatttattgttggtgt  19410000  Previous    Next  AGI:  At5g47900.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G27730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68737.1) Range:  from: 19409515    to: 19412361    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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