Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->TOE1(3)                                          --------->YAB1           --------->YAB1                            <---------AHL20(2)                        <-----           --------->TOE2(3)                -------->HAHB4           --------->AHL20(2)       -------        --------->YAB1                      --------->YAB1   ---------->DOF2        <---------ICU4       <---------ATHB12             --------->ICU4  <---------ATHB12 <---------AHL20(2)       <------   --------->AHL20(2)     <-------TEIL     <---------YAB1--------->TOE1(3)         <---------AHL20(1) ------->AHL20(2)      <---------ANAC58  --------->YAB1  --------->TOE2(3)         --------->AHL20(1) --------AHL20(2)      <---------ANAC58  <---------ICU4--------->ARR11(3)-------->HAHB4  --------->ANAC55(2) ------>AHL20(2)      <-------TEIL  <---------YAB1--------->YAB1    --------->AHL20(2)   <---------ANAC55(2) -------AHL20(2)    --------->TOE2(2)   --------->ICU4 <---------ARR11(3)--------->YAB1<-----------GT1   ttaaattcaataatcttaataacatgcgttcatcagtaatgaataatgatactaataaatcttaaaagaaattaataatacaaaaaatattacatattaa  19405400                                    ------>ZmHOX2a(2)                                 --------->YAB1                                   <---------At4g35610                                --------->TOE2(3)                                  <---------AGP1                               <-----------GT1      <------ZmHOX2a(2)     ----------->HVH21                            --------->ANAC46     --------->ARR11(3)   <---------At4g35610                            --------->ANAC58     <---------ARR11(3)   --------->At4g35610                            <---------ANAC55(2) ---------->DOF2<--------ATHB1    ------->TEIL                           --------->ANAC55(2)        < ----AHL20(2)   --------->YAB1    <---------ARR14(2)                     --------->ANAC58          <- -->AHL20(2)   <---------ATHB51   --------->ARR14(2) ------>MYB83       <---------LBD16            -- ---AHL20(2)   <---------YAB1  <---------WOX13(1)    ------>MYB46(1)   <-----------GT1--------->TOE1(3)   tttcaaagatcaagacaataatagatttagctgatggatctgtcttacaaaaaccaatctcttcaattctatattacggaataactaatcttaattcaga  19405500                --------->ANAC58                --------->ANAC46                --------->ANAC58             ------->GAMYB            <---------ALFIN1                                                          --------->LBD16    <---------AHL20(2)                                                                --------->ANAC46    --------->AHL20(2)          --------->YAB1                                       --------->HSFB2a(2)   --------->AHL20(2)          <---------YAB1                                        <---------HSFB2a(2) ---------YAB1  --------->ANAC55(1)                                                 <---------LBD16-- --------AHL20(2)        <---------WOX13(1)    ---------->DOF2            --------->GLK1(2) --------- ------->AHL20(2)      --------->ATHB12   <----------ID1                 <---------GLK1(2)  ---------   ttaaaattaattcaacacacgaaatcgattgctatgatatcaaaacgagaaaagccgataaacaagtatacttaagaatctaaaattcccgaaacctaaa  19405600            --------->AtLEC2            --------->ANAC58            --------->ANAC58           ------->MYC2           <-------MYC2                     <------ZmHOX2a(2)        ------->GAMYB                   <---------ATHB12                             <------ZmHOX2a(1)  --------->TOE2(3)                   --------->WOX13(1)                            <----------ID1  --------->YAB1                   --------->GLK1(2)                              <---------ICU4 ------->MYB52(1)           <------ZmHOX2a(2)                 <---------ATHB12 --------->YAB1 >TOE2(3)  <-------MYC3   --------->At4g35610          --------->YAB1    --------->ANAC55(2) >TOE1(3)  ------->MYC3   <---------At4g35610        <---------KAN4(2)   <---------ANAC55(2)---------   acaacgataaccacatgcaaaacaaatcagatcacagaatcaatcgatcaaatcgaataatcaaatcaaacaattacgaattcataaggacaaattaaaa  19405700                          ----------------->AGL1                                <---------------AGL15                          ----------->RAV1(2)                              <----------DOF2                         --------->MYB52(1)                          --------->AHL20(1)                         ------->TEIL                                <---------AHL20(1)                     --------->DAG2                       --------->HSFB2a(2)<-----------GT1                <------ZmHOX2a(2)                  --------->ANAC58  <---------AHL20(2)               <---------ARR11(3)                  --------->ANAC58 --------->AHL20(2)     ---------->DOF2---------->DOF2             --------->WRKY18(1) --------->YAB1       ------------ >AHL20(2)     --------->ARR11(3)>>>>>>>>>TBF1------->GAMYB        <---------YAB1       *TSS   <-----   cccaaaaaaaagatgaagatcaaaaagtacctgaagaagaaggaacaacgctcaagccttcgacaacttattatattctttactgtatgaagacaatttg  19405800                                                                   ------>MYB46(1)                                                                   ------>MYB83               ----------->TBP                                  --------->DEAR3(2)              --------->ARR11(3)                              --------->MYB52(1)              <---------ARR11(3)                          >>>>>>>>>MYB98            --------->GLK1(2)                            ------>MYB46(1)  <------NtERF2--------->AHL20(2)                        ------>MYB83     <---------AHL20(2) >CBF---------->DOF2<-----------GT1                      --------->MYB52(1) ------RAV1(1)<---------AHL20(1)                       <---------MYB59   --------->AHL20(2)     <----   tggcagagaaagagaatatatataacctagtttttttttttttttttttggtctaaacctaacaaaaccgactcatttaatgggcctaagcccagtaact  19405900                                                                                                  ---                                                                                           <---------ANAC58                                                                                           <---------ANAC46                                                                                           --------->ALFIN1                                   --------->ANAC55(2)                                     <---------ANAC58                       ------------>CBF  <---------AHL20(2)    <---------ARR11(3)       <---------MYB52(1)                  <------NtERF2<----------DOF2                 *TSS                    <-------GAMYB       --------->ANAC55(2) <---------ATHB12                    --------->ARR11(3)  <----------DOF2<-- ------DOF2   <----------ID1<---------ARR11(3)             ---------->DOF2 <----------DOF2 <---------   ttccgactcacttaatgggccgaagaccaataactttacttaattcattttcacatgaacacaaagttctctctggtctttgattctttcgttgtgtggc  19406000                                                                         <---------GLK1(2)                                <---------ANAC46                        <------ZmHOX2a(1)     ----------->GT1            <---------AtLEC2                      <---------TOE2(3)     <---------ZAT6             <---------ANAC58                 <---------ARR11(3)              <--- ------>At4g35610    >>>>>>>>>TBF1       <------ZmHOX2a(1)   ---------->DOF2    <----------DOF2  ---- -------At4g35610 >>>>>>>>>TBF1 <---------ANAC58           <---------YAB1--------->ARR14(2)      <--- --RAV1(1)    <------ZmHOX2a(1)<-----------------------TaNAC69(2)--------->ARR11(3)   --------->WOX13(1)   atctgaagagttaagaggaagaagaagaacgatggcatggagaggaagcatatcgaagtctatgaaagagcttaggattcttctttgtcaatcttctcca  19406100        <---------ALFIN1       --------->MYB46(3)     --------->PCF2   <---------ZAT18                                                   <---------ARR14(2)   --------->ZAT18                           ------>ZmHOX2a(2)       --------->ARR14(2)   --------->ZAT14            --------->ANAC58                      <---------GLK1(1) ------ZAT2                   --------->ANAC58          <-----------GT1                             < ----->ZAT2<-----------RAV1(2)--------->ANAC46      <---------AHL20(2)    <---------MYB52(1)        < ------At4g35610            ---------->DOF2 <------ZmHOX2a(2)       <---------CCA1(2)               <   gctagtgctcccaccaggtttcaatttgatcaaagcaatctctgagatcggaattttttttcaatgttccatatccgttttgtgatttatagggtttttg  19406200                                                                                       <---------ZAT18                                                                           <---------ANAC55(1)                                                                           <---------ANAC58                  <-------GAMYB                                            <---------ANAC58             <---------HSFB2a(1)                                           <---------ANAC55(2)        <---------HSFB2a(2)                                         --------->YAB1     --------->ZAT14        --------->HSFB2a(2)                                        <---------ATHB12    <---------ZAT14  <---------MYB52(1)       <---------ICU4             --------->TOE1(3)    <---------ANAC46 <-------GAMYB <---------MYB52(1)                     --------->TOE2(3)   ------>ZmHOX2a(2) ---------ANAC58 --------->MYB52(2)   --------->CCA1(2)           ------>MYB46(1)   <---------ANAC46 ---------ANAC46 --------->MYB55(2)  --------->ARR11(1)           ------>MYB83    <---------ZAT14 ---------ANAC58 <---------MYB46(3)  <---------ARR11(3)      <-----------GT1--------->LBD16        <-   tttcgttgtttcagaacgtttgttgagaagaattacaaagatttgaagtctctaaaccctaaattaccaatcttgatccgtgaatgtagtggagtccagc  19406300  Previous    Next  AGI:  At5g47880.1    Description:  ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1); translation release factor. Identical to Eukaryotic peptide chain release factor subunit 1-1 (ERF1-1) [Arabidopsis Thaliana] (GB:Q39097;GB:Q9FIJ3); similar to ERF1-3 (EUKARYOTIC RELEASE FACTOR 1-3), translation release factor [Arabidopsis thaliana] (TAIR:AT3G26618.1); similar to ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2), translation release factor [Arabidopsis thaliana] (TAIR:AT1G12920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64712.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77215.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63440.1); contains InterPro Range:  from: 19403326    to: 19405788    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g47890.1    Description:  NADH-ubiquinone oxidoreductase B8 subunit, putative. similar to unknown [Populus trichocarpa] (GB:ABK92741.1); contains InterPro domain Mitochondrial ribosome (InterPro:IPR007741); contains InterPro domain NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2 (InterPro:IPR016464) Range:  from: 19405963    to: 19407855    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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