Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->ARR14(2)                                                --------->GLK1(2)                                                <---------ARR11(3)                                                --------->ARR11(3)                                          -------->P                                          ------>MYB46(1)                                 <---------ICU4                                          ------>MYB83                                    <---------AHL20(2)                --------->AHL20(2)       ----------->RAV1(1)                              --------->AHL20(2)      --------------->AtSPL8    <------ZmHOX2a(2)<---------HSFC1(2)                  <---------ARR11(3)    <---------ANAC58           --------->AGP1   <-----------ARR10                    --------->ARR11(3)    <---------ANAC58           --------->ARR11(3)--------->HSFB2a(1)     --------->YAB1  --------->ICU4    <---------AtLEC2          --------->At4g35610--------->HSFC1(2) <---------ARR11(3)   <---------YAB1   <<<<<<<<<<FUS3             <---------At4g35610<---------HSFB2a(1)--------->ARR11(3)<---------YAB1   <<<<<<<<<<ABI3         --------->TOE2(3)     <---------ARR14(2)----------->GT1  ----------->GT1 --------ARR14(2)         --------->TOE1(3)    <---------GLK1(2)---------->DOF2  ---------->DOF2 ------->ARR14(2)   --------->AHL20(2) --------->MYB46(3) <----------ID1 --------->AHL20(2)         -   cgatttgcatggtacctataaattaaaacctcagatcaagaaccaacaagaatcttcttaacaacaaaaagataataaaaaaaaaaagataattaatacc  19402700                                                                               <-----------HVH21                                                                             <---------TOE2(3)                                                                       <---------------AGL15                                                                       --------------->AGL15                                                                       <---------YAB1                                                                      <-----------------AGL1                                                                  --------->HSFC1(2)                                         <---------YAB1           <---------HSFC1(2)              ---                                      ================================HOX2a_HOX2a                ----                                     <---------ARR11(3)           --------->HSFB2a(1)           <----                                     <---------ARR14(2)           <---------HSFB2a(1)    <---------ARR11(3)                                     --------->ARR11(3)          --------->ARR14(2)      --------->ARR11(3)                    --------->At4g35610<---------ICU4            <---------KAN4(2)     <---------HSFC1(2)                    <---------At4g35610--------->YAB1            --------->GLK1(2)     --------->HSFC1(2)                   ----------->RAV1(1)<------ZmHOX2a(2)         <---------GLK1(2)  --------->ANAC58        ----------------->AGL2   <------ZmHOX2a(1)             <------ZmHOX2a(1)   --------->ANAC58 ---------->GT1  --------->At4g35610<------ZmHOX2a(1)       <---------LBD16  <---------TOE1(3)-------   aagggataaaaccagaagtagcagcagaagtagaaggaggatcatgactcttaacaatgttatcaggaatcttcttattaaggtcacgaagtatctcaat  19402800                                                                                             ------>NtERF2                                                                                             <-------                                                                                            ---------                                                                                           --------->ATERF1(1)                                                                                          <---------ATERF1(1)                                                                                          ------>NtERF2                                                                                         --------->DEAR3(1)                                                                                         --------->ANAC46                                                                                      --------->ARR14(2)                                                                                      <---------ARR14(2)                                                                                     --------->GLK1(1)                                                                                     --------->At4g35610                                                                                  <------NtERF2                                                                                --------->LBD16                                                                                --------->ANAC46                                                                         <-----------GT1<---------LBD16                                                                     <----------DOF2 <---------At4g35610                                                                     <---------DAG2  <---------GLK1(1) ------->DOF2                                                  <---------ARR14(2)--------->LBD16 ----->YAB1                              <------ZmHOX2a(1)     --------->ARR14(2)------>NtERF2 -----ATHB12                           --------->YAB1         <------ZmHOX2a(1) <---------LBD16     < -->WOX13(1)                 --------->GLK1(2)              --------->MYB59    <---------LBD16  -----   caaaggcctagtaatcgacgaagaagacgagaatttgtcaataggaactacataattcgaattaggaactgcttttttcttcccggcatctccgcctccg  19402900                                                                             --------->MYB55(2)                                                                             <---------MYB46(3)                                                                            --------->ALFIN1                                                                           --------->At5g28300        <---------At4g35610                                                <-------GAMYB        ------>NtERF2                                                      <------NtERF2        --------->At4g35610                                               <---------DEAR3(2)       --------->DEAR3(1)                                                 <---------MYB46(3)       --------->RAP2.3(2)                 --------->HSFB2a(2)           <---------AtMYB61       <---------DEAR3(1)       --------->ANAC46                         <---------DREB2C(2)      --------->RAP2.3(1)       ------->GAMYB                            <---------ANAC46     ------>NtERF2              --------->DEAR3(1)                       --------->ALFIN1     --------->ABI4(1)          --------->RAP2.6(2)                      <---------DEAR3(1)    --------->AtMYB61          --------->MYB46(3)                       <------NtERF2    --------->ANAC46           <------------AtMYB77                     <---------ABI4(1)    ------->GAMYB             <---------At5g28300                      <---------RAP2.3(1)    --------->DREB2C(2)      --------->MYB52(1)                       <---------RAP2.3(2)    --------->DEAR3(1)     <---------MYB52(1)                         --------->DEAR3(1)    <---------ALFIN1      --------->At5g28300---------->DOF2          <---------DEAR3(1)   --------->MYB46(3)     <-------GAMYB    <---------YAB1            --------->At4g35610   --------->DEAR3(2)  <---------LBD16     <---------HSFB2a(2)       <---------At4g35610  <---------ATERF1(1)  ------>NtERF2    <---------ARR14(2)        <---------ZAT14 <---------ALFIN1      --------->LBD16  --------->ARR14(2)        --------->ZAT14 --ATERF1(1)  <---------At4g35610  --------->DEAR3(1)            --------->ALFIN1 >DEAR3(1)    --------->At4g35610  <---------ALFIN1            <---------ANAC58        <------ZmHOX2a(1) ---------ZAT14      <---------LBD16------>NtERF2              <---------ANAC58  <------MYB46(1) ->NtERF2    ------->TEIL<---------MYB46(3)----------->HVH21   <---------ANAC46  <------MYB83   actccaccgccgctgcatctaactccgcggttaaccgccacggttctgaaaggggagagtttgatgcgtgcagcggcggtggatggtgaggagattgtga  19403000                         --------->ANAC58                   ------->PIF5               --------->ZAT18               <---------ZAT14               <---------ZAT18               --------->ZAT14            <---------At4g35610                                       <------ZmHOX2a(1)            --------->At4g35610                                  ------------------------>ANAC81  --------->At4g35610    --------->ANAC58                     <---------HSFB2a(2)  <---------ZAT2   <-------PIF5                              <---------LBD16              --------->At5g28300  --------->ZAT2<---------ALFIN1                            --------->ALFIN1             ----------->GT1  <---------At4g35610  ---------->DOF2                     --------->ALFIN1   <------ZmHOX2a(1)*TSS   aggctgctgaagtttgctgcacttgcaaagccattgattttttgtctgagcaaaattgagagttggggaagaggaaaacaggagaagagagtggtaaatt  19403100                                            <------MYB46(1)                                            <------MYB83                                           --------->MYB46(2)                                           --------->MYB111(1)                                           <---------AtMYB61            <----------DOF2                           <------MYB83    --------->MYB55(2)      ------>MYB46(1)                           ----------->GT1 --------->MYB59         ------>MYB83                <---------------AGL15      <---------MYB46(3)      -------->P                --------------->AGL15      --------->MYB111(2)   --------->AtMYB61          <---------ANAC55(2)             <---------MYB55(1)    --------->MYB46(3)            <------          <---------bZIP60(1)           <---------ANAC46      ------>MYB83               <---------AHL20(2)          --------->bZIP60(1)----------->HVH21     --------->At4g35610  <---------DAG2   --------->AHL20(1)          ----------->GT1  <------MYB46(1)<--------P        --------->AtMYB61            <---------AHL20(1)       ----------->TGA1   --------->MYB111(1) --------->ALFIN1------>MYB46(1)            --------->AHL20(2)       ----------->HVH21 <--------P    <---------AtMYB61    <---------MYB59       <----------DOF2   gtgagagacatgacgttacatttagtagtaggtgactaggtgaggtaggtggaagctctaaaccaaaccaaccccttttttggtctttgaatttattaac  19403200                                                                        --------->AtLEC2  --------->AHL20(2)                                                                     <-------TEIL         <---------AHL20(2)                                                                  <---------MYB46(3)     <---------YAB1                                                                 --------->ALFIN1      --------->YAB1                                                               --------->ALFIN1        --------->AHL20(2)                                                             ========================================                                                             <---------O2             <---------YAB1<       <-----------GT1         <---------AHL20(2)            --------->O2          --------->AHL20(2)   <---------YAB1   <---------YAB1     --------->ANAC46      <---------TGA1a       <---------AHL20(2) -----GT1   --------->MYB52(1) <---------YAB1                --------->TGA1a    ----------->GT1<-----   aagtttttattacaaaacgattttgtttgggatattattcaaggcaacttgttttataaacccaagtgtggttcatgccaaatgtttaattataaatttt  19403300                                                                      --------->AHL20(2)                                                                      <---------AHL20(2)                                                                     --------->AHL20(2)        <-----------GT1                                           <------ZmHOX2a(1)        <-------TEIL ==========bZIP_DOF                           --------------------->WRI1    <---------TOE1(3) ----------DOF2                         --------->AHL20(2)      <---------TOE2(3)  ---------->DOF2 ------GT1                          <---------TOE2(3)   --------->HSFB2a(2) <---------TOE2(3)       -   ctcttttttttaactgaagaaattccaatgccgaattttagattaattctttgaacttatagaatttaggatttaattaaggttttaaagacatccatgt  19403400                                                                    <---------TOE2(3)                                                                   ---------->DOF2                                                                 <---------YAB1                                                               <---------ICU4                                                               -------->ATHB1                                                              <---------ATHB51                                                              <---------AHL20(2)                                                              --------->ICU4   ------>MYB46(1)          --------->ARR14(2)                                  --------->AHL20(2)          <---------GLK1(2)                               --------->AHL20(2)   ------>MYB83          <---------ARR14(2)                            ----------->GT1      --------->AtMYB61 -------->YAB1                                        ---------->DOF2        --------->MYB46(3)   aataaaaacccaaattctctcagacaagagtattccaattctgaaataaaactgaccaaagtaaattattaaagaaacaccaactcaaaataaaactcca  19403500                           --------->ANAC58                         ---------->DOF2                  --------->ANAC46                  --------->ANAC58                  --------->ANAC58               --------->MYB46(3)              ------>MYB83 --------->ANAC58        ------->MYC3              <-----------GT1              ------>MYB46(1)                      <-------MYC3       <XXXXXXXXXXXXXXXXXXXXMIR869.2<-           --------->MYB46(3)           --------->ZAT14              ----------->RAV1(2)        <----           <------NtERF2--------->AtMYB61       <---------ALFIN1--------->YAB1 --------->ZAT6   <----   taaatgtctaggcaccaacaacgctaccaaagccaaggcttcttcactctccacatgttccttcattcatcacctgttttaacaccagtatcgagattaa  19403600  Previous    Next  AGI:  At5g47870.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G71310.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G71310.1); similar to unknown [Populus trichocarpa] (GB:ABK95546.1) Range:  from: 19401594    to: 19403095    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g47880.1    Description:  ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1); translation release factor. Identical to Eukaryotic peptide chain release factor subunit 1-1 (ERF1-1) [Arabidopsis Thaliana] (GB:Q39097;GB:Q9FIJ3); similar to ERF1-3 (EUKARYOTIC RELEASE FACTOR 1-3), translation release factor [Arabidopsis thaliana] (TAIR:AT3G26618.1); similar to ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2), translation release factor [Arabidopsis thaliana] (TAIR:AT1G12920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64712.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77215.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63440.1); contains InterPro Range:  from: 19403326    to: 19405788    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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