Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     ------>NtERF2                                                  --------->DEAR3(1)                                                 <------NtERF2                                                 --------->ATERF1(1)                                                 --------->RAP2.3(1)                                                <---------ATERF1(1)                                                <---------DEAR4(2)                 <---------ANAC58       <------NtERF2                                      --------->LBD16                 <---------ANAC58       --------->ZAT2                                    --------->LBD16                 <---------MYB46(3)     <---------ZAT2                                   <---------LBD16                <---------DEAR3(1)     --------->ANAC46                             <----------TaMYB80               ------>NtERF2           --------->ANAC58                             --------->HSFB2a(1)              --------->LBD16          ------>NtERF2<------NtERF2                   --------->GLK1(1)             <---------RAP2.6(2)       --------->ANAC58                             <---------GLK1(1)            <---------LBD16      <-------GAMYB <---------DEAR3(1)                  --------->ARR14(2)          <-----------GT1   <---------SPL7--------->MYB52(1)                       <---------ARR14(2)        --------->ICU4    <---------------AtSPL3<---------RAP2.3(1)              --------->LBD16      >>>>>>>>>GT-2----------->HVH21  --------->ATERF1(2)                   ---------->DOF2------>NtERF2    --------->At5g28300  <---------ARR14(2)  ------->GAMYB           --------->ANAC46--------->KAN4(2)   ----------->GT1 --------->ALFIN1   <---------ATERF1(2)   --------->GLK1(2)  <---------LBD16      <   tggaacggtaattatccggccgtggcagatagtacggttgccagcaacggaggcgccttgagactctttcaactccacaaatgcggaaattcccggcttc  19397900                                                                    ----------->RAV1(1)                          --------->GLK1(2)                   --------->ARR14(2)              <------ZmHOX2a(1)                               <---------ARR14(2)                    -        <---------ZAT2   <---------GLK1(2)                    --------->GLK1(2)                   ---        <---------At4g35610  <----------DOF2          ----------->RAV1(1)       --------->ALFIN1  <--        --------->ZAT2<--------P        <---------ARR11(3)   <---------GLK1(2)--------->ALFIN1    <-- ---------ARR11(3) --------->ALFIN1  ----------->RAV1(1) ------->GAMYB ---------->DOF2--------->ALFIN1   tagctcttcgagctcaggaccgtggtagattcttttgtgcaacatattagttccatcaacagagaatctccaacaaagaagtgtggaagtgttggaatcc  19398000                                            --------->LBD16                                            --------->ANAC46                                           --------->LBD16                 ---------->DOF2                 --------->ANAC58         <---------LBD16       --------->HSFB2a(1)          --------->ARR14(2)             ------->GAMYB         <---------TOE1(3)         --------->WOX13(1)     --------->LBD16    --------->TOE2(2)  <---------------AGL15 --------->LBD16 --------->ANAC46       --------->MYB46(3)     <---------TOE1(2) ------>NtERF2 <---------ALFIN1--------->LBD16     --------->TOE1(3)  --------------->AGL15 -------->RAP2.6(2)           ----------->RAV1(2)  --------->TOE1(2)--------->MYB52(1) ------>ZAT2  --------->LBD16 <---------LBD16--------->LBD16   <---------TOE2(2) -------ZAT2  --------->At4g35610      -------->P <---------HSFB2a(1)----------------->AGL1     ----- -------At4g35610--------->ANAC58    --------->MYB46(3)        <---------TOE2(3)               <-----   agccgcgatatcaatccgcacacaaacccattccctgaaacaacccccgaaaaccttcgatttcgaaggttaccggttaaagaaaatggaatcgaattta  19398100                                      <---------ZAT14                                      --------->ZAT18                               <-------GAMYB                              <---------MYB46(3)                              --------->MYB111(2)                              --------->MYB55(2)                                             --------                             <--------P                                                      --------                           <---------MYB46(3)                    --------->ALFIN1            --------                          <---------AtMYB61                    <---------O2              <----------- ----->DOF2               --------->ALFIN1                     --------->ALFIN1  --------->ALFIN1 ----AHL20(2)       --------->CCA1(2) <---------ZAT18<---------YAB1           <---------DEAR3(1)    -   aagggaaactggaacattgaagataagagtggttgttgagagcacatacaagagtctgattagagatgtgggagatggagacggtggagagggagaagca  19398200 ---------------->ANAC81                                                                            < ->ANAC58                                                                                           < ->ANAC58                                        <------ZmHOX2a(1)                                  < ----------WRI1                        ---------->DOF2                  --------->MYB111(1)         < --------->DOF2               <------ZmHOX2a(1) ----------->GT1        <--------P                   <   aacaaaggagaaggaagatagaacaagaagaaggagagacacaaagtaagaggagaaacaagagattgagatggtaagtgccattgaagaagagttctca  19398300                                                       --------->At5g28300        *TSS   <---------YAB1                  <---------ATHB12  --------->ALFIN1                        <------NtERF2<-----------HVH21 ---------ANAC58                          --------->At5g28300 ---------bZIP60(2)                      ----------->GT1 ---------ANAC46                       --------->RAP2.6(3) ---------ANAC55(1)          <---------ANAC46 <-----------ARR10                     <---------ALFIN1 ---------ANAC58       <------ZmHOX2a(1)<----------ID1 <-------GAMYB ----------->HVH21     ------>ZmHOX2a(1)   tggcgtgtgaatgttttatgtttgaggagttgtgtttttaagacggcaaatcaacgcggttagagagacatgagacagagacagagacacctccttacca  19398400                                                                   <---------WRKY38(1)                                                                   <---------WRKY45                                                                   <---------WRKY12                                                                  --------->WRKY18(1)                                                            <---------YAB1                                                           <---------AHL20(2)                                                       <---------AHL20(2)                                                      <---------AHL20(2)                                                      <---------AHL20(1)                             --------->YAB1           --------->AHL20(2)                    <---------AHL20(2)    <-----------GT1<---------YAB1   --------->AtMYB61<-----------GT1     <-----------GT1--------->AHL20(2)                     <------   agagaccaaaactaagtcttatttacttcattcatagtgatttttctctattctaaattatttttatggtcaactctttgaaaatttcaacacttacttt  19398500                                                                                    <----------DOF2                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                  <---------RVE1(1)                                                                                 --------->ARR11(3)                                                                                 <---------ARR11(3)                                                                                 --------->ARR14(3)                                      <-------GAMYB                              <---------ARR14(3)            <---------ARR14(2)       <---------MYB46(3)                <---------AHL20(1)     -------            --------->ARR14(2)      <---------AtMYB61                  --------->ARR11(3)    <-------TEIL            ------->TEIL  --------->ANAC55(2)                   <---------ANAC46 --------->ARR14(2)            <---------ARR11(1)     <---------MYB52(1)           <---------ANAC58 <---------ARR14(2)           <---------CCA1(2)      <----------DOF2               <---------ANAC58 <---------AGP1     <------NtERF2        --------->TOE2(3)                  <----------DOF2     --------->AGP1 <---- ----DOF2  <---------ARR14(1)     ------>ZmHOX2a(1)---------->DOF2  --------->AHL20(2)  <-----------GT1   cagtggcatcgtcgtatctaaaaactatacttaatcctttggttgaaacaaaataaagaatgactttcgtttatatattccaagatcttttaacattcat  19398600                                                             --------->ALFIN1                                                     --------->ANAC58                ------------>CBF                 ------>ZmHOX2a(1)                   --------->ANAC58        <------------CBF                --------->TOE2(3)                  ---------->DOF2          --------->ATHB51    <---------ANAC46                            <---------TOE2(3)          <---------YAB1    <---------ANAC58       <------ZmHOX2a(1)  <---------AHL20(2)         --------->YAB1            --    <---------ANAC58 <---------YAB1           --------->AHL20(2)       <---------TOE2(3)      <------ -->YAB1     --------->ARR14(2)              --------->AHL20(2)        <---------ANAC55(2)<---------- -----YAB1   <---------ARR14(2)         <-----------TGA1   <-----------RAV1(1)  ---------->DOF2<-----   aatagggcttgtacaaatccttcatgagaggatgacactcttcgtcatttaatgaaagcaaatgtggcccattaagtataattgaagcccaattaccttt  19398700                                             *TSS                                             <---------ZAT2                                             --------->ZAT2                                          --------->DOF5.7(2)                                          <---------MYB52(1)                                ---------                                        <---------ANAC46                                    ---------                                        <---------ANAC58                                    ---------                              ------------>CBF                                        <---------ANAC58 ------->ANAC46              --------->YAB1 --------->MYB52(2) <-------GAMYB          <---------ANAC58 ----DOF2                 --------->At4g35610--------->At4g35610       --------->YAB1--------------->AtSPL8 -GT1  ------------>CBF   <---------At4g35610<---------At4g35610  <---------At5g28300--------------->AtSPL3 ------HVH21  <---------TOE2(3)         <---------ANAC58   --------->GLK1(2)   ----------------------   cacacagttaacaattaagtttttggtctgatcacaatgtttgcgttagctgcgaaacaagatgctgttacagtcatagaagtcttatgcgtacacgact  19398800  Previous    Next  AGI:  At5g47850.1    Description:  protein kinase, putative. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G55950.1); similar to cytokinin-regulated kinase 1 [Nicotiana tabacum] (GB:AAG25966.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091) Range:  from: 19395927    to: 19398308    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g47860.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G43540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68746.1); contains InterPro domain Protein of unknown function DUF1350 (InterPro:IPR010765) Range:  from: 19398745    to: 19401648    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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