Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->ATHB12                                                                          --------->YAB1                                                                         <---------YAB1                                                             ----------->GT1                                                          --------->YAB1<---------ARR11(3)                                                         --------->ICU4 --------->ARR11(3)         <-                                                         <---------YAB1-------->HAHB4              --                                                    ----------->GT1    --------->YAB1              --                      <------ZmHOX2a(2)            ---------->ID1      <---------ICU4     --------->ANAC58                     --------->AGP1           --------->GLK1(2)       <---------ATHB12    --------->ANAC55(2)                     --------->ARR11(3)     <---------AHL20(2)        --------->ICU4      --------->ANAC46                <-----------GT1            --------->AHL20(2)--------->YAB1               --------->ANAC58            ------->TEIL       <---------YAB1 --------->ARR11(3)  <---------MYB52(2)      <---------ANAC55(2)   agacgaaggaaatgaatgtaacagatcaagcttatgatacagctataaaatctgtcgttataatggtaactaatgatcatagggatagaatcacgaaaca  19391100                               --------->ANAC46                        --------->AHL20(1)                    --------->ANAC58                                   --------->AHL20(2)              <-------TEIL     --------->ANAC58                        <---------AHL20(1)          <---------YAB1       --------->ANAC58                        <---------AHL20(2)      <----------DOF2      --------->ANAC46                           --------->AHL20(2) --------ARR11(3)   --------->ANAC46                     ------>ZmHOX2a(1)   <-----------GT1      <-- ------->ARR11(3)   --------->ANAC58                    --------->TOE2(3)   <-----------GT1   ------- ------->GLK1(2)   --------->WOX13(1)           <---------MYB46(3)    <---------AHL20(2)      <------   aaatctatctttgtgattcatcaagcaatacacaagcctccaaaaactagttgttcatccttatgcgagaaaataaatttaacttctaagtagtatttaa  19391200                                                                               <---------ARR14(2)                              <---------MYB55(2)                          --------->ANAC58                  --------->RAP2.6(2)                                     --------->ANAC58                  ----------->RAV1(1)                                  --------->AtMYB61   --------->GLK1(2)          <---------MYB52(2)                      --------->ANAC58  <---------GLK1(2)           --------->MYB46(3)                      --------->ANAC58 ---------GT1  --------->ANAC58    --------->TOE2(3)               --------->ZAT18        --------->CCA1(2) -->AHL20(2)   --------->ANAC46  ------->TEIL            ----------->GT1---------->DOF2  --------->ARR11(3) ---AHL20(2)   --------->ANAC58------->GAMYB---------->DOF2   ---------->DOF2  --------->ARR14(2) ---   tttcgattctgtgacttaagccacaaattccaacgaaccctaattctaaagtccaaagatagcaaaaagagcaccaaagcaaaaccgtatagatatagaa  19391300                                                                                                  ---                                                                                          <---------ANAC58             --------->ATHB12   ----------->GT1    ---------->DOF2                        <---------ANAC58       >>>>>>>>>TBF1 --------->AtLEC2    <---------ANAC46             ----------->GT1   --------->ARR11(3) ------>ATHB12       ----------->GT1    <---------LBD16    --------->TOE1(2)<-----------GT1       <--   caattggaagaagaatgtttgaaatgcaaaaatagggaaaatttcggagatggaaaagaaacctagaagaaatcgaaaataccgcttggagagcttgaga  19391400                                                   --------->ZAT2                                      --------->GLK1(1)                               <------NtERF2       <---------ZAT2                             <---------DEAR3(1)    --------->ABI4(2)                            <------NtERF2         --------->ALFIN1                            <---------LBD16      <------NtERF2                           <---------RAP2.3(1)  <---------ORA47(2)                           --------                          <---------DEAR3(1)<-----------RAV1(1)                             ---------                   --------->TOE2(2)  <---------GLK1(1)                                 <------NtERF2           ------>ZmHOX2a(2)--------->ATERF1(1)<---------DEAR3(1)                --------->ZAT14  ---           ================================HOX2a_HOX2a                          --------->ALFIN1  <-- ------>HSFC1(2)   --------->TOE1(2)<------ZmHOX2a(1)<---------ANAC46         <---------ANAC46    --- -------HSFC1(2) ------->TEIL<---------ANAC46  <---------DREB2C(2)     ------->TEIL  --------->ATERF1(1)   tggttctccttgatcgacgagcctacgagcggcggagaggaaatctctggcggtgctgggtttgtcgagcatgaacgtttcggtggagtcggcatccatc  19391500       <---------LBD16                                            <----------ID1      <---------LBD16             <---------At4g35610           ---------->DOF2   <-----------HVH21              --------->At4g35610   ----------->GT1  <---------ANAC58       <---------ANAC46              --------->ANAC58                           <--  <---------ANAC58       <---------ANAC58              --------->ANAC46                        ------ ->WOX13(1)              <---------ANAC55(2)           --------->ANAC58                        ------ >MYB46(3)  <------ZmHOX2a(2)    ------->TEIL        --------->TOE1(2)                         ------ -------->RAV1(2)        --------->ANAC55(2)      <---------ARR14(2)                     <---------YAB1 -------At4g35610        <---------ANAC58         --------->ARR14(2)                  <---------ZAT6 ------>At4g35610   <---------AtLEC2 *TSS         --------->GLK1(2)                   --------->ICU4   atctgcgtctcgggatcactgttcatggcgtaatgcatctgcgaatggagagaatccaaggaaaaaaaaagacaaggagagactagtagtgatgaaaacg  19391600                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                            ---------     --------->GLK1(2)                                                                      <--------    --------->ARR14(2)                                                                  --------->AHL20(2)    <---------ARR14(2)                            <-----------GT1         <----------DOF2--------->AHL20(2)   <------ZmHOX2a(1)                     ----------->RAV1(1)           <---------ALFIN1 <---------AHL20(2) ---------RAV1(2)                        ------>NtERF2           <---------LBD16    --------->AHL20(2) --->ANAC58                             <---------ETT(1)     <---------AHL20(2)  --------->YAB1 --->ANAC46                             ----------->HVH21  <---------ANAC55(2)  <---------ATHB12<---- --->ANAC58          ---------->ID1     --------->ANAC46   --------->ANAC55(2)--------->WOX13(1)-----   ccagaggattctagcaacttcttgtctcattccctaatttctccgacaaattatacctcttatgtaattcggaacactttcaatcaaaaaataaataatt  19391700                                                                                           <---------ATHB12                                                                                <---------AHL20(2)     --------->GLK1(2)                                                         --------->ARR11(3) --ICU4                                                                        <---------ARR11(3) >ICU4                                                                         <---------AHL20(2) -ATHB51                     ---------->DOF2          --------->ANAC58         --------->AHL20(1) >AHL20(2)          --------->AtLEC2                  --------->AtLEC2         <---------AHL20(1) -AHL20(2)          --------->ANAC58                  --------->ANAC46         --------->AHL20(2) -----AHL20(2)      --------->ANAC58                  --------->ANAC58        --------->AHL20(2) ---->AHL20(2)      --------->ANAC46    <---------LBD16              <---------ICU4  <-----------GT1   aaaaactaatctgaacattttcaagcaaaaaaaaagaagaaattcggaacattttcaagcaaaaaaaaaactaattacaaatatatttaacaaatcatgg  19391800                                                            --------->AHL20(1)                                                            --------->ARR11(3)                                                     ----------->GT1                   <---------ANAC55(2)             <---------ANAC46                   --------->ANAC55(2)             ----------->GT1           ------>ZmHOX2a(1)                      --------->DAG2                               <-----          --------->TOE2(3)                   ----------->GT1                               ---------          --------->TOE1(3)         <---------At5g28300    --------->AHL20(2)--------->HSFB2a(2)         <---------ICU4      --------->AHL20(2)  ---------->DOF2             <---------HSFB2a(2)   aacatagataatccttagaatacatattcaaaaaaattcacagcaatagggtaaagtgtaaatatatggtcttaattttgtagaacatatcaaattagaa  19391900                                                                        <---------AHL20(1)                                                                   ------>ZmHOX2a(2)                                                             --------->ANAC55(2)                                                       <---------AHL20(2)          --------->HSFB2a(2)                          --------->AHL20(2)--------->AHL20(2)          <---------HSFB2a(2)                         --------->YAB1    --------->AHL20(1) <---------HSFB2a(2)                              <<<<<<<<<EIN3  <---------ARR11(3) --------->HSFB2a(2)                     --------->ARR11(3)  <---------ANAC55(2) ----GLK1(2)               <---------AHL20(2)    ----------->GT1 --------->ARR11(3) >YAB1 <----------DOF2  --------->YAB1   <---------ARR11(3) <-------TEIL<---------AHL20(2)   tttctgaaacttttagaacatgtcaattttaaaatgagtagaacatctacaatgtataaaaatacatgatctaaaatatttagaatttagacaaaaatta  19392000  Previous    Next  AGI:  At5g47830.1    Description:  similar to hypothetical protein MtrDRAFT_AC150207g26v2 [Medicago truncatula] (GB:ABD32636.1) Range:  from: 19390124    to: 19391537    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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