Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                         --------->YAB1                                                                                   <-------TEIL  <---                                                                                 --------->ARR11(1)                                                                           ---------->DOF2       <---                                                                        <----------ID1 <---------ARR14(2)  ---------->DOF2      --------->WRKY18(1)                         --------->ZAT14--------->CCA1(2) --------->DOF2--------->TOE2(3)                                   --------->REM1(2)   --------->ARR14(2) ->ARR14(2) ----------->RAV1(1)                       ------->TEIL <---------ZAT14--------->GLK1(2)   gccaaagagcaatacaacataaatagtcaagccgattatcgaaccagagtagcatgaatattagcccagtgaagacgaaaagagattcgaatcggaatta  19368100                                                                               <------NtERF2                                                                              ------>NtERF2                                                                              --------->LBD16                                                                             ------->GAMYB                                                                             --------->ANAC46                                               <---------AHL20(2)           <---------MYB55(2) ------ANAC55(2)                     <---------ANAC58                       --------->MYB46(3) ------ANAC58                        <---------ANAC58                      --------->At4g35610<------ ------ANAC46                        <---------ANAC46                      <---------At4g35610<------ ----->ANAC55(2)             <---------ANAC55(2)                        ----------->HVH21     <------ ------ANAC55(1)             --------->ANAC55(2)                       <-----------HVH21     <------- ------ANAC58        ----------->HVH21      ----------->GT1      <-----------GT1<---------ANAC46<----   cgtgaatgtgatttcgaatgactctgacaatacgttttgacttgtgtagtttattgtatattcagtttaactctgtcacccgccgtgttcaaccttgctg  19368200                                                                                      <---------MYB46(3)                                                                                     <---------AtMYB61                                                                                     <---------YAB1                                             <---------ZAT14                     <------MYB83                                             <---------ZAT18                     <------MYB46(1)                                             --------->ZAT14                    --------->MYB46(2)                                        <---------ZAT14   --------->ZAT18       --------->MYB111(1)    --------->GLK1(1)                   <---------At4g35610                <-----------RAV1(2) ---ANAC58                          --------->ANAC58  <---------------AtSPL8    --------->MYB111(2) ---ANAC46                          --------->ANAC46  --------------->AtSPL3    --------->MYB59 ---ANAC58             --------->YAB1   --------->ZAT14   <---------ZAT18<-----------GT1 --ZAT2   <-----------RAV1(2)       --------->ANAC58  --------------->AtSPL8   <---------MYB55(1) -----MYB46(3)<--------P  <---------ICU4--------->At4g35610      --------->ZAT6<--------P   gttcagagttccacaggtaagtttttcataattttctcacgctgcagtccacttgagtagtactctaacacaatgttacaggttggtatggttgccatca  19368300                                                <---------ANAC58                                                <---------ANAC55(1)                                                <---------ANAC58                                               <---------LBD16                                               <-----------------------TaNAC69(2)                                             <---------ARR14(2)                                             --------->ARR14(2)                                            <---------GLK1(1)                             --------->CCA1(2)                                            --------->GLK1(1)                            <---------ARR14(2)                                <---------ARR14(2)                            --------->ATHB12                                --------->ARR14(2) --------->REM1(2)   -------->ZAP1     --------->ARR14(2)                                <---------GLK1(2)--------->LBD16  --------->YAB1        =============                               <------ZmHOX2a(1)<---------ANAC46--------->ARR11(3)  <<<<<<<<<MYB98 <-                    --------->YAB1    ---------->DOF2---------->DOF2 <---------WRKY18(1)<------ZmHOX2a(1)   acgatgggattctacttcgtaatcacatccacaggattctcaaagcatttccgtgaaaagccttactatcttgacctagttgatttgttaggatatgaaa  19368400                                                                                                -----                            <-------TEIL                                                      -------      ------>ZmHOX2a(2)   <---------SPL7   <---------ANAC55(2)          <---------AHL20(2)    <------ ============HOX2a_HOX2a<---------------AtSPL3 --------->DAG2  <---------At4g35610     --------->ARR11(3) ----------GT1          <---------------AtSPL8---------->DOF2  --------->At4g35610     <---------ARR11(3)   ttcactgatccataaaaaaaaacataggggtacgtttagaagaatacataaagtatagggactgaagctgcaaatttatgttctcagtagatgttcgatc  19368500                                                          ----------->GT1                                                          <---------ANAC55(2)                                                       <------ZmHOX2a(2)                                            <---------ANAC46                 ---------->DOF2                                            <---------ANAC55(2)      --------->ETT(2)       <------------CBF                     <---------ANAC58         --------->WRKY38(1)         <--- ->ZmHOX2a(2)     *TSS--------->GLK1(1)     <---------ANAC58   --------->ARR14(2)       --------->ATHB12 -->ARR11(3)     ----------->GT1           --------->MYB52(2)  <---------ARR14(2)---------->DOF2 <--- ---ARR11(3)  ---------->DOF2          ----------->GT1--------->ARR11(3)  ----------->GT1   <--------   tttggacagaattgaagaaaggagaaaccctagactgagtctggttacttgaaggggatcatgtgaatacgtcgactggtaaagaaagaaagattgctgc  19368600                               ------>ZmHOX2a(2)                              --------->ARR14(1)                              --------->CCA1(2)                              <------ZmHOX2a(2)                             --------->ARR14(3)                             <-----------ARR10                             <---------AGP1                             <---------ARR14(3)                                                     -                             --------->GLK1(2)                                                     <-                             --------->ARR11(3)                                                   ---                             --------->AGP1                                                     <----              <---------HSFB2a(2)                                                              ------          <---------GLK1(2)  <---------ARR11(3)                                             ------>ZmHOX2a(1)          --------->ARR11(1) <---------ARR14(2)                                         <---------ARR14(2) -------DOF2  --------->HSFB2a(2)     ----------->HVH21            --------->ARR14(2)   --------->ARR14(2) ------DAG2 <-------TEIL   ----------->ARR10                       <---------ARR14(2)  --------->GLK1(1) -At4g35610--------->CCA1(2) --------->ARR14(2)                <---------LBD16         <---------GLK1(1)   tttttagatttagattcgagaatgtatggaagatctggtcttgacaggtttaagaagtcccaaacttcggaacccttctctgtatcagcaaatcctcctc  19368700                                                                  --------->YAB1         ----------->RAV1(1)                                     <---------ATHB12     --------->REM1(1)                                         --------->WOX13(1)           <-------GAMYB <---------MYB46(3)       <------NtERF2                      --------->WRKY18(1)            ========= -------->ALFIN1      --------->LBD16                      ----------->GT1                 <---------MYB46(3) --------MYB52(1)   <---------LBD16                     <---------ZAT2               <---------WOX13(1) ------>LBD16   <-----------HVH21  <------NtERF2        --------->ZAT2             --------->ATHB12 -----LBD16  --------->At4g35610 --------->ETT(1)       --------->At4g35610       ----------->HVH21 >ZmHOX2a(1)<---------ARR11(3) <-----------HVH21        <---------At4g35610     ----------->RAV1(2)   cggtggtacaacaacatctgtctccggaggcattgtcggggcaaaaaactcagattggagctggtcaatcaaactggcatccccctgattgggcgattga  19368800                                                 --------->ATHB12                                             ------>ZmHOX2a(2)                        --------->LBD16                                            <------ZmHOX2a(2)                        --------->HSFB2a(2)                                           <---------ARR14(2)                        <---------HSFB2a(2)                                           <---------ARR11(3)                       <---------LBD16                                           --------->ARR14(2)                  <-----------ARR10        <---------MYB52(1)                 --------->AGP1<-------TEIL          <---------ARR14(2)       --------->LBD16                     --------->ARR11(3)                  <---------ARR11(3)      <---------DEAR3(1)            <---------RAP2.6(2)<---------ARR14(2)      --------->ARR11(3)  ------->PIF5                 ---------->DOF2--------->TOE2(3)                <---------ARR11(1)  <-------PIF5      <---------HSFB2a(2)    <---------GLK1(2)                   --------->ARR14(2) =========================================bZIP_DOF  ------>ZmHOX2a(2)         <---------CCA1(2) --------->TGA1a    --------->HSFB2a(2)  ----------->ARR10        --------->CCA1(2)<---------LBD16 ==========MYC_MYB <---------LBD16 --------->RAP2.6(3) --------->ARR14(2)     --------->GLK1(1)   gcctcgtgccggtgtctactctctggaagttgtgaaagacggccagatccttgatcggattcatctagatagacgaaggcatatcttcgggagacaacat  19368900                                                 <------NtERF2                                                 <-----------RAV1(2)                                                ------>NtERF2                                                --------->LBD16                                               ----------->RAV1(1)                                         <------NtERF2                                         <---------ZAT2                                         --------->ZAT2                                        ------>NtERF2                                     ------>NtERF2                                     --------->LBD16                     <------MYB46(1)                                    --------->ANAC58                     <------MYB83                ------>ZmHOX2a(1)   --------->ANAC46       ------>ZmHOX2a(1)  <-----------HVH21             ---------->ID1         --------->ANAC58 <---------MYB46(3) <---------TOE1(2)     <---------YAB1  --------->YAB1<---------LBD16 <-------GAMYB       <-----------RAV1(2)         --   cagacttgtgattttgtccttgatcatcagtctgtttcccgccagcatgccgcagttgttcctcacaagaatggcaggtttgtcatcgctactcaattct  19369000  Previous    Next  AGI:  At5g47790.1    Description:  forkhead-associated domain-containing protein / FHA domain-containing protein. similar to forkhead-associated domain-containing protein / FHA domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G38840.1); similar to hypothetical protein OsI_027774 [Oryza sativa (indica cultivar-group)] (GB:EAZ06542.1); similar to Os08g0326100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061548.1); contains InterPro domain Forkhead-associated (InterPro:IPR000253); contains InterPro domain SMAD/FHA (InterPro:IPR008984) Range:  from: 19368518    to: 19370670    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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