Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->MYB52(1)             ----------->HVH21            <---------MYB52(2)           <---------At4g35610                                   --------->ZAT14           --------->At4g35610                                   --------->ZAT18       <----------DOF2                                           <---------ZAT18     <---------YAB1                                              <---------ZAT14    <---------ARR11(3)                                         --------->ANAC58    --------->ARR11(3)                                         --------->ANAC46  --------->At4g35610   --------->YAB1                                              --------->ANAC58  <---------At4g35610 ------->AHL20(1)                 <---------ANAC58  <------ZmHOX2a(2)     <------ZmHOX2a(2) ------->AHL20(2)                 <---------ANAC46 --------->ARR11(3)    <---------ARR11(3) --------AHL20(2)                 <---------ANAC58 <---------ARR11(3)   --------->GLK1(1)        <--- ------>AHL20(2)    ---------->DOF2       --------->TOE2(3)--------->ANAC46     ----------->RAV1(1)   attaattatctttagctaacgggaaagacccatattccttgaaaccctagtaagatcatacacacagggcacagagatcaaacagcagaaaactaatgtc  19359200                                                                                               ------                                                                                              <------                                                                                              -------                                                                                             ------>ZmHOX2a(2)                                                                                            <------ZmHOX2a(2)                                                                                            ---------                                                                                           --------->AGP1                                                                  ------------------------>ANAC81                                                             ------>ZmHOX2a(2)             <---------ARR11(3)                        ----------------->AGL1               ============================HOX2a_HOX2a                       ----------------->AGL1               --------->CCA1(2)              <---------AGP1                      <------ZmHOX2a(2)                     <------ZmHOX2a(2)              <---------ARR14(2)                     <---------ARR11(3)                     =============================HOX2a_HOX2a                     <---------ARR14(2)                    --------->ARR14(2)              --------->ARR11(3)                     --------->ARR14(2)                    <---------ARR14(2)              --------->ARR14(2)                     --------->ARR11(3)                    <---------ARR11(3)             <---------GLK1(1)                    <---------GLK1(1) --------->ANAC55(2)  <---------AGP1                 --------->GLK1(1)               --------->DAG2         ----------->GT1      --------->AGP1         <------ZmHOX2a(1)        ----------->GT1------>ZmHOX2a(2)        --------->At4g35610               ==================HOX2a_HOX2a <---------TOE2(3)  --------->At4g35610         <---------At4g35610       --------->YAB1 ----------->ARR10 -------DOF2  ---------->DOF2         <---------ANAC55(2)  --------->ARR11(3)     =================HOX2a_HOX2a   tttgatgttgaagtaaaaaagcagatcccaaatgggagaaacgtgatttcagatggaagaagatctaaaatgagaagaataagaggagagagagatctgg  19359300                                                                                                    -                                                                                                <----                                                                                               ------                                                                                             --------                                                                                     <---------At4g35610                                                                               >>>>>>>>>GATA-3 ------                                                                               >>>>>>>>>GATA-2<------                                                                               >>>>>>>>>GATA-4-------      ---------->DOF2                                                          >>>>>>>>>GATA-1------- ----->GT1                                                              <---------ANAC46     <------- ---HSFB2a(2)     <----------DOF2                        <------ZmHOX2a(1)--------->ALFIN1   <------- -->HSFB2a(2)--------->At5g28300     ---------->DOF2 <------ZmHOX2a(1)  <---------ANAC58     -------- >CCA1(2)   ----------->GT1 --------->GLK1(1)     <------ZmHOX2a(1)     <---------ANAC58    ---------   aaacaaggtaaaggcagtaactttagggagaaaccctagaaaagaagagagaggaggaaggagatagataccttgggtgtggattgaagcagagaagatt  19359400  ----------->GT1 --------->DAG2 --------->DOF2 ---TEIL --->ARR14(1) ->HSFB2a(1) --->CCA1(2)                                                                 <---------MYB52(1) ---ARR14(2)        <----------DOF2                                  <---------ALFIN1 -->ARR11(1)   <---------At4g35610                                   --------->REM1(1) -->ARR14(2)   --------->At4g35610                                 <-----------HVH21    <---------ALFIN1 --HSFB2a(1)  <---------MYB46(3)             <---------ANAC58    --------->At4g35610  <---------ALFIN1 --HSFC1(2)  <--------P   --------->AHL20(2) <---------ANAC46    <---------ZAT2      --------->ZAT14 ->HSFC1(2)--------->ATHB12                  <---------ANAC58    --------->ZAT2      <---------ZAT14 -->ARR10  <---------MYB46(3) --------->AtLEC2                   <---------At4g35610 <---------REM1(2)   cgaaaagtagaaatggttgctgcttcaattacatgcactcttagattgagtgagtgatcaacttctcagcttcacctctgtttgctctacacacttctca  19359500                  --------->ANAC58             --------->ANAC58             --------->ANAC46             --------->ANAC58           --------->ANAC46          --------->TOE1(2)                ------>ZmHOX2a(2)         --------->ANAC58                 <------ZmHOX2a(2)         --------->ANAC58       --------->DAG2   <---------At5g28300                             <---       --------->GLK1(1)      ---------->DOF2 <-----------HVH21                                  <---       --------->CCA1(2) --------->LBD16 --------->ARR14(2)                                     -----      <---------GLK1(2) --------->ANAC58 --------->ARR11(3)           <----------DOF2   --------->YAB1      <---------ARR14(2)--------->ANAC46 --------->GLK1(2)      <----------DOF2         ----------->GT1      --------->ARR14(2)--------->ANAC58 <---------ARR14(2)    <---------DAG2          *TSS    ------    --------->LBD16    <---------LBD16  <------ZmHOX2a(1)   <---------ALFIN1         --------->YAB1  <---------LBD16 --------->ANAC58 --------->ALFIN1      --------->MYB46(3)         <---------YAB1---   tttcgccggatacgcacgacaagaacccggaagaaagggggaggatccagtcacagccaacaacacctttcgctttgtttttgtttataatagtaaaaaa  19359600     <----------DOF2   ------->TEIL ------ATHB51 ------AHL20(2)                                                      ------>ZmHOX2a(1) ---->AHL20(1)                                      ---------->DOF2  --------->LBD16            ----- --->YAB1                                    --------->DAG2   <---------AHL20(2)    <----------ID1 ------>MYB52(1)    >>>>>>>>>>GATA-1        ---------->DOF2----------->GT1        ---------->DOF2   taatggactttaatgccatctcgatttcaaacaaaaaaaaaaaaaaaaaagtgagaaagaatagttaattcctgaatttcttagaaaagacaaatgttat  19359700                                --------->ZAT14                                <---------At4g35610                                --------->At4g35610                                <---------ZAT14                                <---------ZAT18           <---------GLK1(2)    --------->ABI4(2)                                 ---------->DOF2        <---------WOX13(1)  --------->ANAC46                                --------->HSFB2a(2)     <---------YAB1        <---------LBD16                               <----------DOF2           --   --------->YAB1          <---------At5g28300                          <---------ANAC58      -------  <---------ATHB12        <-----------GT1                  ---------->DOF2  <---------HSFB2a(2)    --  --------->ICU4    <---------AHL20(2)          --------->At4g35610     <---------ANAC58      ------- ---->AtLEC2   <---------YAB1  --------->ALFIN1 <---------At4g35610     <---------ANAC46      -------   gcaaatgatgatagattatgttttaatttcacggtgcagacaaactagacatctgtgttagtaaagcatcaatggctttgagaagaaagagagaacaagg  19359800      --------->ANAC58      --------->ANAC58    ---------->DOF2   --------->ANAC58                                               ---------->DOF2 ------->ANAC58       --------->ANAC55(2)                                --------->At4g35610 -->ANAC46            --------->ANAC58                                   <---------At4g35610 ------->ANAC58   <------ZmHOX2a(1)<-----------GT1                      ----------->RAV1(1) --------- -->ANAC58       <----------ID1 --------------->AtSPL8          ---------->DOF2--------->HSFC1(2) -->ANAC58 --------->ICU4   <---------AHL20(2)             <----------DOF2     <---------HSFC1(2)   catgctaaaagcaaatattaggacaagtatttgatttgtactctcttccctcattatgttcctttgcaaagacacagcagaaacatccaaagtgaagatg  19359900                                           --------->bZIP60(1)                                   ------>NtERF2                                <---------At4g35610                                --------->At4g35610                            <---------ARR14(2)                            --------->KAN4(2)                            --------->ARR14(2)                           --------->HSFB2a(1)                           <---------HSFB2a(1)                           <---------HSFC1(2)         <---------RAP2.6(3)                           <---------KAN4(1)         <---------ANAC58                           <----------TaMYB80        <---------ANAC46          <---------AHL20(2)                           --------->KAN4(1)     ------->MYC3                  <-----------GT1                          <---------KAN4(2)<---------bZIP60(1)            <---------AHL20(2)     <---------ICU4       ---------->TaMYB80     <-------MYC3       <---------DAG2     --------->YAB1  --------->At4g35610   --------->ANAC46        <---------HSFB2a(1)  --------->YAB1     <---------At4g35610 --------->YAB1<---------MYB52(1) <---------YAB1 <-------TEIL       --------->ALFIN1  --------->WOX13(1)           --------->HSFB2a(1)       <------- >ICU4        <-----------RAV1(2) ----------->HVH21  <---------ANAC58<----------DOF2         --------   agtttcatcatcacttgcaggggagcggaatattcgctgacaatcacatcacatgccgtttggattggaacctttttttattaacttaagtcgagagctc  19360000                                        <-----------HVH21                                       --------->ANAC46                                     --------->ANAC58                                     --------->ANAC55(2)                                     --------->ANAC55(1)                                     --------->ANAC58                 ---------->DOF2                                     <---------ANAC55(2)           <----------DOF2        <<<<<<<<<<<                                     --------->ANAC46       <---------ZAT2            --------->YAB1     ------>ZmHOX2a(1)         <---------YAB1               --------->ZAT2         ----------->GT1 --ZAT14                      <-----------GT1       <---------HSFB2a(2)        --------->ZAT6 ->ZAT18   <-----------GT1   --------->YAB1         --------->HSFB2a(2)     <---------------AGL15   -   tgtgttcctcgatttacatttttggtttctattatcaatacgcatcacatgtttctggactaagcagggctataaaggctaatactagtaataaacaatg  19360100  Previous    Next  AGI:  At5g47750.1    Description:  protein kinase, putative. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G26610.1); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G55910.1); similar to hypothetical protein OsJ_028605 [Oryza sativa (japonica cultivar-group)] (GB:EAZ45122.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45154.1); similar to hypothetical protein OsI_030728 [Oryza sativa (indica cultivar-group)] (GB:EAZ09496.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (In Range:  from: 19356929    to: 19359587    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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