Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ANAC58                             --------->ZAT6                    --------->TOE2(3)                    --------->MYB52(2)                --------->ATHB51                  <---------MYB52(1)      --------->MYB52(2)  --------->REM1(1)                <---------YAB1 --------->ANAC58      <---------YAB1            <---------ANAC58               <---------TOE2(3) ----------->HVH21 --------->YAB1       --------->ARR11(3)       <---             <---------AHL20(2)--------->ANAC46  ----------->GT1     --------->ZAT14       --------->ALFIN1       ----------->GT1  ----------->GT1 <---------MYB52(1)  ----------->RAV1(1)<---------ANAC58 <----   gtagcaatagggtattttatgttagtttgtaacacgagacccgtttgtgactagtataattgcaacatcagtatggtcttgtcttgtttccaagtgtgcc  19348500                          <---------HSFB2a(1)                         --------->GLK1(2)                        <---------GLK1(2)                                          <---------ANAC46                       <------ZmHOX2a(1)                                           <---------ANAC58                 <---------AHL20(2)                                                <---------ANAC58                --------->AHL20(1)            <---------At4g35610         <-----------GT1                <---------AHL20(2)            --------->At4g35610        <<<<<<<<<<GT-3b      <------ -------DOF2    <---------AHL20(1)  <-------TEIL   --------->YAB1   ------>ZmHOX2a(1) <---------ZAT14 ------DOF2     --------->AHL20(2) --------->CCA1(2)               --------->TOE2(3)--------------->AtSPL8   tttgtgactactcaccaatttattaggaatctttgagatacattgttctgctctcatcacttagctcttccttatttttcttcttgtgtgtacattttga  19348600                                     <---------CCA1(2)                                   --------->YAB1                               --------->GLK1(2)                    <---------HSFB2a(2)             -                              <---------ARR14(2)                    --------->HSFB2a(2)            --                    <---------YAB1<---------YAB1                   <---------LBD16                 --                  --------------->AGL15                           ================================RAV                  <---------------AGL15                           ----------->RAV1(2)              <-       --------->LBD16        <---------GLK1(2)             <---------AHL20(2)                 <-----      <-----------RAV1(2)     --------->ARR14(2)            --------->AHL20(2)           ---------->DOF2 ---YAB1        -------->P   <---------At4g35610         --------->YAB1               ----------->RAV1(1)   tggaaactccaggtaaactaccatcaatggcagattctcataactctctaccttcttaataataaaacacctggaagaaattatctggcaacaaagctat  19348700                                                      --------->ANAC58                                                      <---------ALFIN1                                                      --------->ANAC58                                              <-----------HVH21                                              <-----------TGA1                       <---------ETT(1)      <---------O2                       --------->DREB2C(2)   --------->ANAC58                       --------->DEAR3(1)    --------->ANAC55(2)                       --------->At1g77200   --------->ANAC46                       ----------->HVH21     <---------ANAC55(2)                      --------->DEAR3(2)     <---------ANAC58                      <------------AtMYB77   =========================bZIP_DOF                      =================================MYC_MYB                      --------->MYB46(3)     =========================bZIP_DOF              <---------AtMYB61              --------->ANAC58              <---------DEAR3(1)             --------->TGA1a              --------->ALFIN1               <---------ANAC58                            <----------DOF2           --------->ALFIN1                  <---------TGA2(1)                     <---------DAG2           <---------AtMYB61                 --------->TGA2(1)                     <----------DOF2           <---------DEAR3(1)                <---------TGA1a                      <---------DAG2 -------------->ANT --------->ARR14(2)       --------->bZIP60(1)            <---------ARR14(2) ------->ANAC58     --------->TCP20          <---------bZIP60(1)      --------->ZAT6   ---------->ID1 ------->ANAC58<---------MYB46(3)            --------->O2  <----------DOF2  --------->ARR14(2) --------ANAC55(2)  <---------ARR14(2)<---------CCA1(2) <---------ALFIN1   <---------CCA1(2)     ---- ------HVH21<---------MYB46(3)--------->YAB1<-----------STF1   ---------->ID1  <---------ALFIN1------   cacgcataccaaggtggtggtggaaccgacactgatattggtatcttacgtcacacacacactttgttgttatctctatatccacctttttctttttggc  19348800                                                                           --------->DAG2                                                                   --------->AtMYB61                                                                   <---------MYB111(2)                                                                   <---------MYB55(2)        ------>ZmHOX2a(2)              --------->ZAT6              <---------MYB111(1)        ==========================HOX2a_HOX2a                      <---------MYB46(2)      --------->ARR11(3)          --------->YAB1                   --------->MYB46(3)      <---------ARR11(3)          --------->TOE1(3)               --------->ANAC58    <---------YAB1          --------->ANAC46                      --------->ANAC58  <---------ICU4            --------->TOE1(1)                    ------>NtERF2  --------->YAB1           ------>ZmHOX2a(1)               --------->At4g35610     <---------ANAC58 <---------ATHB51          ===============================HOX2a_HOX2a------>MYB83  <---------ANAC46 <---------ATHB12      --------->ARR14(2)  --------->ANAC58<---------At4g35610     <---------ANAC58 --------->ICU4        <---------ARR14(2)  --------->ANAC58----------->RAV1(2)--------->ALFIN1 -------->CBF  <----------DOF2    --------->TOE2(3) *TSS------>ZmHOX2a(1)---------->DOF2 ---->ID1      ----------------------->TaNAC69(2)  ------>ZmHOX2a(2) ------>MYB46(1)               <-   tcaattatgatctctctctttctcgtttcctcgtaatcttaacacaagcttgatcgtcctcatctgccaccaaaccaaaggtgatgcgttttcttagcca  19348900                                                                                             --------                                                                                            ---------                                                                                            ------>NtERF2                                                                                           <---------ALFIN1                                                                                          --------->DEAR4(2)                                                                                          --------->ATERF1(1)                                 <---------ICU4                                           <------NtERF2                              --------->YAB1                             <---------DEAR3(1)--------->DEAR3(1)                         <---------GLK1(2)                       <---------ICU4          <---------RAP2.3(1)                       <---------YAB1                           --------->ICU4           <---------ATERF1(1) --------ARR11(3)   <----------DOF2                           --------->YAB1       <---------AtLEC2   agaactcaaacttgtgatatttcttttgattctcatcatctctgcattttctgaattggctcagacataatttcttcggtgacttccatggctccgcctg  19349000                                                                                                    =                                                                                                <----      --------->KAN4(2)                                                                  <---------ANAC55(2)     <---------ICU4                                                                      --------->ANAC55(2)    <---------YAB1                   <-----------GT1                                  <------ZmHOX2a(2)  <---------At4g35610     <-------TEIL   ------>ZmHOX2a(1)                            ===============  --------->YAB1         <---------ARR14(2)                                        <------MYB83<----- --->RAV1(2)             --------->GLK1(2)                                       <--------P ------->TEIL >LBD16      --------->SPL7 <----------DOF2    <----------DOF2      <-----------GT1<------MYB46(1)  -   tctctgatgattccctacagcctcgaggttctttctgtttctccttcttctttttgttctgtttcagtttctactgttttctggttggatcatgtattta  19349100                                                <---------At4g35610                                           --------->ZAT18                                          <---------ANAC46                                          <---------ANAC58                  --------->ANAC58                                          <---------ANAC58              <------NtERF2                                          --------->ALFIN1             ------>NtERF2         <---------At4g35610            <---------ANAC46              <---------ANAC58         --------->At4g35610            --------->ALFIN1              <---------ANAC58        ----------->RAV1(1)           --------->LBD16                 <---------ANAC46      ------>ZmHOX2a(2)             <---------LBD16                <---------DEAR3(1) ============HOX2a_HOX2a          <---------ARR14(2)               --------->ALFIN1 -------GT1                       --------->ARR14(2)    <-----------RAV1(1) --------->ANAC58 ======HOX2a_HOX2a            <---------ZAT14<---------ZAT14 <---------ANAC46                <------- ------GT1                    --------->ZAT14<---------At4g35610 --------->ALFIN1     <---------ZAT18 ----->ZmHOX2a(1)       <-----------GT1<---------MYB52(1)  <---------ANAC46--------->SPL7    <-------   tcctttgatccagcagtaatggctacttacagttcagttccggtgtgtgcagatgtttgtgttgtgggagtggcgcgaacgcctataggggacttccttg  19349200                     --------->REM1(1)                 --------->At4g35610            --------->WRKY38(1)                        ----------->GT1                      ------>NtERF2 --ANAC58   --------->WRKY12              --------->AtLEC2                            --------->At4g35610 --ANAC58 <----------DOF2        <-------TEIL <---------TOE2(3)                       <---------At4g35610   gctccctctcgtctttgactgctacaagacttgggtccatagccatccaaggtagtttagttatacgactactctctgtctctctctctgcttcggccaa  19349300                                                        --------->LBD16                                                      <---------LBD16                                              <-------MYC4                                              <-------MYC3                                              ------->MYC2                                              ------->MYC3                                              <-------MYC2                                          <---------ZAT18       --------->HSFB2a(2)                 -                                          --------->ZAT18       <---------HSFB2a(2)                 <                               <---------ALFIN1       ------>ZmHOX2a(2)                <---------ARR11(3)                             --------->RAP2.6(2)    <---------ARR14(2)        <----------DOF2      --                             --------->DEAR3(1)     --------->ARR14(2)  <---------ARR11(3)       ---- <---------YAB1       <---------YAB1      <---------ZAT14------>NtERF2  --------->ARR11(3)     ------   gttttcattctcttactgtttcttctcatagccgcacttaagagagcacatgttgatccggcccttgtggaagaggtcttctttggcaatgtcttaactg  19349400  Previous    Next  AGI:  At5g47710.1    Description:  C2 domain-containing protein. similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G70790.1); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G70790.2); similar to C2 domain containing protein [Brassica oleracea] (GB:ABD64985.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 19346901    to: 19348555    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g47720.1    Description:  acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative. Identical to Probable acetyl-CoA acetyltransferase, cytosolic 2 [Arabidopsis Thaliana] (GB:Q9FIK7;GB:Q3E710;GB:Q3E8F1); similar to ACAT2/EMB1276 (ACETOACETYL-COA THIOLASE 2), acetyl-CoA C-acetyltransferase [Arabidopsis thaliana] (TAIR:AT5G48230.1); similar to ACAT2/EMB1276 (ACETOACETYL-COA THIOLASE 2), acetyl-CoA C-acetyltransferase [Arabidopsis thaliana] (TAIR:AT5G48230.2); similar to cytosolic acetoacetyl-coenzyme A thiolase [Nicotiana tabacum] (GB:AAU95618.1); similar to acetoacetyl-CoA thiolase [Picrorhiza kurrooa] (GB:ABC74567.1); similar to acetyl Co-A acetyltr Range:  from: 19348852    to: 19351653    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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