Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                       ----------->HVH21                                                                      --------->LBD16                                                                     ================================                                                                     <---------O2                                                                     --------->O2                                                                     --------->TGA1a                                                                     <---------TGA1a                             <---------ANAC58                        --------->ANAC58                          --------->ZAT14                            --------->ANAC55(2)                        <------NtERF2                                <---------ANAC55(2)                       ------>NtERF2                                 --------->ANAC46                      <---------ALFIN1                              <---------LBD16                      --------->DEAR3(1)                           --------->MYB52(1)                   --------->ANAC55(2)                  <---------MYB46(3)                   --------->ANAC55(1)                  <---------REM1(1)                   --------->ANAC58                     <-----------RAV1(1)--------->TOE1(2)                   <---------ANAC55(2)      --------->ANAC58      ------>ZmHOX2a(1)                   --------->ANAC46         --------->ANAC46      ----------->HVH21                   --------->bZIP60(1)      --------->ANAC58      <---------REM1(2)             -----                   <---------bZIP60(1)    --------->MYB52(1) <---------ANAC58              <---------ARR14(2)                   --------->ANAC58     --------->DEAR3(2)   <---------ANAC46             ===========            <-----------HVH21<---------ANAC58        --------->ALFIN1--------->ANAC58     <------ZmHOX2a(1)      ----------------------->TaNAC69(2)--------->MYB46(3)   <---------ANAC58    <---------GLK1(1) --   ggatgagtcatctcggtcatcacgccaccgtacttgtcttgaacagacggaagcagtgttgttgcgtcctcacgggacatgggatttgtggaggaactag  19329300           ------>ZmHOX2a(2)         <---------AGP1                                                                  <---------YAB1         <---------ARR14(2)                                                           <---------YAB1         ------->TEIL                                          <------ZmHOX2a(1)    <---------ICU4         --------->ARR14(2)                                 <------NtERF2          <---------YAB1   <---------ARR14(2)   --------->ALFIN1                   --------->LBD16         --------->ICU4 ======bZIP_DOF      --------->ALFIN1                 --------->MYB46(3)      ------>NtERF2  <------- ----->DOF2==============HOX2a_HOX2a                <-----------HVH21       --------->ATERF1(1) =================HOX2a_HOX2a           --------->ANAC58 <---------LBD16    --------->RAP2.6(3)  ---- ------->At4g35610------>ZmHOX2a(1)     --------->ANAC58--------->At4g35610<---------ATERF1(1) ------   aagcagacatggatctgttcctcgtggtggagcaactgtgaaacgcagagaacccatcagccggaggaaaacgaagacgacggccattattcttattaca  19329400                                             --------->YAB1                                             --------->ATHB12                                             <--------HAHB4                                             <---------ICU4                                            --------->ICU4                                            <---------YAB1                                        <------------------ATHB9                                       --------->ANAC58                                  --------->ANAC58                                            <------                 --------->TOE2(3)--------->ANAC46                                            -------                 --------->YAB1  --------->RAP2.6(3)                                      ---------->DOF2 ----GT1<---------YAB1 <----------DOF2 --------->ANAC58  ----------->GT1                --------->ANAC46 ----->ANAC46    --------->TOE1(3)--------->ANAC58<---------YAB1                      --------->ZAT6- --->ANAC46   <-----------GT1   --------->MYB52(1)<---------ANAC55(2)               <-----------GT1--   caacaacaatttgattaaaccataacttttggccaaacggcaagtcatcattacgagagaagaaaaaacaaaactctcaactcaatttacactaaagatt  19329500           --------->MYB52(1)        --------->ANAC55(2)        <---------ANAC55(2)  ------>ZmHOX2a(1) <---------------AGL15                            <---------AHL20(2) --------------->AGL15                           <---------AHL20(2) ---ARR11(3)                             ---------->DOF2 -->ARR11(3)  ------->GAMYB      --------->AHL20(2)                                 <---------ARR14(2) ---------------->AGL1    --------->GLK1(2)      --------->AHL20(2)                 --------->ARR14(2) -------->ID1--------->MYB46(3)  <---------AHL20(2)              <---------WOX13(1)<------ZmHOX2a(1)   tgtcctaaataagtaacagacaaaacaaattctatataaatctgaaagtttttaaattgctaaatagattgatcactcgtttgaaggatttgagcataca  19329600                                                                *TSS                    <---------ARR14(2)                         --------->ANAC58                    --------->ARR14(2)                         --------->ANAC46                  <---------MYB46(3)                     --------->AHL20(2)                 <---------ANAC58                     --------->YAB1                 <---------ANAC58          ----------->GT1     --------->ANAC58                <---------LBD16        --------->YAB1--------->ICU4                                --             <----------DOF2 --------->HSFB2a(2)     <---------YAB1                               <--          <-----------GT1    <---------HSFB2a(2)   --------->YAB1                    --------->HSFB2a(2)        <-----------GT1  <----------DOF2 <---------YAB1  <---------AHL20(2)   <<<<<<<<<<GT-3b -------   aaacctgttttttcactttgcggttccctttctacaacgtatgatgagtgaaataataataaaacaaggaagtaatctatttttcttctaaaatatgtca  19329700                                                                                                  ---                                                                                                  <--                                                                                                  <--             <---------ARR11(3)                                                                   <--             --------->ARR11(3)                                                                  ----             <---------AHL20(1)                                                           -----------             --------->AHL20(1)                                                          <---------TOE2(3)      ---------->DOF2                                           <-----------GT1       <---------WRKY38(1)  <----------ID1                                             <---------AHL20(1)       <---------WRKY12 -------->DOF2       <---------MYB52(1)                      --------->AHL20(1)     <-----------HVH21 -------ATHB12  --------->GLK1(2)                            <---------ARR11(3)   <---------TOE1(3)-- ----->CBF--------->AHL20(2)          --------->YAB1    ------------>CBF          <---------TOE2(3)--   ataaaggccaaagaaaatattctgttactgtatatttctatcacaagaacataaaaacttcaatattttctgtttaagaaggttaaggtcaaaggttaat  19329800  <---------ANAC58  <---------ANAC58  <---------ANAC46 ------->TEIL --------->SPL7                                                                                   <-- <-------TEIL                                                                                     --- ------>ANAC55(2)                                                                                 --- -------ANAC58                          --------->TOE2(2)                                        <--- -------ANAC58                          --------->AtMYB61         --------->YAB1          --------->GLK1(1) -------ANAC55(2)                       --------->TOE1(2)         <--------ATHB1         <---------ARR14(2) ----------->AtSPL3          <-----------RAV1(1)                 --------->ICU4          --------->ARR14(2) >GT1                    <---------ANAC58 ------>MYB46(1)        <---------ATHB12        <---------GLK1(2) ------->TOE2(2)         <---------ANAC58 ------>MYB83       <---------YAB1             --------->At4g35610 ------->TOE1(2) <---------LBD16  ----------->HVH21        <-----------GT1              <---------At4g35610   acgtacgtggaatagtttctctggattgtttgtgttgtgacacctacgcttgatagagaaattaccaatgattttcttctaatttttctcagattcccaa  19329900                                                      <----------CDC5                                                     <---------At4g35610                                                 <----------DOF2                                                 =========================bZIP_DOF                                              ------>NtERF2                                             <---------DEAR3(1)        ---------->DOF2                                            --------->LBD16     --------->ANAC46                                            <---------LBD16     --------->O2                                            ------>NtERF2       ==================bZIP_DOF                                            <---------At4g35610 ==================bZIP_DOF                                          <---------LBD16       --------->TGA1a                                      --------->ARR14(2)        <---------O2                                      <-----------ARR10         <---------TGA1a                                      <---------ARR14(2)      <---------ALFIN1 ---------------AGL3     --------->AHL20(2)--------->ANAC46 ----------->RAV1(1) ------>TOE2(3)     --------->YAB1  <---------MYB52(1)====================MYC_MYB ------>YAB1<---------TOE2(3)      <---------DEAR3(2)--------->At4g35610                    --------- ------ATHB12      <---------YAB1--------->DDF1<------NtERF2<---------ALFIN1          <----------DOF2   tcttaatatggattatggattatgatataaaatatgtcggtatctccgcggctttcgctgagccacacggggctaaagtgttttttgcctttacacaaaa  19330000                                       <---------PCF2                                      <---------DEAR3(2)                                     <---------DEAR3(1)                                     <---------ZAT18                                    --------->ALFIN1                                  =========================================MYC_MYB                                  --------->O2                                              <------ZmHOX2a(1)                                  <---------O2                                             ----------                                  <---------ZAT2                                        --------->ALFIN1                                  --------->TGA1a                   --------->ANAC58  ===============                                  --------->ZAT2                ----------->GT1       <---------ANAC46                                  <---------TGA1a <-----------HVH21 --------->ANAC58  <---------TGA1a              <-----------GT1   <-----------RAV1(2)      --------->MYB52(1)         --------->ZAT14       --------->CCA1(2)     <---------At4g35610<---------MYB46(3)==============================MYC_MYB <---------REM1(1)           <---------ZAT2    --------->ETT(1)<---------MYB46(3)   <---------ZAT14 <---------ANAC46            --------->At4g35610<---------DEAR3(2)<--------P   <---------ZAT14 >ANAC46<-------TEIL         --------->ZAT2  <-----------HVH21<---------ANAC46 --------->ZAT14 ------   ctggtgtagatacaaattacagaacatattcagctcaggtgggctcgggtcgggtcatataacgacgggtaagaaaacgactgaagtgaagtgaggataa  19330100                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                               ------                               ----------->GT1                                                 ------           <-----------GT1    <---------TOE2(3)                <---------ANAC46                ------          <<<<<<<<<MYB98    ---------->DOF2                    <---------ANAC58              <-------  <---------TOE2(3)  <---------ANAC46                          <---------ANAC58       --------->HSFB2a(2) ->GT1  <---------YAB1 ----------->GT1                     <------------CBF<---------ZAT18<---------GLK1(1) ===========================bZIP_DOF             <-----------GT1<----------DOF2       <---------HSFB2a(2) --->AHL20(2)    <----------DOF2   <-----------TBP    <----------DOF2 <----------DOF2<---------LBD16<   aatggaggttatgttactcctttgagggtataaaggtaaatatagagttttttaccctttgaattgcttttactttgggcagtctcttctggatttcacg  19330200  Previous    Next  AGI:  At5g47650.1    Description:  ATNUDT2 (Arabidopsis thaliana Nudix hydrolase homolog 2); ADP-ribose diphosphatase/ NAD binding / hydrolase. Identical to Nudix hydrolase 2 (NUDT2) [Arabidopsis Thaliana] (GB:Q94B74;GB:Q9FGJ2); similar to ATNUDT10 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 10), catalytic [Arabidopsis thaliana] (TAIR:AT4G25434.1); similar to hydrolase, NUDIX family protein [Brassica oleracea] (GB:ABD64992.1); contains InterPro domain Anti-sense to fibroblast growth factor protein GFG (InterPro:IPR003293); contains InterPro domain NUDIX hydrolase, core; (InterPro:IPR000086); contains InterPro domain NUDIX; (InterPro:IPR015797) Range:  from: 19327418    to: 19329664    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version