Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->ANAC46                                  --------->DEAR3(1)                               --------->AtMYB61                               <---------ALFIN1                               ----------->RAV1(1)                              --------->ANAC46                              --------->MYB46(3)                             ----------->RAV1(1) <---------DEAR3(1)          ------>NtERF2                  <---------ARR14(2) <---------MYB46(3)         --------->ANAC46                --------->ARR14(2) ----MYB83               --------->ANAC46              -------->P ----MYB46(1)           ------->TEIL                ------>ZmHOX2a(2) ------AtMYB61         <-----------GT1--------->AtMYB61------>MYB83--------->ANAC58 -----WOX13(1)       <---------MYB52(2) <---------ALFIN1 ------->GAMYB                    ----------- -->ATHB12           <---------ATHB12 <---------ALFIN1 ------>MYB46(1)  --------->ZAT6  ----------->GT1 --YAB1     <---------YAB1  <---------ALFIN1    <---------YAB1     --------->ANAC58---------->DOF2 <-   tggtcgatgcagttttgatggcaatgaaccccaccacagaccacaccctcatgatccaacccaattcgctcgtaacacaaaaaaaaaaagaagtgaaaaa  19326100                       --------->ARR14(2)                       <---------ARR14(2)                      --------->At4g35610                      <---------At4g35610                               --------->ANAC46                     <---------MYB46(3)                                 --------->ANAC58               <---------ANAC58                    <---------ARR14(2)   --------->ANAC58               <---------ANAC46                    ------>MYB46(1)     ------->MYC3            <---------MYB52(1)                     ------>MYB83        <-------MYC2           <-------GAMYB                           --------->ARR14(2)  ------->MYC2          --------->MYB52(2)                      <---------CCA1(2)    <-------PIF5          <---------MYB46(3)                     <---------MYB111(2)   ------->PIF5      <---------HSFC1(2)                      <---------ALFIN1         <-------MYC3      --------->HSFB2a(1)                  ------->GAMYB              --------->ANAC58      --------->HSFC1(2)                  --------->ANAC58            --------->ANAC58    --------->MYB52(1)<-------GAMYB       --------->ANAC58  --------->LBD16 -------->ZAP1 <---------ANAC58         --------->MYB52(1) <---------ANAC46 >GT1 <---------HSFB2a(1)<---------At5g28300 --------->DEAR3(1)       --------->ANAC46    <---------ANAC46 --------WRKY18(1)------------>AtMYB77  ---------->DOF2   <---------LBD16      <----------DOF2    <--   ttgaccgaagggtcgttgagtggcagttaccctctgtctccctaacgcccacctatcttctccgtgttttccacgcgctatctttctctcttctgtgtgt  19326200                                                                   ------->MYC2                                                                   -------->ABF1                                                                   <-------MYC4                                                                   ------->MYC4                                                                   ------->PIF5                                                                   <-------PIF5                                                                   <-------MYC3                                                       ------->GAMYB                                               --------->ZAT18     ------->MYC3                                               <---------ZAT18     <-------MYC2                                              --------->TCP16(2)  --------->O2                                             --------->PCF2       --------->ANAC55(2)                                             <---------TCP16(1)   =================bZIP_DOF                                             <---------TCP11(2)   =================bZIP_DOF                                             <---------PCF5       <---------O2                            ----------->HVH21<---------ARR14(2)   --------->TGA1a                          ==================bZIP_DOF--------->MYB52(1)                          =========================================MYC_MYB                          =====================================MYC_MYB                          ----------->GT1    --------->ARR14(2)   <---------ANAC55(2)                          <---------TGA1a    <---------TCP20      --------->ANAC46                       <------NtERF2       ------>NtERF2          <---------TGA1a                      ------>NtERF2        --------->LBD16      <---------ALFIN1                      <---------DEAR3(2)  <---------ANAC58   --------->ANAC46                     <---------DEAR3(1)   <---------ANAC58 --------->ANAC46                    <------NtERF2         <---------ANAC46<---------ZAT18       ---------->DOF2                <---------ANAC58 ---------->DOF2  <---------MYB52(2)    ---------->DOF2         ------>ZmHOX2a(1)--------->TGA1a<---------LBD16  <---------ETT(2)   --------->TOE1(3)   --------->ANAC58 --------->ATERF1(1)--------->ALFIN1=====================MYC_MYB   --------->ANAC46<-----------HVH21 --------->ALFIN1 <------------AtMYB77   --------->TOE2(3)   --------->ANAC58<---------ATERF1(1)--------->ZAT18 ======================MYC_MYB ---------GT1   <---------ANAC58 ===========================================bZIP_DOF       <---------CCA1(2)   ttaccacgctcctcttatgcgcgtcggctcgtgacaaaagtgtgccgggtccactaactgtccacaacacgtggcaaagccttaaagggctgtctatctc  19326300                                                                                              -------                                                                                           <---------ANAC55(2)                                                                                           <---------O2                                                                                           <---------TGA1a                                                                                           --------->TGA1a                                                                                           ==========                                                                                     ------->MYC3                                                                                     <-------MYC2                                                                                     <-------MYC3                                                                                    <---------ANAC55(2)                                                                                    <---------ANAC58                                                                                    <---------bZIP60(2)                                                                                    <---------TGA1a                                                                    ----------->GT1 <---------ANAC46                                   --------->ARR14(2)           <---------SPL7      <---------O2<----                                   <---------ARR14(2)        <---------DOF5.7(2)    --------->O2-----                                --------->ANAC58             --------->MYB52(1)     --------->ANAC55(2)                                <---------ANAC55(2)         --------->ZAT14         =================                                --------->ANAC58            <---------ZAT14      <------ZmHOX2a(2)                                --------->ANAC55(2)         <---------WRKY12    --------->ARR11(3)                   ----------->HVH21             --------->GLK1(2)  <---------MYB46(3)     --------->O2                <---------ARR14(2) ------->TEIL  <---------ARR11(3) <---------DEAR3(2) <-----------HVH21                --------->ARR14(2)<---------CCA1(2)     --------->ZAT6          <---------ARR11(3)       <------ZmHOX2a(2)        --------->ANAC55(1)    <---------YAB1  <-------TEIL <---------ANAC58      --------->ARR11(3)  <---------ETT(2)       <-----------ARR10 <---------DEAR3(1)------->MYC2      <---------ARR11(3) --------->WRKY18(1)    <---------GLK1(2)--------->MYB52(1) --------->TGA1a   tcaaacaagatcaattccaatccgacggtcgagcacgtatccagttgtcagaatcttatcagtaaacggacggttcatataagatcacgtgtcaagtgag  19326400                                                                 <---------RAP2.6(3)                                                                 ------>NtERF2                                                                ------->GAMYB                                                                --------->At1g77200                                                                <---------ETT(1)                                                                --------->DREB2C(2)                                                                --------->DEAR3(1)                                                                --------->RAP2.3(3)                                                                --------->ANAC46                                                                --------->RAP2.6(2)                                                                ----------->HVH21                   --------->AHL20(2)                          --------->MYB46(3)             ------>ZmHOX2a(1)     --------->ATERF1(1)         --------->DEAR3(2)        <---------ANAC58          <---------ATERF1(1)         <---------At4g35610        <---------ANAC58       ------>NtERF2         ------------>CBF   <-----------GT1       --------->SPL7          <---------ATERF1(1)   *TSS     --------->At4g35610    <---------ANAC58           --------->LBD16     <---------ZAT18   <---------ANAC55(2)    <---------ANAC58          <---------DEAR3(1)   --------->REM1(2) --------->ANAC55(1)   <---------------AtSPL3    <---------LBD16--------->MYB46(3)------>MYB46(1) -->ZAT18<---------PCF2   --------->At4g35610<---------ALFIN1 ------>MYB83 ===========================bZIP_DOF      --------->REM1(1)   --------->ZAT2                  <------ -----At4g35610    <-----------TBP------>NtERF2    --------->ZAT14   --------->ANAC55(2)  <----------DOF2 ---->At4g35610  <----------DOF2 --------->DEAR3(1)<---------ZAT14 <---------ALFIN1----------->RAV1(2) ===========================bZIP_DOF    ------>ZmHOX2a(1)   --------->MYB46(3)   <---------ALFIN1   cagaagtcgtgcgtcctctctttatataagctccggcgactccttcaccactgtgtacaataccagccgacacttaacaattcacacctgctctttttac  19326500                                                ------->GAMYB                                                --------->AtMYB61                                               --------->MYB46(3)                                               <---------MYB55(2)                                             --------->WOX13(1)                                            <---------WRKY12                                           --------->WRKY18(1)                   <-----------GT1       --------->ANAC58                            --------->ATHB12                 <-----------GT1      <---------ATHB12                              --------->ICU4         --------->TOE2(3)           --------->ANAC46                   -------->ATHB1   --------->HSFB2a(2)               --------->ANAC58                   --------->ATHB12          ---   <---------HSFB2a(2)   --------->ZAT14 --------->ANAC58               <---------ICU4        ------- -----GT1--------->TOE1(3)           --------->ANAC58                  <---------ATHB12  ----------->GT1   tctttctaaaaccctaaattttctcgcttcagtcttcccactcaagtcaaccaccaattgaattcgatttcgaatcattgatggaaatgatttgaaaaaa  19326600                                                          <---------LBD16                                                        --------->GLK1(2)                                                        --------->ARR14(2)                                                        <---------ARR14(2)                                                       --------->GLK1(1)                                               <---------ETT(1)                           --------->ICU4      ----------->HVH21                    <---------ANAC46        --------->GLK1(2)      ----------->GT1     --------->MYB52(1)           <---------AHL20(2)              --------->ARR14(2)    <---------ANAC46   --------->YAB1   ----------->GT1  <---------ANAC58       <---------ARR14(2)  <---------MYB46(3) -------->P ---------->DOF2    <---------ANAC58       <---------GLK1(1)  --------->ALFIN1  --------->MYB46(3) -------->GT1 <---------AHL20(2)           --------->GLK1(1)--------->LBD16    <---------KAN4(2) --->DOF2  --------->AHL20(2)        --------->ALFIN1  <---------GLK1(1)--------->MYB52(1)         --   gagtaaagtttatttttttattccttgtaattttcagaaatgggggattccgacagggattccggtggagggcaaaacgggaacaaccagaacggacagt  19326700                                                   --------->LBD16                      ------>ZmHOX2a(2)                                                  --------->RAP2.6(2)                   =============                                                 <---------LBD16                      <---------ARR11(3)                                                <---------ZAT2                        <---------ARR14(2)                                                <---------At4g35610                   --------->ARR14(2)                                                --------->At4g35610                   --------->ARR11(3)                                              <-----------RAV1(2)                     <---------AGP1                                           <---------TGA1a                      ------->GAMYB                                           <---------bZIP60(1)                 --------->ANAC58                                           --------->bZIP60(1)                 --------->ANAC58                                           --------->TGA1a                     --------->ANAC46                                           --------->O2--------->YAB1        ------>NtERF2                                         --------->MYB52(1)                  <---------ATERF1(1)                                         <---------DOF5.7(2)                --------->DEAR3(1)                                     ------>ZmHOX2a(2)<------ZmHOX2a(2)   <------NtERF2==============                            <---------ANAC58 --------->TGA2(2)            ------>NtERF2--------->GLK1(1)                            <---------ANAC58<-----------TGA1             --------->ANAC46                           <-------TEIL--------->DOF5.7(2)               --------->ANAC58                          <---------ARR14(2)--------->TOE2(3)      <---------ANAC58   <---------ARR14(3)                          --------->ARR14(2)<-----------HVH21      <---------ANAC58   --------->ARR14(3)     ---------->ARF1     <---------GLK1(2) =============================================MYC_MYB     ---------->ID1--------->ANAC58 <------ZmHOX2a(2)--------->ARR14(2)  --------->ANAC58   --------- ---->ZmHOX2a(1)   --------->ANAC58<---------ARR14(2)<---------ARR14(2) <---------LBD16<------ZmHOX2a(2)   cctccttgtctccaagagagcaagacaggttcttgccgatcgctaacgtcagccggatcatgaagaaggccttgcccgccaacgccaagatctctaaaga  19326800                                                          <---------At4g35610                                                       <---------HSFC1(2)                                                       --------->HSFC1(2)                                                 --------->LBD16                                               <---------At4g35610                                               --------->At4g35610                                           <-----------TGA1         <-----------HVH21            ----                                         <-------TEIL --------->ANAC58      <------ZmHOX2a(1) -------                   --------->ALFIN1   --------->ZAT2<xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <-------      --------->CCA1(2)     --------->LBD16<-----------HVH21     --------->ANAC55(2)         <------- ---------->DOF2<------ZmHOX2a(1)     --------->At4g35610 --------->At4g35610       ===============HOX2a_HOX2a ======================HOX2a_HOX2a    <---------At4g35610--------->GLK1(2)  =======================HOX2a_HOX2a ======================HOX2a_HOX2a <---------At4g35610--------->ANAC58<-----------RAV1(2)   <------ZmHOX2a(2) ->DOF2      <-----------RAV1(2)<-------TEIL   <---------LBD16   <---------ANAC55(2)<------ZmHOX2a(1)   tgccaaagagacgatgcaggagtgtgtctccgagttcatcagcttcgtcaccggagaagcatctgataagtgtcagaaggagaagaggaagacgatcaac  19326900                                                                                                  <--    --------->ARR14(2)                                                                           <---    <---------ARR14(2)                                                                           ----  ----------->ARR10                                                                            <----- --->GAMYB                                                                                     ------ -->MYB52(1)            <---------ZAT14     <---------YAB1                           ================ --WRKY38(1)        --------->ZAT6     <------ZmHOX2a(1)         <---------ANAC58    <------ZmHOX2a(2) --WRKY12          <---------YAB1    <---------TOE2(3)           <---------ANAC58  --------->GLK1(1)   ggagacgatttgctctgggctatgactactctaggttttgaggattatgttgagccattgaaagtttacttgcagaggtttagggagatcgaaggggaga  19327000  Previous    Next  AGI:  At5g47640.1    Description:  CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family (Hap3b). Identical to Nuclear transcription factor Y subunit B-2 (NFYB2) [Arabidopsis Thaliana] (GB:Q9FGJ3;GB:O23634;GB:Q9FV58); similar to CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family [Arabidopsis thaliana] (TAIR:AT4G14540.1); similar to transcription factor Hap3b, putative [Brassica oleracea] (GB:ABD64993.1); contains InterPro domain Transcription factor, NFYB/HAP3, conserved site; (InterPro:IPR003956); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); contains InterPro domain Trans Range:  from: 19326453    to: 19327498    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version