Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       ----------->HVH21                                                                    <-----------HVH21                                                                   ----------->GT1                                                                   <---------ANAC58                                                                   <---------ANAC58                                                               ---------->DOF2                                                             --------->AHL20(2)                                                             <---------AHL20(2)                 <----                                                         --------->AHL20(2)                 ---------                                                         --------->AHL20(1)              ------->MYC3                                                         <---------AHL20(1)              <-------MYC3          --------->LBD16                                <---------AHL20(2)     --------->TOE2(3)  --------->TOE2(3)         <------ZmHOX2a(2)        --------->AHL20(1)         --------->TOE1(3) -------GT1                --------->ARR14(2)        <---------AHL20(2) <---------bZIP60(1)------->MYC3 ---WOX13(1)               <---------ARR14(2)        --------->AHL20(2) --------->bZIP60(1)<-------MYC3   acaacattaatccagagtttaaaaattcggatcatctaattcatacataagtgaattaattaattaaaagcgtgacatcaaacgttagacacatgtggag  19323000                               <---------YAB1                             ========================================================================                             <---------ICU4                             <---------------AGL15                             --------------->AGL15                            --------->MYB46(3)                            ----------------->AG                            ----------------->AGL1                            <-----------------AG                     --------->MYB46(3)                <---------ARR11(3)              ------->TEIL  ----------------->AGL2           --------->ICU4   <-----------------AGL2           <---------YAB1   <-----------------AGL3             ------>MYB46(1)         --------->YAB1     ----------------->AGL3             ------>MYB83          <---------TOE2(3)         <---------ICU4    -------->P                      ------->TEIL     <-----------GT1 --------- -----At4g35610 --------->ARR11(3)             <---------REM1(1)       <----------DOF2    <---------- >ALFIN1--------->ICU4  <---------MYB52(2)   <---------ANAC46<---------MYB111(1)   <---------AHL20(2)   atgagattgaataatgaatatcatccactaaccattataggttagagtcttgtagcctatgtaccaactatctcttttatactatttaagtttaactctc  19323100                                     ----------->GT1                               --------->ICU4                                     --------->LBD16                               <---------YAB1                                    <---------LBD16                   --------->YAB1--------->AHL20(2)                              --------------->AGL15              <---------ZAT14 <---------ICU4                              <---------------AGL15              <---------ZAT18 <--------HAHB4                             ----------------->AGL1              --------->ZAT14 --------->ATHB51                    <---------At4g35610                      <---------ICU4      --------->YAB1                    --------->At4g35610           <---------TOE1(2)  <---------ATHB12                 ---------->DOF2   <---------LBD16<---------TOE2(2)XXXXXXXXXXXXXXXXXXXXX>MIR2935     --------->ANAC58        <-----------------AGL2         <---------YAB1      <---------YAB1 ==============================================MADS_MADS  --------->YAB1        --------->ICU4 >ZAT6  --------->GLK1(2)    ----------------->AG <---------TOE2(3)--------->WOX13(1) <---------YAB1 -GT1--------->ANAC58        <-----------------AGL1      <---------YAB1 <---------O2--------->YAB1   atcttgcaagaatccaagattaagcagccttactaaatcggggaaataaacttaggtttataatcagtgcaatcacatggccataattataaatgagcaa  19323200                                                                        <---------AHL20(2)                                                               ------>NtERF2                                                               --------->LBD16                                                              --------->RRTF1(2)                                                              --------->RAP2.6(2)                                                              <---------ANAC46                                                              ----------->RAV1(1)                                                              --------->RAP2.3(3)                                                              --------->DEAR3(1)                                                              --------->RAP2.3(2)                                                             <------NtERF2  --------->TOE1(3)                                                             --------->ORA47(2)                                                             --------->RRTF1(1)                                                             --------->DEAR4(2)                                                             --------->RAP2.3(1)         <---------ICU4                                                             --------->ATERF1(1)         --------->YAB1                                                            <---------RAP2.3(1)         <---------ATHB51                                                           --------->DEAR3(1)  ---------->DOF2                    <---------AHL20(2)             <----------ID1   <---------AHL20(2)  <---------ATHB12                   --------->AHL20(2)            ---------->DOF2  <---------CCA1(2) ------------>CBF            --------->DAG2               <---------YAB1   <---------ABI4(2) --------->TOE2(3)      --          ---------->DOF2<-----------RAV1(1) --------->AHL20(2)<------NtERF2--------->YAB1<---------TOE2(3)   aacaattgtctgaaaaggccataaaatttgttgggcctacaatttgattaaaaaagacgaagcgccgcatatattttatcttaaagcccaataatgtttt  19323300                 --------->ZAT14       <------MYB46(1)                                                   --------->TOE1(2)       <------MYB83                          <------------CBF   <------ZmHOX2a(1)              ------      --------->MYB111(1)                   --------->YAB1   <---------At4g35610              -------     <--------P  <---------ZAT14            --------->ATHB12 --------->At4g35610      ------>ZmHOX2a(1)     <---------MYB55(1)           <----------DOF2        <-----------HVH21        <---------ARR14(2)  <-----------RAV1(2)   ------>ZmHOX2a(1)   <---------ICU4 <-----------RAV1(2)    --------->ARR14(2) ---->NtERF2   --------------->AtSPL8      <---------YAB1<----------DOF2 *TSS     --------->GLK1(2)   cggcccagtaggtgttctctgtactcctattctctgctataacttatcattgtctcccgcttcagaggaatcagacctaagaagaatcctcactcgtaaa  19323400                                               --------->AHL20(2)                                               <---------AHL20(2)                  --------->ARR11(3)          --------->AHL20(2)                  <---------ARR11(3)     <------MYB83          <---------ANAC46               ----------->GT1     --------->ALFIN1                    <------MYB46(1)    <---------ARR14(2)                 <--------P               <---------TOE2(3)  <---------TOE2(2)                   <-------GAMYB            ---------->DOF2  <---------TOE1(2)                  <---------MYB46(3) --------->LBD16 <-----------RAV1(2)                 --------->MYB55(2)<---------ANAC58 --->DAG2 <---------ANAC58          <---------TOE2(3)  <---------ANAC46             ------>ZmHOX2a(1) --->DOF2 <---------ANAC58        <-----------RAV1(1)  <---------ANAC58    <---------AHL20(2)   gtcgcaggtatggcttcgaagagctctcgatctattttgtggttggaaattaatagtccgtgtattaaagtttcaatttttatgtccttgaatttgattt  19323500                                                                                               <-----                                                                                             --------                                                             --------->At4g35610            <--------                                             <---------TOE2(3)                        --------->ZAT14                                             <---------TOE1(3)                        <---------ZAT14                                       --------->ICU4 <----------DOF2                 <---------ZAT18                                      <XXXXXXXXXXXXXXXXXXXXMIR782       --------->ATHB12  <----------DOF2                                      <---------KAN4(2)   ---------->DOF2             --------->ZAT18   cttccatatcagtgtcgaaacattaggcatcaccagagggaatatttaaggtttttctttaaaagctgaagacttgattagaaattagtccactttgatt  19323600                                                                                --------->TGA1a                                                                                --------->O2                                                 <---------ALFIN1               <---------O2                  --------->At4g35610          ----------->RAV1(1)             ------>MYB46(1)    <-------TEIL  <---------At4g35610       ------>ZmHOX2a(1)                  ------>MYB83 ----WOX13(1)   <-----------RAV1(2)<---------At4g35610                        <---------ALFIN1 ->ATHB12  --------->MYB52(2)      --------->At4g35610                     --------->PCF2 -YAB1 <---------YAB1<-------TEIL<------ZmHOX2a(1)                    <-----------HVH21   gaaatgttcatgtttgtttcagatgcattgcattaggagctcaatcctgcaacacttgagactgagagtctctgtcagacccacttcgcttcttcagaac  19323700                                                       <xxxxxxxxxxxxxxxxsmallRNA(i)                                                   <---------At4g35610                                             --------->At4g35610                                             <---------ZAT2                 <---------ZAT2                                       --------->At4g35610       <------ZmHOX2a(2)                                  --------->ANAC46 --------->At4g35610      <---------At4g35610                                <-----------GT1  <-----------RAV1(2)        --------->ZAT2                          --------->AHL20(2) --------->ZAT2     --------->ARR11(3)   ----------->GT1        <---------AHL20(2) <---------At4g35610<---------ARR11(3)                  -   gagaatggtttcaagagtattggtatttttaatttcacatcagaagcagctgcagatggaggccaagatcaaatattgagcagggttattgaactggtga  19323800                <---------ALFIN1               ------>MYB83               -------->P               ------>MYB46(1)             --------->AtMYB61                             <---------ANAC46            --------->MYB46(3)                         <----------DOF2                             --    --------->ANAC58                             <---------DAG2                                    <-    --------->ANAC58                             <----------DOF2                            ---------    <----------ID1                          --------->At4g35610     <----------DOF2    <---------MYB46(3)    --------->ANAC46    <---------TOE1(3)   <---------At4g35610    <---------DAG2     <--------P  <-- -------->CCA1(2)       <---------TOE2(3)  <-----------RAV1(1)  <-----------GT1     <---------MYB46(3)   agaaatacgacaaaaccaacacctctgaggttagggattacaaaactgctgctttttctttgtgtataaccttttattttggtgaatggttgttttgtaa  19323900  Previous    Next  AGI:  At5g47630.1    Description:  MTACP3 (MITOCHONDRIAL ACYL CARRIER PROTEIN 3); acyl carrier. similar to mtACP-1 (MITOCHONDRIAL ACYL CARRIER PROTEIN 1), acyl carrier [Arabidopsis thaliana] (TAIR:AT2G44620.1); similar to acyl carrier protein, putative [Brassica oleracea] (GB:ABD64990.1); contains InterPro domain Acyl carrier protein-like (InterPro:IPR009081); contains InterPro domain Acyl carrier protein (ACP); (InterPro:IPR003231); contains InterPro domain Phosphopantetheine-binding; (InterPro:IPR006163) Range:  from: 19323373    to: 19324320    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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