Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       ------>ZmHOX2a(2)                    <------ZmHOX2a(2)                   --------->ARR14(2)                   <---------ARR11(3)                                               --------->ANAC58                   <---------ARR14(2)                                               --------->ANAC58                   --------->ARR11(3)            <---------MYB52(1)          --------->O2             ----------->RAV1(2)         <---------ZAT18                     <---------O2             <---------ANAC58            --------->ZAT14                     --------->bZIP60(1)             <---------ANAC58            --------->ZAT18                     <---------bZIP60(1)             <---------ANAC46            <---------ZAT14                     <---------bZIP60(2)        <---------ARR14(2)            --------->LBD16                     ----------->HVH21 --------AGL15 --------->LBD16      ------>ZmHOX2a(2)                   <---------ANAC58            - ---------AGL3<---------LBD16  --------->At5g28300                      <---------ANAC58 <-----------RAV1(2) >HVH21 --------->ARR14(2)   <---------DEAR3(1) <-------GAMYB  <----------DOF2   <---------SPL7------   aatggaagcgtttttgcctgggatcttagggacggtgatccagagcactccgttgataagcttcactttagttttcttgacgtcgtaagcctcagggttg  19317300                                                                                               <-----                                                                                               <-----                          --------->LBD16                                                    <-------                         <---------DEAR3(1)                                                  <-------                        --------->SPL7                                               --------->ETT(2)                        <---------LBD16                                              <---------ETT(2)                      <-----------HVH21                     <------NtERF2            ----------->HVH21                      <---------SPL7                       <---------DEAR3(2)        --------->DEAR3(1)                     <---------RAP2.6(2)                   ------>NtERF2             --------->WRKY38(1)                     <---------ANAC58                     <---------At1g77200       --------->ATERF1(1)                <---------ARR14(2)                        <---------DEAR3(1)        <------NtERF2                --------->ARR14(2)<---------ANAC58     --------->MYB52(2)         <---------ANAC58              --------->LBD16     <---------ANAC58    <-------TEIL                <---------ANAC58  <         --------->ATERF1(1)   <---------ARR14(2)  <---------MYB46(3)             <---------ANAC46 --        <---------ATERF1(1)  <----------DOF2     <---------ANAC58                <------NtERF2------- -------->ARR11(3)   <---------ANAC58            <---------ANAC46           <---------MYB46(3)------- ----->GT1--------->DEAR3(1)<---------ANAC46     <---------ANAC58    --------->ALFIN1--------->WRKY12   aaaatcatggagcctccgtatttgcgtccggcgttttcgtactcaggcattgctggttcgtcggcgaagaagtggacgttgttggcgtcgacccagtagg  19317400         <---------LBD16               --------->AtLEC2    ----------->HVH21                  --------->ANAC58  --------->CCA1(2)                    --------->ANAC58  <------ZmHOX2a(2)                    --------->ANAC55(2)  <---------At4g35610                  <---------ANAC55(2)  --------->At4g35610                  --------->ANAC46 --------->ARR11(3)                    --------->ANAC55(1) --------->ARR14(2)                 <---------REM1(2) <---------ARR14(2)                <-----------HVH21 <---------ARR11(3)                <-----------TGA1 <---------AGP1                   --------->ANAC46 --------->AGP1                   --------->bZIP60(1) -MYB46(1)                        <---------TGA1a -MYB83 <---------LBD16           --------->O2                                 ---------->ARF1 --MYB55(1)                       <---------O2<---------GLK1(1)       <---------ALFIN1 -P------>ZmHOX2a(2)              --------->TGA1a                    <---------ZAT14 ---------GLK1(1)          --------->ETT(2)   --------->GLK1(1)      --------->SPL7    <----------DOF2 --------->ARR10           <---------ETT(2)  --------->ARR11(3)   --------->TOE1(1)    <---------DAG2 -->MYB46(2)    ============================MYC_MYB        <-----------HVH21  <---------WRKY18(1) -->MYB111(1)   -------->P--------->DDF1     <---------ARR11(3)   --------->TOE2(1) <---------ALFIN1   tgagatctgactcgggacaaccaggcatgtcgactctcgtcacgcaagatttcttcgtctctgtcacctcgtacaccgcttgactcccacttttctgaaa  19317500                                                                =======================bZIP_DOF                                                                <---------ANAC58                                                                <---------TGA1a                                                                <---------bZIP60(2)                                                                <---------ANAC58                                                                <---------ANAC46                <-------TEIL                                    --------->O2        --------------->AtSPL8                    ---------->DOF2  --------->REM1(2)     ------>ZmHOX2a(1)                            ========================bZIP_DOF    <---------ANAC58                          <---------YAB1    <---------ANAC55(1)      <---------YAB1    <---------ANAC58                       <---------MYB52(1)   <---------O2            --------->AHL20(2) <---------ARR14(2)                      ----------->GT1     ----------->HVH21<---------TOE2(3) --------->ARR14(2)                     <-------TEIL       --------->CCA1(2)---------->DOF2        --   tcggttccttactgtacatacataagataaaacaaacacaaattcgttattagaaagagagatttgacgtgtaaactataaaggtttgatttttataaga  19317600                                              <---------At4g35610                                              --------->GLK1(1)                                              --------->At4g35610                                             <---------ARR14(2)                                             --------->ARR14(2)                                            <XXXXXXXXXXXXXXXXXXXXXXXMIR404                                            <------NtERF2                               --------->ANAC58                               --------->ANAC58         <---------MYB52(1)                               <---------ANAC55(2)<---------ANAC58                               --------->ANAC55(2)<---------ANAC58                       <---------ANAC58    --------->LBD16       ---------->DOF2 <---------ANAC58   --------->ANAC46<---------DOF5.7(2)    --------->At5g28300<---------ANAC46  <---------LBD16--------->DOF5.7(2) --------->HVH21   <----------DOF2<---------GLK1(2)    <----------DOF2  ------>ZmHOX2a(1)        <---   aatgacagtgaaagatgaaaactttacttggagacggaatttcgccggaactgcctgcgttaacttccatgttcctactcatttgctcaaaacgatgctc  19317700                                                      <-----------TBP                                                    --------------->AGL15                                                    <---------------AGL15          --------->HSFB2a(2)                      <-----------------AGL2                         ---          <---------HSFB2a(2)                      ----------------->AGL3      --------->ALFIN1  ----       <----------DOF2                      <---------ZAT18              <---------ZAT14       <-----   <----------DOF2        --------->ZAT18 --------->ANAC46           <------ZmHOX2a(1)         <----- -------DOF2             *TSS ---------->DOF2<---------ALFIN1     <------ZmHOX2a(1)  ---------->DOF2   tttctctttcttttggaaggaaactgagtgagcaaagtcgctctactccacttgctatttatagccgaggaggactatagggtttgggaaaggcctggag  19317800     --------->YAB1     --------->ATHB12    <---------ATHB12    <---------YAB1   ------>MYB83   ------>MYB46(1)                                                               <---------ARR11(3) ------>ZAT18                                                 <------MYB46(1)    --------->ARR11(3) ------->HVH21                    ----------->GT1             ----------->GT1 --------->DAG2 ----ANAC58                      <---------ZAT6               <------MYB83   ---------->DOF2 ----ANAC58---------->ID1        ----------->GT1        <---------YAB1    ------>ZmHOX2a(2)         -   tgacctatcatttggcccattaatcggcccaaggagtgttaaaaattcgaaattgtttctgatttggtgaaattgatcgaaaagctcttctagttgaact  19317900                                                                                              <------                                                                                              <------                                                                                              <------                             >>>>>>>>>>>>WRKY18                                           --------->MYB46(3)              ------>ZmHOX2a(2)                                                        ----------->HVH21            <---------ARR11(3)                                                     --------->LBD16            --------->ARR11(3)                                                    ------->GAMYB -----   ---------->DOF2     --------->ALFIN1            <----------DOF2               <---------LBD16----- -------->AtLEC2     <---------ANAC46   --------->WOX13(1)<---------ZAT14       --------->MYB52(1)   ccatggaaaggagtgatcttgtagagtgttgacaattgacatcaatctggagactttgacttctctgaacaatttttagcacaaccggagtgaccaccta  19318000                                           --------->YAB1                                          --                                 <------NtERF2                                                    ---           <---------ARR14(2)   <---------LBD16                                                   <-- ---MYB111(1)                  <---------LBD16                                                 <----- ---MYB59  --------->ARR14(2)  --------->ETT(1)                                         --------->At4g35610 ---MYB46(2)                   <---------ANAC46                                         <---------At4g35610 ->MYB46(1)--------->GLK1(2) <-----------HVH21                                          --------->ZAT2 ->MYB83  <---------GLK1(2) <-----------RAV1(1)                                     <---------ARR11(3)   atatgggcctaagaatcggcccatttagttttgtcgggggatgaattataaacaattgacatttgatggaagaaactaatattcaatatcagcttagctt  19318100                                                                                            <--------                                                                                            <--------                                                                                           <---------MYB46(3)                                                                                       --------->ATHB12                                                                                       -------->ATHB1 --------->GT1    <---------MYB59                 ---------->DOF2                      <---------ICU4 ------>MYB59    --------->ANAC58          <------ZmHOX2a(1)                          <---------ATHB12 -------TOE2(3)  --------->ANAC58         ----------->GT1        ----------->GT1     ------->TEIL -----DOF2      ------->TEIL         <----------DOF2  ----------->GT1        ----------->HVH21   taggtaaattatgcaatggacccaatttgtttcaatcggcttagaggaaaaaaaaagagttaaaagtttgtgaaaacaaatgacatgaatcattgggtac  19318200  Previous    Next  AGI:  At5g47600.1    Description:  heat shock protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12180.1); similar to hypothetical protein 25.t00004 [Brassica oleracea] (GB:ABD64967.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068) Range:  from: 19317008    to: 19317725    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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