Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         -------->ATHB1                                       <---------ICU4                                       <--------ATHB1                                       --------->ATHB51                                           ---                                       --------->YAB1                                             ---                                      --------->ICU4                                     --------->AHL20(2) <---------ARR14(2)                   <---------ATHB51                                   <---------AHL20(2) -->GLK1(1)                           <---------ATHB12                                   <---------YAB1 -->CCA1(2)                           <---------YAB1    <-----------GT1                 --------->YAB1 --GLK1(2)               --------->AHL20(2)     <---------TOE2(2)          <---------TOE2(3)  ------- --ARR14(2)           <---------ANAC55(2)       <---------TOE1(2)        <---------AHL20(2)--------->YAB1 ->ARR14(2)          <-------TEIL--------->ANAC46<---------YAB1  <----------DOF2        --------->TOE2(3)   gcatattttgaaaactatagaaatacataaaatagacacaataattgtcttatgtttatttcaactcctttgtttttaatgtttctgcaatattaataaa  19303800                                   --------->ATHB12                                   -------->ATHB1                                   --------->ATHB51                                  <---------YAB1                                <---------------AGL15        ----------->GT1         --------------->AGL15      --------->ANAC55(2)      <-----------------AGL3      <---------ANAC55(1)      <-----------------AGL2      <---------ANAC55(2)      <-----------------AGL1                                ---------->ID1   <---------ARR14(2)          ------------>ATHB5                                <---------ANAC58  --------->At5g28300          ----------------->AGL3                            <---------ANAC58  <-----------HVH21            ----------------->AGL1                         --------->ANAC58 ----------->GT1 --------->TOE1(3)--------->ICU4                             <---------LBD16 <---------MYB46(3)        --------->DEAR3(2)                               <---------ALFIN1<-------- --------->AtMYB77  ---------->DOF2<---------ICU4                           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --------->MYB.PH3(1) <---------TOE2(3)                      <---------GLK1(1)--------->ANAC46 --->DOF2    ---------->DOF2   ----------------->AGL2        --------->GLK1(1)--------->ANAC58   gagcggttacatgttaaaagcttaaaggaagcgaccattattggcaggctcgaaggaagtgagatttctgaatttcatccacggcttgtcccatacgatt  19303900                                      <---------ALFIN1                                      --------->DEAR3(1)                                    <---------ATERF1(1)                                    ------>NtERF2                                   >>>>>>>>>AtERF-4                                   --------->DEAR3(1)                                   >>>>>>>>>AtERF-3                                   --------->ATERF1(2)                                   >>>>>>>>>AtERF-5                                   --------->RAP2.3(2)                                   --------->RAP2.3(3)                                   --------->RAP2.6(2)                                   <---------ATERF1(2)                                   --------->ANAC46                                   >>>>>>>>>AtERF-1                                   >>>>>>>>>AtERF-2                                  --------->RAP2.3(1)                                  --------->ERF1                           <------NtERF2                           <---------MYB52(1)                          <---------RAP2.6(3)                          <-----------HVH21                          ------>NtERF2                         --------->ANAC46                         --------->RAP2.3(3)                         --------->DEAR3(1)                                                 ------->GAMYB                       ------>NtERF2<---------RAP2.6(3)                                    --------->MYB46(3)                       <---------ATERF1(1)                                              <---------MYB111(2)                       <---------RAP2.3(1)                          XXXXXXXXXXXXXXXXXXXXX>MIR777-----                      <---------DEAR3(1) --------->TOE1(3)        <-------TEIL          --------->MYB46(3)                      --------->DEAR3(1) --------->TOE2(3)       --------->ARR14(1)     <---------MYB55(2)                     --------->ATERF1(1) <---------DAG2          --------->CCA1(2)  <---------MYB52(2)                    <---------ATERF1(1)------>NtERF2            <---------ARR14(2) <---------At4g35610                    <-----------HVH21--------->ATERF1(1)        --------->ARR11(1) ------>NtERF2<----             <---------ZAT18     --------->At4g35610      <-----------GT1          --------->At4g35610        <---------ANAC58<------NtERF2<------NtERF2     --------------->AtSPL8    --------->RAP2.3(1)        <---------ANAC58--------->ATERF1(1)       --------->At5g28300 ----------->RAV1(2)------->GAMYB -YAB1--------->ARR11(3)--------->RAP2.3(1)      ----------->GT1--------->ARR14(2)--------->DEAR3(1)   gccaagtagttcttgctcactccgtcgccgtcattagccgccaccttaagacggtaatttgtaccagatacgacctgagtctcgccgctaacaaccgtct  19304000                                                                                                    -                                                                                                   ==                                                                                                   <-                                                                                                   --                         <-------GAMYB                                                            <--                        --------->MYB52(2)             ------>ZmHOX2a(2)           <---------ANAC46--                        <---------MYB46(3)            --------->GLK1(1)    <---------MYB52(1)     <--                        --------->MYB55(2)       <---------At5g28300     --------->ANAC55(2)      <--                      <---------MYB52(1)     --------->ARR14(2)          <---------ANAC55(2)      ---            --------->ARR14(2)               <---------ARR14(2)       --------->ARR14(2)         ----            <---------ARR14(2)           --------->LBD16              <---------ARR14(2)         ----            <---------GLK1(2)   <---------LBD16 <-----------GT1       <---------PCF2             ==== ---->HSFB2a(2)       XXXXXXXXXXXXXXXXXXXXX>MIR833-5P <------ZmHOX2a(2) <-------TEIL             ---- -----HSFB2a(2)     <---------ANAC46  --------->ATERF1(1)   --------->ANAC46      <---------At4g35610   cgaacttgagtcccgattcgctccgtttgttgtactcggagaccgcgaattcaccgatctctacgacttgagggtccgtaacgttgctgatgggactcca  19304100               --------->RAP2.6(2)               --------->DEAR3(1)              --------->RAP2.3(1)              --------->ATERF1(1)             <---------ZAT2             --------->ZAT2             <---------ATERF1(1)             <---------At4g35610             --------->At4g35610          --------->ATERF1(1)         <---------ATERF1(1)         <-----------HVH21      <---------LBD16      ------>NtERF2     --------->O2     =======================MYC_MYB     <---------O2     --------->TGA1a     <---------TGA1a  ------->GAMYB----------->RAV1(1)  ----------->HVH21  --------->DEAR4(1)  --------->DREB2C(2)  --------->DEAR3(1)  =============MYC_MYB  --------->At1g77200 --------->MYB46(3) --------->DEAR3(2) -------->MYB52(1)       <------NtERF2 ==============MYC_MYB <---------ANAC46 --------ALFIN1--------->RAP2.3(2) ----->GAMYB <------NtERF2 -------MYB111(2)<------NtERF2 ------->AtMYB61 <----------CDC5             ------>NtERF2 -------MYB52(2) <-----------RAV1(2)        --------->DEAR3(1) -------MYB55(2)--------->At4g35610       <---------ATERF1(1)                                       < ------>MYB46(3)--------->LBD16     <------ZmHOX2a(1)                                              <- -->MYB46(1)<---------ATERF1(1)   --------->ALFIN1                                               <--- -->MYB83------>NtERF2 <---------ANAC58 --------->SPL7                                      <-------- ==============MYC_MYB<-----------------------TaNAC69(2)                                   <---------ANAC58 ---->P --------->LBD16<---------ANAC58<------ZmHOX2a(1) <------ZmHOX2a(1) <---------MYB59 <---------ANAC58   accaccgacgcgggcagccgcagaggcgtagagagggaggaggacgacgacgagagagaggagaagaaggaagacgaccttactagtcattttgctttgt  19304200                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                             --------->TGA1a                                                                             <---------ANAC55(2)                                                                             --------->O2                                                                             <---------O2                                                                           <---------TGA2(2)                                                                          ----------->HVH21                                                                        <---------ANAC58                                                                    ------->PIF5                                                                    <-------MYC3                                                                    <-------MYC2                                                                    <-------MYC4                                                                    ------->MYC2                                                                    ------->MYC4                                                                    ------->MYC3                                                                    <-------PIF5                                                                   --------->bZIP60(2)                                                                   ====================bZIP_bZIP                                                                   <---------O2                                                                   <<<<<<<<<<HY5                                                                   >>>>>>>>>>HY5                                                                   <---------PIF3(3)                                                                   --------->O2                                                                   <---------bZIP60(2)                                                                   --------->PIF3(3)                                                                   --------->TGA1a                                                                   <---------TGA1a                                                                  ------>NtERF2                                                                 <---------ALFIN1                                                               <------NtERF2 <---------bZIP60(2)                                                              --------->ANAC46   --------->ALFIN1                                                              --------->ANAC58 --------->ALFIN1                                                           --------->ARR14(2)<---------TGA1a                                                       ---------->DOF2  <---------ANAC58                                                       ================================bZIP_DOF                                                       ======================bZIP_DOF                                                    --------->TOE2(3)   <---------AtLEC2          ------>ZmHOX2a(1)                       <-------TEIL--------->ANAC58 <-----------RAV1(1)  <---------MYB52(1)                         --------->AHL20(2)------>NtERF2 --------->ANAC55(2) -----------RAV1(1)  <---------ICU4       <----------DOF2  <---------ARR14(2)<---------ANAC55(1) -----------AtMYB77  *TSS                 ===================================bZIP_DOF   --------->GLK1(1) --------GT1        <---------YAB1        =============================================bZIP_DOF     < --DOF2  --------->TOE2(3) <------------CBF  ----------->TBP <-------TEIL ----------->TGA1          -   aactgttgtttcctcaaaattgattatggcattgagtttaagggcttttaaatacattaaaggtccgccacgtggcatgacgtgtggcagaattctagat  19304300                                  --------->ANAC58                                  --------->ANAC46                                  --------->ANAC58                                 <-------MYC3                                 <-------MYC2            --------->AHL20(2)   ------->MYC3                                         <----------DOF2            <---------AHL20(2)   ------->MYC2       --------->DAG2            <---------DAG2   --------->YAB1     --------->TOE2(3) --------->ATHB51         <----------DOF2     <---------ANAC58 ---------HSFB2a(2)   --------->TOE1(3) --------->AHL20(2)     ------->TEIL   <----------DOF2 -------->HSFB2a(2)   --------->YAB1   --------->ICU4----------->GT1  <---------YAB1 <---------ANAC58   ttctagcagaatatttatttctaatcttaataacacatgccataatttaggcaaaaggtttaatgaacttttatgaaaaacttttttgctttgtatttca  19304400                           <-----------GT1                       <---------ICU4                      <---------AHL20(2)                      --------->AHL20(2)                      <---------ATHB51                ----------->GT1            <---------AHL20(2)                                                                   ----            --------->ATHB12                                                                   ------           --------->AHL20(1)                                                   --------->AHL20(2)           --------->AHL20(2)                                   --------->YAB1  <---------AHL20(2)           <---------AHL20(1)      --------->ANAC55(2)         <---------At4g35610    ----------->GT1           <---------AHL20(2)--------->ZAT6                    --------->At4g35610   <---------TOE2(3)    <-----------GT1   --------->ICU4       <----------DOF2<---------GLK1(1)    --------->AHL20(2)<---   aaatttatactaatttattggtaaataattaacactcacataattctttatatgttatggaattcagcataatatagacaaattaatgaggtttatcctc  19304500                                                        --------->CCA1(1)          <---------YAB1                                --------->RVE1(1)         <---------ARR11(3)                         <---------AHL20(2)        --------->GLK1(1)                           --------->AHL20(2)        <---------GLK1(1)                     --------->ANAC46     <------MYB83                             --------->ANAC58     <------MYB46(1)                          --------->ANAC58          --------->ZAT6   <--------P                                ------>MYB83              <---------YAB1          ------ ----->HSFB2a(2)   <---------AHL20(2)        ------>MYB46(1)         <---------ICU4           <------ >ZmHOX2a(1)     --------->ANAC55(2)       --------->TOE2(2)      <------ZmHOX2a(1)        <---------YAB1 ------HSFB2a(2)<---------TOE2(3)          --------->TOE1(2)  ---------->DOF2            <-----------GT1   tagaggttggatatcatttatgtaatttgcaatggccaacttctacctacgaaaataaatatccaaaaggattatgactacttgtagttttttacgatta  19304600                                                                                    --------->ANAC58                                                                                    --------->ANAC58     <---------YAB1                 <------ZmHOX2a(1)             <------ZmHOX2a(1)--------->DAG2     <---------AHL20(2)            <----------ID1                <----------ID1   ---------->DOF2 --------->YAB1                 ---------->DOF2               ---------->DOF2  <---------AHL20(2) --->YAB1               <---------ZAT6 ---------->DOF2  <-----------------------TaNAC69(2) ---------- ---YAB1                <---------ANAC46   ---------->DOF2 <---------ZAT6      --------->AHL20(2) <--   taagcatattattcaatagacaagtagtgtatagcaaaggacaaagaaagaacataaatgagtgtaaaggacaaaaactaattaaaaagcaagacgttat  19304700  Previous    Next  AGI:  At5g47550.1    Description:  cysteine protease inhibitor, putative / cystatin, putative. Identical to Cysteine proteinase inhibitor 5 precursor (CYS5) [Arabidopsis Thaliana] (GB:Q41916;GB:Q8LBN6;GB:Q9FGK2); similar to cysteine protease inhibitor family protein / cystatin family protein [Arabidopsis thaliana] (TAIR:AT4G16500.1); similar to cystatin domain containing protein [Brassica oleracea] (GB:ABD64972.1); contains InterPro domain Proteinase inhibitor I25, cystatin; (InterPro:IPR000010); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) Range:  from: 19303676    to: 19304221    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g47560.1    Description:  ATSDAT/ATTDT (TONOPLAST DICARBOXYLATE TRANSPORTER); malate transmembrane transporter/ sodium:dicarboxylate symporter. Identical to Tonoplast dicarboxylate transporter (TDT) [Arabidopsis Thaliana] (GB:Q8LG88;GB:Q9FEH9;GB:Q9FGK1;GB:Q9MAW4); similar to vacuolar citrate/H+ symporter [Citrus sinensis] (GB:ABK27327.1); similar to sodium-dicarboxylate cotransporter, putative [Brassica oleracea] (GB:ABD64997.1); similar to sodium/dicarboxylic cotransporter, putative [Brassica oleracea] (GB:ABD64928.1); contains InterPro domain Sodium/sulphate symporter; (InterPro:IPR001898) Range:  from: 19304595    to: 19307691    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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