Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------AHL20(2)                         --------->ARR11(3)                 <---------YAB1                 <---------AHL20(2)                 --------->AHL20(2)          <---------TOE2(3) <---------ANAC55(2)  --------->TOE2(3)      <---------ARR11(3)   <---------ANAC58                                      - -------->ARR11(3)     <---------YAB1    <----------DOF2    <---------AHL20(2)                  ----- ---------ARR11(3)     <---------TOE2(3) <---------DAG2    --------->AHL20(2)          --------->At4g35610 ----AHL20(2) ------->TEIL--------->CCA1(2)   <---------ANAC58     <-----------GT1     <---------At4g35610   aaaatcttatttgatgtatataattaagatatgtaaatgaatactttttcttggtttgaaattttatattttctcgtttattcaagagcagttgacaaaa  19291900                                                                              ----------->GT1                                                                              <---------ANAC55(2)                                                                              --------->ANAC55(2)                                                                         <---------ICU4                                                                         --------->ATHB51                                                                         <--------HAHB4                                                                   <---------ZAT2                                  <-----------GT1                  --------->ZAT2    ---------->DOF2              <-----------------AGL2                               <---------At4g35610  ----------->GT1            ----------->GT1         <------ZmHOX2a(2)  <---------YAB1 --------->DOF2<---------------AGL15                <---------ARR11(3)  --------->ICU4             <- ----->DOF2   <-----------------AGL3     --------->ZAT14           --------->At4g35610    --------->MYB59   aagaaagaaaaaaaaaactaattttggagaaatgtataaccagtgtaatacatagatcacagatggctcagctcattattaagtaataaaagtaggccca  19292000                                                             --------->DAG2                                                            ---------->DOF2                                                           <---------MYB52(1)                                                          --------->At5g28300                                                         <---------ANAC46                                                        <------NtERF2                      <---------PCF2                    --------->RAP2.3(1)              <---------MYB52(1)             --------->YAB1 <---------ANAC46           ------>NtERF2                    <-------GAMYB        --------->AHL20(2)  <---------ANAC58          <---------DEAR3(1)            ------------>MYB.PH3(1)        <---------AHL20(2)  <---------ANAC58          --------->ANAC46 <-----------GT1 ----------->GT1 --------AHL20(2)  --------->ALFIN1                   --------->DEAR3(1)  ----------->RAV1(1)   ttttatctaataaaatcgtaagtgggccttccttgttttctaaacaaacaaaaacgacgccgtaaagcagaattaacaacacaaaaataccgttattctc  19292100                                ------>NtERF2                               --------->DEAR3(1)                              <------NtERF2                             ------>NtERF2                            --------->ANAC46                            <---------DEAR3(1)                           --------->LBD16                          --------->ANAC46         <---------GLK1(2)                         <---------LBD16     <---------ICU4                         XXXXXXXXXXXXXXXXXXXXX>MIR173                        >>>>>>>>>>E2Fe       --------->ATHB51                        >>>>>>>>>>E2Ff       -------->ATHB1                        >>>>>>>>>>E2Fc      <---------ATHB12                                   ------                        >>>>>>>>>>E2Fd      --------->ICU4             <----------DOF2  ------------>CBF                        >>>>>>>>>>E2Fb      <---------ATHB51         <------------------------ANAC81                    <---------DAG2        --------->WOX13(1)      <----------DOF2   <---------ALFIN1               <---------MYB46(2)       <---------ATHB12          <---------DAG2   <---------At4g35610       <----------DOF2  >>>>>>>>>>E2Fa  ------------>CBF      --------->ZAT14   ------>ZmHOX2a(1) <----------DOF2    <----------DOF2   --------->GLK1(1)       <---------ZAT14  --------->TOE2(3)   tctctttctctttctcgcctaacttttcccgcgccgagagaaatcaattattcgattctctcactgaacttttcttttcttcctcagcacttcaatgcat  19292200                                                                            --------->ANAC46                                             <---------GLK1(2)              --------->ANAC58                                    <---------HSFB2a(2)           --------->LBD16                                    --------->HSFB2a(2)          <---------ANAC46                   <XXXXXXXXXXXXXXXXXXXXMIR1888                  <---------ANAC58                  <----------DOF2   <---------HSFC1(1)           <---------ANAC58         --------->ARR11(3)     ------------>CBF              <---------LBD16              <---------LBD16           <---------ARR11(3) ->TEIL      <<<<<<<<<TBF1      <---------GLK1(1)     --------->GLK1(2)     --------->ANAC58   <-----   ctatttcatcaattcttcttctttacaagttttgaattctggaaacagagtcgcataatctatcgttgcggatgatgcaagaaacagacagagatattca  19292300                                                                ----------->GT1                                                                <---------ANAC46                                                                <---------ANAC55(2)                                                    <-------GAMYB        <---------ANAC58                                                   <---------MYB46(3)    <---------ANAC58                                                  <---------AtMYB61  <---------ANAC58                                        <---------ICU4          <---------ANAC58                                        --------->YAB1          --------->ANAC55(2)           -------                           --------->At4g35610  --------->CCA1(2)    <---------ANAC58        --------                    --------->ANAC58   <---------ATHB12         <---------ANAC58           <---------MYB111(2)                    --------->ANAC46   --------->ICU4      <---------ANAC58                <---------MYB111(1) ------GT1          --------->ANAC58   <---------ATHB51    <---------ANAC58     ------>ZmHOX2a(1)   catctctgatggtaccatgaacaaggaagagcagagcccaaataatgaagagatggttgaagcgtttcgtaacttgcttctcctccatggccacttacct  19292400              <---------YAB1            --------->YAB1  --------->ANAC58           <------ZmHOX2a(2)--------->ANAC58      <-------PIF5         <---------TOE2(2)      ------->PIF5         <---------TOE1(2) --------->ANAC58         <-----------RAV1(2)         ------->GAMYB --------->ANAC58<-----------GT1                ------>ZmHOX2a(1)            <-----------GT1  <------MYB83 -->ANAC55(2)--------------------->WRI1    --------->YAB1             <--------P              <------MYB46(1) >P <---------LBD16  --------->ANAC46    <---------ARR11(3)           <---------WOX13(1)     --------   gataagcacggggatcataatacacttcgcaggtaatcttcaaaatcatcctataaccccaaaatcaccctggttgatttttcttctcaaaatgttaggt  19292500                                                                                                  ---                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              =======                                                                                              <------                                                                   <---------ZAT14            =======                           --------->GLK1(1)                       --------->ZAT14            -------                      ----------->GT1                              --------->ZAT18            <------                    ------>ZmHOX2a(2)                         <---------ANAC58                <------                  <---------AGP1                              <---------ANAC46          ------>ZmHOX2a(2)                  --------->ARR11(3)                          <---------ANAC58   <---------ARR14(2)             --------->GLK1(2)                             --------->ALFIN1--------->DAG2     -------            <---------GLK1(2)                     --------->YAB1   <---------ZAT18    --------->ARR11(3)            <---------ARR11(3)                    --------->AHL20(2)      ===========================            --------->ARR11(3)          <----------DOF2  <---------bZIP60(2)     --------->ARR14(2)-- ->MYB59   <---------RVE1(1)    ---------->DOF2   <---------AHL20(2)      ---------->DOF2   <--------   ttcttaaaatgagagattttgatctggagaaatctaaagaggcttttctcaattatatgaagtggcgagtggactataaagtggatttgatctctcaggt  19292600    ---------->DOF2 -------->GT1 -->TGA1a ---TGA1a -->O2 ==============bZIP_DOF ---O2--------->DAG2                          <---------YAB1 ==============bZIP_DOF             --------->DOF5.7(2) -->ZAT2                            <---------MYB52(1) ---ZAT2                           --------->TOE1(3) <---------ANAC58 ---At4g35610        <---------ANAC58      <---------YAB1 -->At4g35610        <---------ANAC58 <---------DOF5.7(2) ===bZIP_DOF    <---------DAG2     --------->TOE2(3) <---------ANAC58 --------->GT1  <----------DOF2   <---------ANAC46  --------->At4g35610  --------->ANAC46      <----- ---RAV1(2) <------ZmHOX2a(2)<---------YAB1<---------TOE2(3)      --------->ALFIN1----------->HVH21   gagttaaaaaggcgatcactttttcttgtttatgtttcgttaactaagattattagcttactcacaaggtgttcgacgaaatgtctgacagaagtttaag  19292700                                                                                                   --                                                                                                   --                                                                <------MYB83                   ------         ----------->GT1                          <---------ETT(2)      <---------AHL20(2)    <------   <------ZmHOX2a(1)    <---------ICU4        <---------TOE2(3) <------MYB46(1)       <---------LBD16 <---------TOE2(3) --------->ANAC58           --------->DAG2  <--------P<-----------GT1      -------- ----TOE2(3)       --------->ANAC58       --------->YAB1     <---------MYB52(1)      <---------LBD16   tttgaggaatatggtgaagtcaagaaacattaccctcatgggtttcataaggtagacaaaactggtaggcctatttacattgagagactcgggatgactg  19292800  Previous    Next  AGI:  At5g47510.1    Description:  SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein. similar to SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative [Arabidopsis thaliana] (TAIR:AT2G21540.2); similar to SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative [Arabidopsis thaliana] (TAIR:AT2G21540.1); similar to SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative [Arabidopsis thaliana] (TAIR:AT2G18180.1); similar to CRAL/TRIO domain containing protein [Brassica oleracea] (GB:ABD64976.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal ( Range:  from: 19292275    to: 19294283    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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