Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                -----                                                                                             --------                                                                                             <-------                                                                                            <------NtERF2                                                                                           --------->LBD16                                                                                          --------->LBD16                                                               <-----------HVH21         <---------LBD16                                                               <-----------TGA1          <------NtERF2             ------->MYC3                                     <---------ANAC58          ------>NtERF2             <-------MYC3                               ------->TEIL                    <---------RAP2.3(1)       <---------ZAT18                       --------->ZAT2   <---------ANAC58         --------->ETT(2)       --------->ZAT18                       --------->At4g35610                       <---------DEAR3(1)  ---------->DOF2            <---------ANAC46<---------At4g35610    ---------->DOF2  <-----------HVH21 --------->YAB1    --------->MYB52(1)        <---------ZAT2<----------DOF2          <-----------RAV1(1)   gaatcaaagtgtacatgtggcaaacagacctgtgtgtttatgaccgtagctggacatgaagctttcgtcacaaagaaacgtagccattgtcgccggaaac  19281500                                                                                                   --                                                                                                   --                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                              ------>NtERF2                                                                                             --------                                                                                            <------NtERF2                                                                                            ---------                                                                                           ------>NtERF2                                                                                           <---------ATERF1(1)                                                                     <----------DOF2      --------->DEAR3(1)                                  --------->GLK1(1)                 ------>ZmHOX2a(2)    --------->RAP2.3(1)                                  <---------GLK1(1)                <------ZmHOX2a(2)    <---------RAP2.3(1)                                  --------->CCA1(2)               --------->ARR11(3)    <---------ATERF1(1)                             --------->ANAC55(2)                  <---------ARR11(3)   ==============                             <---------ANAC55(2)                  --------->ARR14(2)   <---------DEAR3(1)                           <-----------GT1                        <-----------ARR10    ------>ZmHOX2a(2)         ---------->ID1 --------->MYB111(1)                       --------->AGP1      =============== ---->ANAC58    --------->ATHB12 <---------ARR11(3)               <---------AGP1      <------ZmHOX2a(2) ---->ANAC58  --------------->AGL15                               <---------ARR14(2) --------->ARR14(2) ->ARR14(2)   <---------------AGL15--------->MYB52(1)            <---------CCA1(2)   <---------ARR14(2) --ARR14(2)   ------>ZmHOX2a(1)  --------->ARR11(3)    <---------ANAC46      --------->AHL20(2)------   gctcttggtttgtctccttcattgagtagttacgagatatcggaaattttgtaagtttcttagacacagatctttgcatttaaaacagatcggcgccaac  19281600        <---------ANAC58        <---------ANAC58        <---------ANAC46  ------>ZmHOX2a(1) ---->MYB83 ---->MYB46(1) --->GAMYB ----->AtMYB61 ---->MYB46(3) -----MYB55(2) -----ATHB12 -->P   <---------ANAC55(2) >MYB46(1)                                                                      <---------TOE2(3) ->DEAR3(1)                                                                     <---------TOE1(3) >ATERF1(1)                                 --------->YAB1 <----------DOF2<---------bZIP60(2) ========HOX2a_HOX2a                      ------->TEIL--------->YAB1      <---------ANAC46      <---- ========HOX2a_HOX2a           ----------->GT1 <------------CBF          <---------TOE2(3)      ----- >MYB83<-------TEIL    --------->ICU4  <---------YAB1<---------YAB1    ----------->TGA1      --------   catcctcgatgcgtatagaaatgtcattaagaagagataatatgaatcacattgtatgatacttttgttgagaatgacgttgaaggttgagatggaaaag  19281700                                                 <----------DOF2                                                 ------>ZmHOX2a(1)                                                 =======================HOX2a_HOX2a                                             ------->TEIL                                             --------->ARR14(2)                                             --------->GLK1(2)                                             <---------ARR14(2)      --------->GLK1(2)              <                                          --------->ANAC58          <---------GLK1(2)               <                                  --------->ARR14(2)             ------>ZmHOX2a(2)                 -- -----HSFC1(2)                    <---------ARR14(2)           <---------ARR14(2)              ------ ---->HSFC1(2)          ---------->DOF2<----------ID1 <---------TOE1(2)        <------NtERF2   ====== -->DOF2               <------ZmHOX2a(1)  --------->ANAC58     --------->ARR14(2)      <---------ALFIN1   cttcgaatagacgtttaagttattaggaaagtagcaaatttgggacgaatcctttctaggttttggatcggaatctatggcatcgtgctccacttgatcg  19281800                                                                    <---------YAB1                                                                    <---------AHL20(2)                                                                   --------->AHL20(2)                                                                   <---------AHL20(1)                                                                   <---------AHL20(2)                                                            ----------->GT1                                                         <-------TEIL                                                        --------->ARR14(1)                                      <----------DOF2   --------->GLK1(2)                                --------->ANAC46        --------->CCA1(2)                               <---------LBD16         <---------ARR14(2)                             ----------->HVH21         --------->ARR11(1)                            <-----------HVH21          <---------GLK1(2) ---------ANAC58         ------>ZmHOX2a(1)             --------->ARR14(2)                        ---- ---------ANAC58      <------ZmHOX2a(2)              ----------->ARR10         <-----------GT1 <----- ---->NtERF2         <---------ARR14(2)        <---------ANAC46    --------->AHL20(1)  <----------DOF2 >ZmHOX2a(2)         --------->ARR14(2)   <-----------RAV1(1)     --------->YAB1   <---------CCA1(2) ===============================HOX2a_HOX2a   <---------LBD16 <--------P    <---------GLK1(2) <------   ctgcgttctatagagcttcttccgatcctctctcacggcgatttttgttggggattagattcgggttaatataattccgattttcatctctttttcgatt  19281900                                ----------->HVH21                               <-----------RAV1(2)                              ====================HOX2a_HOX2a                              <------ZmHOX2a(2)                             --------->ARR14(2)                                         <---------ZAT2                             <---------ARR14(2)         --------->ANAC58                --------->At4g35610                     --------->ZAT2                     --------->ANAC58         <---------ALFIN1        <---------GLK1(2)   <------ZmHOX2a(1)--------->GLK1(1)                  --------->MYB46(3)  <---------ANAC58   <---------ZAT2          <---------GLK1(1)                  <---------MYB55(2)  <---------ANAC58  <-----------RAV1(1)     <---------ARR14(2)            --------->KAN4(2)<--------- ----->ATHB12       =================HOX2a_HOX2a    <---------HSFB2a(2)<---------ANAC58 <---------At4g35610 ----WOX13(1)       =======================RAV      --------->HSFB2a(2)<---------ANAC58 --------->ZAT2 ------CBF          ------>ZmHOX2a(1)      <------ZmHOX2a(1)         <---------YAB1 --------->DEAR3(1)   gatggcttcggcttctcaattcctgctggaggatcagacggatgaggatttcttcgacaagcttgttgatgatgcttattctcccaccgaagctcaggct  19282000                                                                                              -------                                                                                            <--------                                                                                           <---------LBD16                                                                                      <----------DOF2                                                                                      ------>ZmHOX2a(1)                                                                                    =================                                                                                    ------>ZmHOX2a(2)              <---------At4g35610                                                  ==================              --------->ZAT2                                    <---------ARR11(1) <------ZmHOX2a(2)              <---------ZAT2                            <----------DOF2           --------->ARR14(2)              --------->At4g35610                       <---------DAG2            <---------ARR14(2)          <---------ANAC46                     <---------GLK1(1)------->TEIL      <---------GLK1(2)       ----------->HVH21                       --------->bZIP60(1)                <---------ARR11(3)      <-----------HVH21                   <---------At4g35610  <---------GLK1(2)  --------->ARR11(3)   ------>ZmHOX2a(1)           ---------->DOF2 <---------bZIP60(1)            ---------->DOF2 <------NtERF2 --RAV1(2)<---------bZIP60(2)<---------YAB1  --------->YAB1    <---------CCA1(2)----------->ARR10<---   tcatcctctgtgacggagctgaagttcgacgatgaaagtgactccgatgatatcagagctttttcgaatctctctattggtaaagatcctttgggcggag  19282100                                                                 <------NtERF2                                                                --------->MYB55(2)                                                                <---------MYB46(3)                                                               --------->ALFIN1                                                             <------MYB83                                                             <---------ANAC58                                                             <------MYB46(1)                                                             <---------ANAC46                                                             <---------ANAC58                                                            --------->MYB55(2)                                                            <---------MYB46(3)                                                            <---------DEAR3(1)                    <--                                                            --------->MYB46(2)                    <--     --------->ZAT18                                        --------->MYB52(2)                 <----- -->ATERF1(1)                                             <---------ARR14(2)                  ------- -DEAR3(1)               <---------LBD16                  <---------MYB52(1)                 -------- ===HOX2a_HOX2a      --------->ICU4                       --------->ARR14(2)                 <------- ===HOX2a_HOX2a --------->ANAC58                         <---------SPL7          --------->REM1(1)--- ---ZmHOX2a(1)  --------->ANAC58                        <---------MYB46(3)  ------->TEIL    <--------   gagatggcacactgaatgaagcaattttggggaacgatgttgcaaacgagggtgcaagcggttcggtgggggaagacgagccttcatctattgctccgga  19282200                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                 <---------ARR14(2) -------At4g35610                                                --------->ARR14(2) -------ZAT2                                                 <---------ZAT2 ----MYB52(1)                                                --------->At4g35610 -->LBD16                                                    <---------At4g35610                  --- ->HSFB2a(2)                                               <--------P                             --- --HSFB2a(2)                                        <------ZmHOX2a(2)                             --- ------>At4g35610                      --------->ICU4------>ZmHOX2a(2)                         ------ -LBD16                              --------->CCA1(2)  <---------TOE2(2)               ---------->DOF2   agctgttcaatttccccatagtgatgcaagggaattaagagatgatgaaatgagatcggaggtagctgatatgccactatctgaaacagcaaaagaatgc  19282300                       ------>ZmHOX2a(1)                      <---------LBD16                                                     <------MYB46(1)                     ----------->RAV1(2)                                                  <------MYB83                   <---------GLK1(1)                                                     --------->MYB59                   --------->GLK1(1)                                                     <---------AtMYB61                  <---------GLK1(1)                                                 <---------TOE1(2)                  --------->GLK1(1)                                                 <---------TOE2(2)               <------NtERF2                                                     <---------ANAC46      --------->MYB52(1)                                                         <---------MYB46(3)      <---------DOF5.7(2)  <-------GAMYB                                         <---------TGA1a    --------->DOF5.7(2)--------->LBD16                       --------->ARR14(2)  <---------ANAC58 ------>ANAC46 --------->LBD16                             --------->LBD16       <---------ANAC58 ------>ANAC58<---------LBD16          --------->ATHB12   <---------ANAC46 --------->MYB52(1) ------>ANAC58--------->LBD16    <------ZmHOX2a(1)       <---------LBD16  ----------->HVH21  <-------TEIL --->ZAT18   <---------LBD16   <---------TOE2(3)<-------TEIL <---------ARR14(2)<-----------HVH21   acgatagttaacgagcccgggattcctggggttaaggagctagattggggttcatttgatgcggatttatctgtaaatgacggtcgtgggtttggttcat  19282400  Previous    Next  AGI:  At5g47490.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47480.1); similar to hypothetical protein 24.t00016 [Brassica oleracea] (GB:ABD64938.1); similar to hypothetical protein 24.t00015 [Brassica oleracea] (GB:ABD64937.1); similar to hypothetical protein 25.t00024 [Brassica oleracea] (GB:ABD64978.1); contains domain PTHR13402 (PTHR13402) Range:  from: 19281902    to: 19288027    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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