Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------AHL20(2)                                               --------->AHL20(2)                                   <---------YAB1     ---------->ID1                                 --------->YAB1<---------AHL20(2)           <---------YAB1   <---------At5g28300--------->AHL20(1)                         --------->ZAT14        <---------YAB1    <---------YAB1       <---------AHL20(1)                 --------->YAB1      <--------HAHB4    <---------ICU4        <---------AHL20(2)                --------->ANAC58      --------->YAB1    <---------AHL20(2)    --------->AHL20(2)             <---------ATHB12     <---------YAB1    --------->AHL20(2)  --------->AHL20(2)             <---------AHL20(2) -------->GLK1(2)  ------>ZmHOX2a(2)    <---------ANAC55(2)  <-----------RAV1(1)--------->ANAC58<----   acaatctattattatgtctgatctatttattacagtgataatacataaattaatttgttttttttgttgttgttgtttaatcaagcatacactgtattct  19274200                                --------->TOE2(3)                 --------->YAB1                           <---------AHL20(1)                     --------->ATHB51                           --------->ARR11(3)                --------->WRKY18(1)                           <---------AHL20(2)               --------->At5g28300            <---------                           --------->AHL20(1)       --------->AHL20(2)                 <---------ICU4                        --------->AHL20(2)          <---------AHL20(2)      --------->ATHB12   ------                 --------->TOE2(3)     <----------DOF2     ----------->GT1 <---------YAB1 --------->YAB1 ------DOF2     ----------->GT1----------->GT1<------ZmHOX2a(1)  <---------ATHB12     <---------YAB1   ttatattttgttcgaaaaacgttatataaaatattgttaatctttttaggacataaaaatgcggtcaataatcgatagttattggctcataatcgtcact  19274300                                                       --------->YAB1                                             --------->LBD16                                             ----------->GT1                                            <---------HSFB2a(2)                                           <---------LBD16                                         <---------ARR14(2)                                         --------->ARR14(2)                                        <---------GLK1(1)     ---------->DOF2                                    ----------->GT1  --------->AHL20(1)                                   ----------->GT1   --------->AHL20(2)                  --------->HSFB2a(2)  ----------->ARR10  <---------ICU4   --------->ICU4 <---------HSFB2a(2)--------->At5g28300  --------->YAB1   --------->AHL20(2)        <---------------AGL15  --------->YAB1<---------GLK1(2) --TGA1     ------->TEIL     --------------->AGL15--------->AHL20(2) --->ICU4<---------YAB1    <-------TEIL---------->TaMYB80--------->ICU4                      ------>ZmHOX2a(2)   atgaaatatttatgaatcttatggaaacatacatataagggtaaatccggaaaaaaataataatcaaagagtctctctctctctctctcattcgatctcg  19274400                                          --------->LBD16                                         <---------HSFB2a(2)                                         --------->LBD16                                        <---------LBD16                                        <---------ANAC46                                       =============================HOX2a_HOX2a                                       ------>ZmHOX2a(2)                                       <---------LBD16                                      ==============================HOX2a_HOX2a                                      <------ZmHOX2a(2)          --------->HSFB2a(2)                                      --------->ARR14(1)     =======================HOX2a_HOX2a                                      --------->CCA1(2)      <----------DOF2                                     --------->ARR11(3)      ------>ZmHOX2a(1)                                     --------->AGP1----------->HVH21         ------>MYB46(1)             --------->ARR11(1)  ------->TEIL         ------>MYB83                --------->ARR14(2)  <---------ARR14(2)       --------->MYB46(3)            <---------ARR14(2)  --------->ARR14(2)  ------>ZmHOX2a(2)       --------->DEAR3(1)          ----------->ARR10     --------->GLK1(2) --------->ARR14(2)       --------->DREB2C(2) ------>ZmHOX2a(2)       ----------->TGA1        <---------ARR14(2)      --------->DEAR3(2) <---------ARR14(2)  --------->GLK1(1)   <---------HSFB2a(2)    <-----------GT1      --------->ARR14(2)  <---------GLK1(1)  <---------LBD16               -------   acgatttcaccgactaatcggagtttggatcggagattagatccgggaaatcactgacgaatcctttctggattttggatcggtctatgcttctctactc  19274500                                                                            <---------ARR11(3)                                                                            --------->ARR11(3)                                                                          --------->WRKY12                                                                         <---------MYB52(1)                                                                      <-------TEIL                                                                      ------>ZmHOX2a(2)                                                                     <------ZmHOX2a(2)               <---------HSFC1(1)                                   --------->AGP1               --------->HSFB2a(2)                                  <---------ARR11(3)               --------->HSFC1(1)                                   <---------ARR14(2)              <               <---------HSFB2a(2)                                  --------->ARR14(2)            <--         --------->ARR11(3)                                  <---------ANAC58                  <-----         <---------ARR11(3)                                 --------->HSFC1(2)                 <-----     ------>ZmHOX2a(2)                              <---------DAG2 <---------GLK1(1)           <-----   <---------ARR11(3)                 <------------CBF      <---------HSFC1(2)   <----------DOF2-----   --------->ARR11(3)   <-----------GT1     ------>ZmHOX2a(2)<---------ANAC58 ------>ZmHOX2a(2)<----- -->ANAC46 ------>ZmHOX2a(2)       ------------>CBF <----------DOF2<---------At4g35610        <------   tacttgatcttgatcttctagaaatttaacttcgttttgcaattgatcgtctcgctttaagaagcttgcagatccgttgatctctttctgtgattttgcg  19274600     <---------ZAT6    <---------TOE2(3)    <---------TOE1(3)                                               ------>ZmHOX2a(1) ----------DOF2                                                     --------->HSFB2a(2)   <---------GLK1(1) -------ANAC46                                 <---------ANAC46     <---------HSFB2a(2)   --------->GLK1(1) ----ANAC58                                    <---------ANAC58   ----------->RAV1(2)    <---------ARR14(2) ----ANAC58                              <---------YAB1     <---------GLK1(1)           <------ZmHOX2a(1) ----ANAC46                            --------->YAB1       --------->GLK1(1)       <---------TOE2(1) ---->LBD16     <---------AHL20(2)------------>CBF     --------->At4g35610       --------->TOE1(2) ----LBD16<---------TOE1(3)     <---------MYB46(3)     <---------At4g35610    --------->MYB52(1) ---LBD16 <---------TOE2(3)   <-------GAMYB    <---------ANAC58  ------>ZmHOX2a(1)  <---------TOE1(1)   gggtttagggttagggttttaatttcgatttcggttgtcaattttgatggcttcgactgctgatttcctcctggatgatcaaacggacgaggatttcttc  19274700                                                                                            <--------                                                                                    ------>NtERF2                                                                                   <----------ID1                                                                                   <---------bZIP60(1)                                                                                   --------->ANAC58                                                                                   --------->bZIP60(1)                                                                                   --------->ANAC46                                                                                 <---------TGA2(2)                                                  --------->At4g35610           ----------->TGA1                           -------->P             --------->ZAT2              --------->At4g35610                           ------>MYB83--------->At4g35610       <<<<<<<<<<AtTINY2 --------->ANAC58                  ------>ZmHOX2a(1)    ------>ZmHOX2a(1)      ----------->TGA1<---------At4g35610            <---------ICU4 ------>MYB46(1)------>NtERF2       ----------->HVH21 ----------->HVH21           <---------YAB1 ------>ZmHOX2a(1)       <---------At4g35610  --------->ICU4  ---------->DOF2   gacaaacttgttgatgattcctatactcctaccgcttcatcctctgccaaggagctgaaattcgatgacggtagtgattccgatgacgccaaagcttttg  19274800                                                                                                 <---                                                                                                 <---                                                                                                 <---               <---------TOE2(3)                                                                 <---              <---------DOF5.7(2)                                                                <---             --------->WRKY45                                                                   -----             --------->WRKY12                                                                   <----             --------->WRKY38(1)                                                                -----             ----------->HVH21       <---------REM1(1)                                          -----            --------->DOF5.7(2)    <---------At4g35610                                          <----           <-------GAMYB  <---------ANAC58                                                  <--------          <---------MYB46(3)----------->HVH21                                              --------->ALFIN1        --------->LBD16 <---------ANAC46                     <---------LBD16          <-------TEIL  < --DOF2 <-----------HVH21 <---------ANAC58                --------->ALFIN1          --------->ZAT18--   ctaatctctccgtcgttgacgatgttttgggtgatggagatgtcgcattgaatgaagcaggtttggggaacgatgttgcaaacgagggtacaagtggttc  19274900    ---------->DOF2 ---MYB46(1) ---MYB83 ------ANAC46 ------ANAC58                                                                                     <-- ------ANAC58                                                                                     <-- ---->MYB46(2)                       --------->At4g35610                                       ------ -----DEAR3(1)                       <---------ZAT2                                    <---------ANAC58 ---->MYB55(2)                       <---------At4g35610                               <---------ANAC58 ---->MYB52(2)                    <---------MYB52(1)                                  <---------AtMYB61 -----MYB46(3)                   --------->LBD16                                      --------->ALFIN1 -MYB46(3)                      --------->HSFB2a(2)                      <---------TOE1(3)    <------ZmHOX2a(2) ---------MYB46(3)              <---------HSFB2a(2)         --------->AtLEC2    <XXXXXXXXXXXXXXXXXXXXMIR170 ------->ALFIN1                <---------LBD16     --------->ETT(2)      <---------TOE2(3)<---------ZAT18   ggtgggaaaagaagagccttcttcatctattgctccggaagctgttcaatttgtcaacagtgatgcaaataggttaagggatgttgatgtggtgcgatcg  19275000                                                                <---------LBD16  <---------WRKY18(1)                                                        --------->HSFB2a(2)     --------->WRKY12                                                        <---------HSFB2a(2)     --------->WRKY38(1)                                                       =================HOX2a_HOX2a            --------->ZAT18                            ===========================HOX2a_HOX2a        --------->CCA1(2)                              ------>ZmHOX2a(2)      <-------GAMYB       --------->ARR11(3)                            <---------ARR14(2)      <---------MYB46(3)  <---------MYB46(3)          ---------->DOF2        --------->ARR14(2)    <------ZmHOX2a(1) --------->ALFIN1           <------ZmHOX2a(1)        ------->TEIL------>ZmHOX2a(1) -------DEAR3(1)    <---------------AGL15            <---------AGP1  <-------GAMYB  <-----------RAV1(1) -------AtMYB61  --------->MYB52(1) ----------->GT1  --------->ARR11(3)  <---------TOE1(3) >ZmHOX2a(2)<---------ZAT18 ==================================HOX2a_HOX2a<---------TOE2(3)   gaggtggatgatatggcactaactgaaacaggaaaagagagtaatatagtcgatggatctgggagtcctggggttaaggaggttgactggggctcgtttt  19275100  Previous    Next  AGI:  At5g47480.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47490.1); similar to hypothetical protein 24.t00016 [Brassica oleracea] (GB:ABD64938.1); similar to hypothetical protein 24.t00015 [Brassica oleracea] (GB:ABD64937.1); similar to hypothetical protein 25.t00024 [Brassica oleracea] (GB:ABD64978.1); contains domain PTHR13402 (PTHR13402) Range:  from: 19274647    to: 19280651    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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