Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->AHL20(2)                                       <---------AHL20(2)                                       <---------AHL20(1)                                     <---------AHL20(2)                  ------>ZmHOX2a(1)               <----------DOF2   --------->ANAC55(2)                    --------->TOE2(3)     <----------DOF2             <---------ANAC55(2)                 <---------ARR11(3)     <---------DAG2            --------->AHL20(2) --------->GLK1(2)  --------->ARR11(3) <---------ARR11(3)  <-----------GT1              <-----------GT1  <---------AHL20(2)  --------->CCA1(1)   --------->ARR11(3)  ---------->ID1            ------>MYB83<---------YAB1              --------->GLK1(1)   <-----------ARR10 <-----------GT1            ------>MYB46(1) <---------AHL20(2)      --------->RVE1(1)  <---------CCA1(2)   ttttttcctttttggttctttagtctcaccaaattacatattatttttaaataatctaacaattctccaaatatcctaaaaactaattcatatctctcca  19226300                                                --------->ZAT14                       ------>MYB83      ------->TEIL                       ------>MYB46(1)<---------YAB1                                           ------                    --------->ANAC46--------->YAB1              <-----------ARR10       <---------TOE1(2)           ------>ZmHOX2a(1)        <---------ICU4 --------->ANAC46                    ------>ZmHOX2a(1)          --------->TOE2(3)       --------->ARR11(3)           <---------CCA1(2)      --------->TOE2(3)   aatctaaaatttcctaaattccaccaaattttctaaaatcatgaatccaatacactccctgattcaaatctctccaaatctaaaatttcctaagttccac  19226400                                                                               --------->AtLEC2                                                                           --------->DOF5.7(2)                                                                          --------->TOE2(3)         -                                       <------NtERF2               --------->At4g35610             --                                <---------WRKY38(1)                <---------At4g35610             --                 --------->ANAC46     --------->LBD16     <---------ARR14(2) ---------->DOF2---------       ------->TEIL           --------->ANAC58           <------ZmHOX2a(1)<----------DOF2  ----------    <---------YAB1            --------->ANAC58  <---------YAB1  <------ZmHOX2a(1)          ---------- ----->RAV1(1)   <---------ALFIN1   <---------LBD16   <------ZmHOX2a(1)   <-------GAMYB  <-----------GT1   cagataatgaatccaatacacacccctaagagaggcaacgcggagatgtcattagaggaggaactaggaagcagagcgttaatgcaaaatgttaccaaaa  19226500           --------->GLK1(1)                                          <---------TOE1(2)          --------->ARR11(3)                                       --------->YAB1          <---------ARR11(3)                                      <<<<<<<<<ARR2        --------->ANAC58                                          --------------->AtSPL3        --------->ANAC58                                      ------------>CBF  ---------->DOF2            --------->ORA47(1)              --------->YAB1 -------->DOF5.7(2)      <---------ALFIN1                   <---------ATHB12 ------->TOE1(3)        --------->At4g35610                ------>MYB83 ------->TOE2(3)        <---------At4g35610                ------>MYB46(1) ------>AGL15   --------->At4g35610                       --------->WOX13(1) ------->AG--------->CCA1(2)--------->DEAR3(1)          ------------>CBF ------->AGL1   <---------At4g35610             ----------->GT1   <<<<<<<<<ARR1       <---------ARR11(3)   acgttaatgcaagatatcaactgatcagcaccgtccatttcaaactgagaatgtaaaaaccaatcacaatcgtacattttttcatctagttcttcgttct  19226600                  ----------->HVH21           <-----------GT1                --------->O2              --------->ARR11(3)              ------->GAMYB               <---------AHL20(1)                    --------->YAB1              <---------ALFIN1         --------->AHL20(2)                      <---------YAB1 -------             --------->MYB46(3)        <-----------TBP                       --------->RVE1(1)-------            ------>MYB83             <---------DAG2         --------->ARR11(3)--------->ARR11(3)  ---            ------>MYB46(1)          <----------DOF2        <---------ARR11(3)<---------ARR11(3)-----            -------->P    <----------DOF2----------->TBP---------->DOF2      --------->CCA1(1)-------   tggccacaacgtccaaccacatgacgctctttctactcactttatatattcccatctcaaaagttcttggagacacaaaatatcataaacatataaacgc  19226700                                                                   <---------AtMYB61                       <-------GAMYB                             <---------MYB46(3)                     <---------ANAC58                           <---------AtMYB61                     <---------ANAC58                           --------->ALFIN1       <---------DAG2<---------ANAC46                        <---------AtMYB61       <----------DOF2<---------MYB46(3)                     <-----------RAV1(1)             -------- --------->YAB1      <---------RAP2.6(2)                     <---------YAB1                  <------- -->ANAC46           <---------DEAR3(1)                 <---------ZAT6                      <-------- -->ANAC58    <---------ANAC58                      ------>ZmHOX2a(2)        --------->TOE2(3) ------>WOX13(1)<-----------RAV1(1)                <------ZmHOX2a(2) <-------GAMYB   <---------TOE2(3) ------->CBF  <---------ANAC58                    <---------ARR11(3)--------->MYB55(2)   <-------TEIL -->ANAC58  <-----------GT1------------>CBF       --------->ARR11(3)<---------MYB46(3)  <--------P   caattagaacttttttacttgtggcggtttacaatggagaaaggtttgaagcgatcttgtgttatggtggtggttgcattcttagccaaggttgatatct  19226800                            --------->ARR14(2)                            <---------ARR14(2)                         --------->ANAC46                       --------->MYB52(1)                      <---------REM1(2)                     <-----------HVH21                <---------ICU4             --------->YAB1 <---------GLK1(2)         <---------ANAC46<---------ANAC55(2)                                        -------->P         <---------ANAC58--------->ANAC55(2)                                     <---------MYB52(2)      --------->ARR14(2) --------->ANAC55(1)                                   --------->ZAT6      <---------ARR14(2) --------->ANAC58        <---------YAB1           <---------GLK1(2) ->ARR11(3) <-------TEIL<---------LBD16        <---------At4g35610       <---------At4g35610 --ARR11(3)<---------MYB52(1)      --------->At4g35610                   <---------ZAT2             - -GLK1(1)<---------ANAC58--------->ANAC58     <---------YAB1         --------->ANAC46             ---   cagtttcagttccgttcataatgcttcacggaatcgcatctcaatgttctgatgatacaaatgctaacttcacacagcttctcactaacctctctggctc  19226900         <---------ANAC58         <---------ANAC46                                          --------->REM1(2)         <---------ANAC58      ----------->GT1           <---------ARR14(2)         <---------AtLEC2--------->ANAC46                --------->ARR11(3)    <----------DOF2  <<<<<<<<<GATA-1                     --------->ARR14(2)   <---------ANAC58  <<<<<<<<<GATA-4                 ---------->DOF2   <---------ANAC58  <<<<<<<<<GATA-2               ------->GAMYB  --------->AtLEC2                 <- ----->ZmHOX2a(1)    <<<<<<<<<GATA-3         --------->YAB1------>ZmHOX2a(2)   <---------ANAC46    <- -------->RAV1(2)  --------->WOX13(1)       <---------YAB1<------ZmHOX2a(2)  <---------ANAC46      <-   tcctggcttttgcttgtaagtcaatccacaaaatagtttattcgttttgataaccgaaagatcgggccatgtagaagagttgtgtattcttgctatataa  19227000                                                                  <---------GLK1(2)    ---------->DOF2                                           <---------At4g35610 --------->AtLEC2                                       <<<<<<<<<<MYB80 --------ANAC58                                        <------MYB83<---------YAB1 --------ANAC58                                        <------MYB46(1) --------ANAC46   <---------YAB1                   ------->TEIL------>ZmHOX2a(2)                -----   gacgtgcaaagtgactacttatttttgttttatatagcatgaacaagatgatgtatttggtttgatctgattcttgttttttttttggtaatggaatcca  19227100                               <---------ANAC58                ------->MYC3                   <---------AHL20(1)            --------->ANAC58                   --------->AHL20(1)            --------->ANAC58    --------->GLK1(2)                   --------->AHL20(2)       --------->ANAC46<---------ANAC58                     <---                   <---------AHL20(2)     --------->ANAC46  <---------ANAC58                  ------- ---->LBD16  ----------->GT1   <---------ANAC58---------->DOF2 <-------MYC3        ---------->DOF2   gagaaattggaaatggagtaataaattcaatgttcttgccacttacacaacaagcagaaatagcatgtgagaatgtgaaggaaatgaaagagttgagtca  19227200  Previous    Next  AGI:  At5g47340.1    Description:  palmitoyl protein thioesterase family protein. similar to palmitoyl protein thioesterase family protein [Arabidopsis thaliana] (TAIR:AT5G47330.1); similar to palmitoyl protein thioesterase family protein [Brassica oleracea] (GB:ABD64963.1); contains InterPro domain Palmitoyl protein thioesterase; (InterPro:IPR002472) Range:  from: 19226734    to: 19228361    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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