Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      ----------->RAV1(1)                                   --------->bZIP60(2)                                 --------->ANAC58                    <---------ICU4       <---------TGA1a                                 --------->ANAC46                   --------->ICU4        --------->TGA1a                                 --------->RAP2.6(2)            ------>ZmHOX2a(1)         <---------O2                                 --------->ANAC58              --------->TOE2(3)          --------->ANAC58                               ------>NtERF2           ---------->ID1--------->YAB1       --------->O2     XXXXXXXXXXXXXXXXXXXX>MIR830--------->SPL7        <---------ANAC46                    --------->ANAC55(2) ---------->HVH21             ----------->HVH21       <------MYB83  <---------ATHB12      =========== -------At4g35610             <---------SPL7          <------MYB46(1)<--------ATHB1       --------->ANAC46 -------ZAT2                --------->At4g35610       <---------ANAC58                    --------->ANAC58 ------>At4g35610           <---------At4g35610       <---------ANAC58                    <---------ANAC55(2) ------>ZAT2             --------->LBD16             --------->MYB46(2)              --------->ANAC58 -------->RAV1(2)  <---------HSFB2a(1)               <---------MYB46(3)              --------->ANAC46 --->SPL7          --------->HSFB2a(1)               --------->MYB111(1)           ---------->DOF2 --TEIL            <---------HSFC1(2)              <---------MYB52(1)--------->ATHB12--------->ANAC58 --SPL7            --------->HSFC1(2)    <-------TEIL<---------AtMYB61             =================bZIP_DOF   agctgaagcattctgagaagaagcatcccgagcggacgcaacatccattaactgtttggtgttttcctcaatgatttcgacttgtgaaagccacgtagcc  19205600                         --------->At4g35610                         <---------At4g35610                  ------>MYB46(1)                  ------>MYB83                --------->AtMYB61                <---------ALFIN1               --------->MYB46(3)             <---------WRKY18(1)            --------->WRKY38(1)            --------->WRKY45            --------->WRKY12           --------->DOF5.7(2)           <---------MYB52(1)          --------->At4g35610                        --------->ARR11(3)            --------->ANAC58         <---------MYB46(3)                          <---------ARR11(3)  <---------At4g35610     ----   --------->STY1(2)  ---------->DOF2--------->WRKY38(1)   <----------DOF2       ---------->DOF2 ---- ================================bZIP_DOF      <-----------GT1      <----------DOF2--------->ANAC58   actatagctagccgttgaccacccttaagctcaccagcattgactctgtttacaacatcttctttttctgctttaagctcatcaaaagcactcttcaaca  19205700                                                                                         --------->MYB46(3)                                                                                       ----------->RAV1(1)                                         --------->ANAC46                           ------>MYB46(1)                  --------->ANAC58       --------->ANAC58                           ------>MYB83    <---------ARR14(3)          ------>MYB46(1)                                   <---------MYB111(1)    --------->ARR14(2)          ------>MYB83 --------->ANAC58                    ----------->RAV1(2)    <---------GLK1(2)          <---------ALFIN1                                 -------->P------->GAMYB    --------->ARR11(3)        --------->MYB46(3)                                --------->MYB52(1)    <---------ARR11(3)        <---------MYB59--------->ANAC46                  ------->GAMYB    --------->ARR14(3)     <-----------GT1   --------->ANAC58                 --------->MYB46(3)  ----------->ARR10    <-----------ARR10 --------->ANAC58         <-----------GT1==================RAV ----->ANAC58     --------->AtLEC2 <----------DOF2   ---------->DOF2          <---------MYB46(2) ----->ANAC58     --------->ANAC58<---------DAG2 <----------ID1--------->YAB1 <---------MYB111(2)----   agacaagattttccttcaacatgcaaatgttacccacctttacacacaagtaagacaaagcagacttataacatggctcaactacctgccaacagcaatt  19205800                                                       ======================HOX2a_HOX2a                                                       ------>ZmHOX2a(2)                                                      =======================HOX2a_HOX2a                                                      <------ZmHOX2a(2)                                                     <---------ARR11(3)                                                     --------->ARR14(2)                                                     <---------ARR14(2)                                                     <-----------ARR10            <---------LBD16                                                     --------->AGP1              <---------LBD16                                                     --------->ARR11(3)        --------->ARR14(2)        <---------YAB1                               <---------AGP1            <---------ARR14(2) ----->ATHB12   ---------->DOF2             --------->AHL20(2)        <------ZmHOX2a(1)----------->GT1   cattgtgctcaagattgagaaagagaactaagatgagagtagcaaatttaaaacagatctttgtacagaacaggatgtctgaatcgggggagtagaaata  19205900                                                                                      --------->MYB52(1)                                                                                    --------->AHL20(1)                                                                                 >>>>>>>>>>GT-3b                                                                         ---------->DOF2           --                                                                        *TSS  ----------->GT1  ------                  <------ZmHOX2a(1)                                    <---------YAB1<---------ATHB51               <---------AtLEC2                                     --------->ICU4 --------->YAB1<---         <----------DOF2                ---------->DOF2           <---------At4g35610<---------AHL20(2)   gggaaacagaactttgtgcaggacgaactagagagaccagagaaaaggaagagaccagagaaatggagagatgatgaaagaagaaaaataatggagagag  19206000                                                    --------->ANAC58                                                    --------->ANAC46                                                    --------->ANAC58                                                   <---------LBD16                                                 ------>NtERF2                                             --------->ANAC58                                             --------->ANAC46                                             --------->ANAC58                                            ------>MYB46(1)                                            ------>MYB83                                     --------                                            -------->P                                     ----------                                            --------->SPL7                         --------->YAB1----         ----------->GT1                   <---------ALFIN1                        <---------ICU4----   --------->ARR11(3)<---------ANAC46 --------->ARR11(3)                          <---------ATHB12 -------->DOF2 --------->DAG2         <---------ARR11(3)   <---------REM1(1)      --------->ICU4 <--- ------------------>ANAC81            <-----------GT1--------->LBD16            --------->YAB1 <----- ---ZmHOX2a(1)---------->DOF2   <----------DOF2 <---------ALFIN1   <---------AHL20(2)<---------YAB1<-   gaaaagaactagagaaaaaagttatgtggaatgcctttaatatccctaccccacccgcatgttgtagaattttttgtaacaacaatgatgactaaaaggt  19206100                                                                                           <------MYB83                                                                                           <------MYB46(1)                                                                                          <---------AtMYB61                                                                                          <---------MYB46(3)                                                                                          --------->MYB111(1)                                                                    ------->MYC3          --------->MYB46(2)                      --------->TOE2(3)                             ------->MYC4        <---------ANAC46                   --------->MYB52(1)                               ------->MYC2   --------->O2                <------MYB46(1)                                     <-------MYC3   <---------O2                <------MYB83                                   ----------->RAV1(1) <---------TGA1a                <---------ANAC55(2)                         --------->ANAC58       <---------ANAC58                --------->ANAC55(2)                         <---------ANAC55(2)    <---------ANAC46               --------->MYB111(2)                          --------->ANAC58<---------AHL20(1)    <--               --------->MYB59                              --------->ANAC55(2)    <---------bZIP60(2) ->DAG2    <---------AtMYB61   <-------TEIL                 --------->ANAC55(1)    <---------ANAC58 >DOF2   <-----------RAV1(1)<---------MYB46(3)              --------->ANAC46--------->ARR11(3)    --- ----->ZAT18   --------->MYB111(1)  --------->ATHB12  --------->AHL20(2)    <---------ARR11(3)    --- ----->ZAT14   --------->MYB46(2) <---------WOX13(1)  <---------YAB1<-------MYC2  ----------->STF1<-- ------ZAT14  <---------MYB55(1)--------->ATHB12      <---------AHL20(2)    --------->AHL20(1)<------ ----------AtSPL8  <---------DOF5.7(2)<---------WOX13(1)  <-----------GT1 ----------->ARR10<---------ANAC58 --------ZAT14<--------P--------->ATHB12<-----------GT1<---------ICU4     <---------TOE2(3)<---------ANAC58   gtactgtgtctgtgtggtaggtaacgttattggttcattgatttacaaatccatatataattacgcaacatgtgctaagatattgacgtggtttggtgtc  19206200                              --------->AHL20(2)                              <---------AHL20(1)                              --------->AHL20(1)                              <---------AHL20(2)    <----------ID1         --------->YAB1                              <---------MYB46(3) -------At4g35610        <---------WOX13(1)                           <--------P   --------->AHL20(2) ------>At4g35610 --------->ZAT18                                  <---------TOE2(3)           ------ ------>ZAT2      --------->ZAT14                                  <---------YAB1  <---------AHL20(2) -------ZAT2      <---------ZAT14                              --------->AHL20(2) --------->AHL20(2) -----HVH21    <---------MYB46(3) <-------TEIL                 --------->YAB1 <---------AHL20(2)   agctaagagacaaatattggttcactgattaataaattcatatgggtttgaactcatacatagaataatatggttgttcttaaatttaaaaacatccaca  19206300                                                               ------->MYC3                                                               <-------MYC3                                                           <---------ATHB12                                                          ------>MYB83                                                          ------>MYB46(1)                                                          -------->P   --------->ANAC58                                                         --------->MYB55(1)                                                        --------->AtMYB61                                                        --------->MYB46(3)                                                        <---------MYB46(2)                                                        <---------MYB55(2)                                                        <---------MYB111(2)                            ---------->DOF2             --------->DEAR3(1)         ------------>CBF                  <---------ICU4                        <---------MYB111(1)----------->GT1 <-----------RAV1(2)     --------->MYB52(1)            --------->MYB46(3)---------->DOF2  --------->GLK1(1) --->ANAC46       --------->YAB1--------->YAB1      --------->ZAT18    --------->ANAC58   <---------GLK1(1)   aaaccaggttagacaaacaaaaatgactaacaaagcataaacgaatactatatgtccaccaaccatatgcaaaacgaaagaaaaaaacaatgaaatccat  19206400                                               --------->ANAC58                                               --------->O2                                               --------->ANAC55(2)                                               <---------O2                            =============================bZIP_DOF                      <------ZmHOX2a(2)        --------->bZIP60(2)                      --------->CCA1(2)        <---------TGA1a                     <---------ARR11(3)        --------->TGA1a                     --------->ARR11(3)        --------->ANAC55(1)                     --------->ARR14(2)        --------->ANAC58                     --------->AGP1            <---------ANAC55(2)                               ----                     <---------ARR14(2)   --------->ANAC58                       --------->AHL20(2)                 ---------->DOF2          --------->ANAC46 ------->MYC3          <---------AHL20(2)            <---------AHL20(2)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <---------AHL20(2)           --------->AHL20(2)     ----------------------->TaNAC69(2)            --------->AHL20(2)     <---------ARR11(3)     ---------->DOF2    --------->ANAC46                 <---------AHL20(1)     --------->ARR11(3)   --------->ANAC46--------->ANAC58 <-------MYC3         --------->AHL20(1) ---------->DOF2 ========================================bZIP_DOF --------->AHL20(2)        ---------   gaataaagatttataaaatgaaagatccacaaaagtatcaccacaagccacgtaactcccatatgcattaaaacatatcaaatttaatttcaaatagtaa  19206500  Previous    Next  AGI:  At5g47250.1    Description:  disease resistance protein (CC-NBS-LRR class), putative. Identical to Probable disease resistance protein At5g47250 [Arabidopsis Thaliana] (GB:Q9LVT4;GB:Q0WVJ2); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G12280.1); similar to RFL1 [Arabidopsis lyrata] (GB:AAL65637.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 19203021    to: 19205972    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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