Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            ------>MYB83                                                                          ------>MYB46(1)                                                                        --------->AtMYB61                                                                        <---------ALFIN1                                                                       --------->MYB46(3)                                                                  --------->ANAC58                                  <---------ANAC46                --------->ANAC46                                  <---------ANAC58                --------->ANAC58                            <---------YAB1                      <---------ICU4                      <---------ZAT18        --------------->AtSPL8   ------>NtERF2         ---------                      --------->ZAT18     <---------DAG2        --------->YAB1         <---------ARR14(2)        --------------------->WRI1<---------ANAC58            --------->ARR11(3)       --------->ARR14(2)  <---------DAG2   <---------ANAC58       <----------DOF2--------->AHL20(2)           <---------CCA1(2)  <----------DOF2  <---------ANAC58    <-----------GT1   <---------AHL20(2)  ------>ZmHOX2a(1)   <---   attcctttttccctgcatttttcgttcactatttttgcttataactttttgtactaaaattaaaaatcatgccaccatcctgtatttcatatccaaaagc  19200400                         <---------ANAC46                         <---------ANAC58                   --------->ATHB12                  <---------YAB1               --------->AHL20(1)               <---------AHL20(1)       <---------ICU4               <---------AHL20(2)  <---------WOX13(1)            --------->AHL20(2)   --------->ATHB12  <---------ARR11(3)           ------>MYB46(1)           <---------YAB1<---------ANAC58          --------->ARR11(3)           ------>MYB83 ->DOF2 <---------AHL20(2)      <---------YAB1     --------->GLK1(2)       --------->ZAT6<---------AHL20(2) -------DOF2--------->YAB1<----------DOF2  <-----------GT1        <----------DOF2        --------->AHL20(2)   tttggattattttataatatatcattggcttgatgtgattgatatttaccaaaaatctattctagtttctttttgtaacaccaaatgttatttaaaattt  19200500                                                                                                   --                                                                                                -----                                                                                                -----                                                                                                <----                  --------->AHL20(2)                                    <---------AHL20(2)      -----             <-------TEIL        <-----------GT1                       <---------YAB1           -----          -------->HAHB4        <---------CCA1(2)                   --------->ICU4       --------->ANAC46          --------->ATHB12     <---------AHL20(2)       --------->ARR11(3)      ---------->DOF2 -----         --------->ICU4       --------->YAB1            <---------ARR11(3)  --------->YAB1      <----         <---------YAB1      <---------YAB1           <---------AHL20(2)--------->AHL20(2) --------->ANAC46 ----------->GT1  <---------AHL20(2)            ----------->GT1     <---------YAB1   --------->CCA1(2)   gtattggaaaaatgattcatttatataagttattatatccctcttaaaaattgtataaaatctctaagacattattaattgtaaaagatagacacaacac  19200600                                                                           ----------->GT1<-------GAMYB                                                          ------->TEIL   <-------GAMYB    ===========                                ------->TEIL          <---------------AtSPL3             <------MYB46(1)                             --------->ANAC55(1)      <---------------AtSPL8             <---------MYB46(3) ----->TEIL                  --------->ANAC58         --------------->AtSPL8             <------MYB83 ---->ANAC58                 --------->ANAC46      <---------AHL20(2)  <---------TOE1(3) <---------DEAR3(2) ---->ANAC55(1)              --------->ANAC58  --------->YAB1       <---------YAB1     <---------ORA47(1) -----O2                     <---------ANAC55(2)  --------->YAB1 <---------AHL20(2)  <------MYB83 ---->ANAC58                 --------->ANAC55(2) <---------YAB1  <---------YAB1      <------MYB46(1) ---->ANAC55(2)        --------->AHL20(2)     <---------YAB1  --------->AHL20(1)--------->ICU4 ---->ANAC46<---------CCA1(2)<---------O2    --------->AHL20(2)  --------->AHL20(2) --------->MYB59 -----ANAC55(2)     --------->YAB1     --------->ANAC55(2)<-------TEIL <---------TOE2(3)<---------DEAR3(1)   gtagctatatgtctatatccaaaaataaaacacgtagctatatgtaatattataaaaatgtacatatattattagggttgtaatatttggtcggttgaaa  19200700                           <-------MYC2                           <-------MYC3                           ------->MYC3                           ------->MYC2             <---------RVE1(1)                          <---------O2              <---------CCA1(1)                          --------->O2             <---------AHL20(1)                          --------->ANAC55(2)      --------->ARR11(3)                          <---------ANAC46         <---------ARR11(3)                          <---------ANAC55(2)      --------->AHL20(1)                          ========================bZIP_DOF         <---------At4g35610               <------------CBF                                   <------         --------->At4g35610           <----------DOF2                          <-----------GT1 -----         <---------ZAT2   --------->TGA1a --------->ATHB12             <----------DOF2     <---------ANAC55(2)         --------->ZAT2   <---------TGA1a<---------YAB1            ---------->ID1   <---------CCA1(2) ===================================MYC_MYB>>>>>>>>>ARR2<---------AHL20(2)  <----------DOF2--------->ANAC55(2)   attgaaatcgcagctcaattggaaattcacgtgtattttgtctttgattgtaagatattaaaactgttcttcgctttccttttctcatttctcacttaac  19200800                  <---------ALFIN1             <-----------GT1      <---------ALFIN1                     --------->ARR11(3)    <------ZmHOX2a(2)                      --------->GLK1(2)   <---------ARR14(2)        --------->ALFIN1    --------->ZAT6   --------->ARR14(2)       *TSS           <---------ARR11(3) -----GT1<----------DOF2 <---------YAB1   --------->RVE1(1)              <----------DOF2 ---->MYB46(3)  --------->AtMYB61       --------->AHL20(2)     <---------ALFIN1                  <---   cactcgatccactttaaaccacacattataagtgtgcctcaaaaaaatctaacattactctctcaacacatctctctttcttctccatttccttcttctc  19200900                                                                       <----------DOF2                          --------->At4g35610                         --------------->AGL15                          <---------At4g35610                         <---------------AGL15        <-                      --------->ARR14(2)                             ----------------->AGL1  ========                   --------->AHL20(2)                                ----------------->AG    ========                   <---------AHL20(2)                             <---------GLK1(1)          ------>ZmHOX2a(1)                 --------->CCA1(2)                                --------->GLK1(1)    ==============                --------->ARR11(3)                           <-----------GT1           ==============                <---------ARR11(3) <---------ANAC58      <----------DOF2               ------>ZmHOX2a(1)              <---------TOE1(3)    <---------ANAC58   --------->ARR11(3)           --------->ARR11(3) -------DOF2  <---------TOE2(3)    <---------ANAC46   <---------ARR11(3)           <---------ARR11(3)   tttcattctcttatttaagatttaaatctgctcaaatgcttgtaaacaaatttcaagttctttaaacgatttccttttcaagaaaaatccttctccttct  19201000                        ------>ZmHOX2a(2)               ------>ZmHOX2a(2)             <---------ARR11(3)             <---------AGP1             --------->AGP1             <---------ARR14(2)             --------->ARR14(2)             --------->ARR11(3)            <---------CCA1(2)           ----------->ARR10   <-----------GT1    <---------ARR11(3) ---------DOF2<------ZmHOX2a(2)              <----------DOF2     ---------->DOF2 ====================HOX2a_HOX2a  --------->GLK1(2)            <---------YAB1 =====================HOX2a_HOX2a--------->ARR14(2)   <---------ARR14(2) ====================HOX2a_HOX2a <---------GLK1(2) <---------TOE1(3) =====================HOX2a_HOX2a<---------ARR14(2)<---------TOE2(3)     ----------->RAV1(1)   tctttttaccacatagatcttcttgatctacaatggattctgtttctctttctgaggttactgtcattaaaggaacaacacatttgggttttatgcacag  19201100                                                                                                  ---                           --------->ARR11(3)                                                   -----                           <---------ARR11(3)                      --------->TOE1(3)            -----                          --------->CCA1(1)                   <-----------GT1                   -----                          --------->RVE1(1)                <---------ICU4                       <----                  <---------bZIP60(1)                      --------->YAB1  <-----------GT1      <----                  <---------ANAC46                        <---------AHL20(2)      ------>ZmHOX2a(1) <                  ----------->GT1---------->DOF2    ----------->GT1--------->TOE2(3)           <-----   tttcagacagccattttgtggtgtcaaaatatctccaaagttctatttatccaaaggtaaataataacaccttaaaatcacttcctcttcacaacaagaa  19201200        <----------DOF2                                                --------->ARR14(3) --------->ATHB12                                                      --------->ARR11(3) ------>YAB1                                                           <---------ARR14(3) ---->GLK1(2)                                                          <---------ARR14(2) ---->ARR11(3)                                                         <---------ARR11(3)    -------- ---->ARR14(2)                                                         --------->ARR14(2)---------->DOF2 -----ARR11(3)                                                   --------->ANAC58   ----------->RAV1(1) -----ARR14(2)                       <----------DOF2             --------->ANAC58 --------->At4g35610 ---------YAB1        <------------------------ANAC81         ---------->DOF2--------->HSFB2a(2) ----GLK1(2)         <------------------------ANAC81    <---------WOX13(1)   <---------HSFB2a(2)   tcttcattgtcttttttaaaaattgtttttttttttttgcattttggacgagaagttgatggaccaaaggcaatatcttcgagcagcaacacaaagagtc  19201300  Previous    Next  AGI:  At5g47240.1    Description:  ATNUDT8 (Arabidopsis thaliana Nudix hydrolase homolog 8); hydrolase. Identical to Nudix hydrolase 8 (NUDT8) [Arabidopsis Thaliana] (GB:Q8L7W2;GB:Q8LAJ0;GB:Q9LVT5); similar to ATNUDT2 (Arabidopsis thaliana Nudix hydrolase homolog 2), ADP-ribose diphosphatase/ NAD binding / hydrolase [Arabidopsis thaliana] (TAIR:AT5G47650.1); similar to hydrolase, NUDIX family protein [Brassica oleracea] (GB:ABD64957.1); contains InterPro domain Anti-sense to fibroblast growth factor protein GFG (InterPro:IPR003293); contains InterPro domain NUDIX hydrolase, core; (InterPro:IPR000086); contains InterPro domain NUDIX; (InterPro:IPR015797) Range:  from: 19200828    to: 19202871    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version