Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->AHL20(2)                                                                            --------->YAB1                                                                           <---------ATHB51                                                                      --------->ANAC58                                                               --------->ANAC58                  <---                                                               --------->ANAC58                  <---                                                               --------->ANAC46          --------->MYB46(3)                                  --------->DAG2               --------->DAG2          --------->ANAC58           ----------->GT1       ---------->DOF2              ---------->DOF2       ------>ZmHOX2a(1)         ---------->DOF2 --------->ANAC58          <------ZmHOX2a(1)  --------->ANAC58 --------->ANAC46      <---------YAB1     --------->ANAC58    <---------WRKY38(1)      --------->ANAC46 --------->ANAC58 -------DOF2             --------->ANAC46   <<<<<<<<<WRKY6 --------->YAB1  <---------ATHB12  --------   tttggaatatgaaaagaaaaaacaaacaaggaagaaaaagtctatagtcaacaggaaggaaccataaggcacaagcaataatattcctccagccatcatc  19161500                                               <---------YAB1                                             <---------GLK1(1)                                             --------->GLK1(1)                                            --------->ARR11(3)                                            <---------ARR11(3)                                          <---------TOE2(3)                                     -------->ATHB1                                     --------->ATHB12                                     --------->ATHB51                                    --------->ICU4                                              -----                                    --------->AHL20(2)             ----------->GT1 <---------------AGL15                                    <---------AHL20(2)       <---------AHL20(2)    --------------->AGL15                                    <---------ATHB51         --------->AHL20(2)    ==================                                 --------->AHL20(2)      --------->AHL20(2)   --------->AHL20(1)<----  <----------DOF2                <---------AHL20(2)      <---------AHL20(2)   <---------AHL20(1)<---- --------TGA1                    --------->AHL20(1)      <---------AHL20(1)--------->YAB1       ----- --------HVH21                  <---------AHL20(2)       --------->AHL20(1)--------->AHL20(2)  ------ ->YAB1  --------->MYB46(3)     --------->AHL20(2)    --------->WOX13(1)--------->YAB1    -----------   gtcactttctaaccattagaagtttttctctaaattaaattattgagatatcatttcaattaattaaaaatgtataataatatttttaaaaatggaaata  19161600                                                                              <---------AHL20(1)                                                                              --------->AHL20(2)                                                                              --------->AHL20(1)  <---------YAB1                                           --------------->AGL15              ------- ---->AHL20(2)                                             ========================================== ==========================================================================MADS_MADS<---------ANAC46 -----AHL20(2)       <------MYB46(1)           <---------YAB1                 <---------AHL20(2) -----AHL20(1)       <------MYB83             <---------AHL20(2)              --------->ARR11(3)    < ---->AHL20(1)      <---------AtMYB61         --------->AHL20(2)              <---------ARR11(3)    - --->AHL20(2)   <---------LBD16 <-------MYC3 --------->AHL20(2)         --------->TOE2(3)     <------ >GT1  ---------->DOF2          ------->MYC3 --------->YAB1<---------------AGL15 <---------AHL20(2)<-   aattatgctcaaagcatttggggaggtttagacacatggaaacacaattaaaatagaatagctaatattagttaacttaatatattatgtgtaatagtgt  19161700               -------->P               --------->ANAC55(2)           --------->TOE2(3)           <---------TOE1(3)                                            - <---------AHL20(2)              <---------------AGL15                                              - ---->GT1 --------->REM1(1)    <-----------GT1                               <---------YAB1        -- ================================================MADS_MADS     --------->TOE2(3)         --------->AHL20(2) ---------AHL20(2)    ----------->GT1  <---------TOE2(3)     <---------ARR11(3)          <---------AHL20(2) -------->AHL20(2)   <---------WOX13(1)--------->MYB59       --------->ARR11(3)         --------->AHL20(2) ---ZAT6------>ZmHOX2a(1)    --------->AHL20(2)   <---------AHL20(2)         <---------ATHB12     --- --------YAB1 --------->WOX13(1)<-----------------AG         --------->GLK1(2)--------->YAB1  <------   tattaatttcctacatcaaccagattgaaaaataaacattttaggtaactaagtaatttgaaaaatctaaatctaagtaatcatacaaaaattaatatga  19161800                                 <---------AHL20(2)        ---------->DOF2          <-----------GT1   ---------->DOF2  <---------ZAT2 -------->ANAC58    --------->At4g35610 -------->ANAC58    --------->ZAT2    >>>>>>>>>>>>>>>>>LFY                 --------->ZAT6 ------->DAG2       <---------At4g35610  <------------CBF             --------->TOE2(3)       <------ ------->DOF2    <------ZmHOX2a(1)  <----------DOF2             <---------ICU4        <---------ATHB12 ---YAB1--------->MYB52(1)  --------->AHL20(1)                *TSS <-----------GT1  --------->WOX13(1)   aaaagcaaagtaaaggagaggaagctgaaacatattaactttccattgtatacaaatacaaaaccatttttacattaacacaaaaacaatcagtctcttt  19161900        --------->REM1(1)     --------->TOE2(3)                                          ------>ZmHOX2a(1)     --------->TOE1(3)                <----------DOF2      <---------GLK1(2) ----DOF2                          ---------->ID1    <---------MYB46(3)                <----------DOF2   ctctaaaccttcaccaatttctctctctctctctcttgcccttttacacagccatttgttagattcctctctcaataagcctctcttctcttttctattg  19162000                                                           <------------------------ANAC81                                              --------->ARR11(3)                                              <---------ARR14(3)                                              <---------ARR11(3)                          --------->ANAC58    --------->ARR14(3)                          --------->ANAC58    --------->ARR14(2)                        ---------->DOF2       --------->GLK1(2)                           <----------DOF2                    --------->At4g35610       <-----------ARR10                     <---------DAG2 <-               --------->ATHB12       ---------->DOF2 <----------DOF2  <-----------GT1 <-----------GT1   gagtttttgcattagactgattagctcaaagcaaaacccataaaccaaaatcttctctttgtgttcttgtttttttcatttctccaatttttctttgtgg  19162100                                             <---------HSFB2a(2)                            ---------                                      <----------DOF2       <---------DAG2                  ---------           <---------DAG2            <---------ANAC58       <----------DOF2                 <--------           <----------DOF2     --------->ATHB12       --------->YAB1  <---------LBD16       ---------        <-----------GT1       <---------YAB1 --------->HSFB2a(2)  <---------AHL20(2)        <--------      <-----------GT1         <---------AHL20(2)      --------->TOE2(3)               ---------->DOF2 -----ZmHOX2a(1)      <---------LBD16<---------ANAC58 --------->TOE1(3)          --------------->AGL15   aggaggtttttcactttttgtttttctgggtttttattggctttcttctgcaaaaaccataactttattttttctgggtttttcttcgtaaagaagcttc  19162200                                                                                 <---------ANAC58                                                   --------->TOE1(3)           <---------YAB1                                                   --------->YAB1             <---------GLK1(2)                                                   --------->TOE2(3)    --------->RVE1(1) >HSFC1(2)                                        <<<<<<<<<ARR1        <---------ARR11(3) >HSFB2a(1)                                       <<<<<<<<<ARR2        --------->GLK1(2) -HSFB2a(1)                            --------->ANAC58                --------->ARR11(3) >At4g35610                            --------->ANAC58               <---------GLK1(2) -HSFC1(2)          --------->At4g35610----------->GT1           <-----------GT1 <---------ANAC58   ccaaaacccagttttttgtataagctcaattagtagcaaacaagaaaaaacaatcttaaactcaatttcacaaaatctctgattcttgtgaaaatttgta  19162300                                               <---------ANAC58                                --------->ALFIN1------>ZmHOX2a(1)                      ----------->GT1          <---------ANAC58                               <------MYB46(1)                      <----------ID1  --------->ANAC58      --------->ALFIN1             --------->ATHB12                  ---------->DOF2     --------->ANAC58<---------YAB1        --------->ARR11(3)<------MYB83           ----------->GT1 ---------->DOF2  <---------ARR11(3) ----------->GT1        <----------DOF2   tattgcaaaactttggaaaaaaaagagaaaaaagatggggaagcaaggtccttgctatcactgtggagttacaagtgagttcttgtttctttgatttggt  19162400  Previous    Next  AGI:  At5g47140.1    Description:  zinc finger (GATA type) family protein. Identical to GATA transcription factor 29 [Arabidopsis Thaliana] (GB:Q5PP38;GB:Q9LTB5); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT4G17570.1); similar to GATA zinc finger containing protein [Brassica oleracea] (GB:ABD65042.1); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) Range:  from: 19161862    to: 19164716    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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