Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             ---------->DOF2                                                      --------->ARR14(2)        --------->YAB1                                                     -------->P    ------>ZmHOX2a(1)                                                   <---------MYB59 ------>HSFC1(2)                                                        ------>ZmHOX2a(2) -------HSFB2a(1)                             <---------ZAT14          <------ZmHOX2a(2) -------HSFC1(2)                              --------->ZAT14         <---------ARR14(2)            < ------>HSFB2a(1)                           <---------------AtSPL3    <---------AGP1         -------- ------ARR14(2)                           --------->GLK1(2)           --------->ARR11(3)     -------- ----->ARR14(2)                           --------->ARR14(2)          --------->ARR14(2)     <------- ----->GLK1(2)                            <---------ARR14(2)          <-----------ARR10      -------- ------ARR11(3)                          <---------GLK1(2)       ---------->DOF2<---------ARR14(2)--- --------ARR10                --------->ANAC55(2)  --------->ZAT14    <---------ARR11(3)    <-------- -----GLK1(2)                 <---------ANAC55(2)  <---------ZAT14   <------ZmHOX2a(1) --------->MYB52(1)   atcttcctaataacaaagcatagacatatatcaagtattcaaagaatctgtactgaactgaagttttaaaaggatctaaccagaaacgataacagaatcc  19152100                                  ------>ZmHOX2a(2)                                 <------ZmHOX2a(2)   --------->O2                                --------->ARR14(2)   <---------O2       <-----------GT1          <---------ARR14(2)   --------->TGA1a ---------ATHB12               --------->At4g35610  ------>MYB83 ->ARR14(2)       --------->HSFB2a(2)               ------>MYB46(1) ->GLK1(2)        --------->HSFC1(1)               <---------ALFIN1 --ARR14(2)       <---------HSFC1(1)              ------->GAMYB            <---------At5g28300 ->GLK1(1)    <----------DOF2  <---------At4g35610=============MYC_MYB<---------AHL20(2) ------>WOX13(1)  <---------HSFB2a(2)<---------TOE1(2)         <---------YAB1       --------->ZAT14 -GLK1(2)     =================================================bZIP_DOF   <-----------GT1    <-------   caatcagttttgccatctttctcgaactgtttcagatcccaagttccattaacccacttcgcattctgatatttgattaccgtctcagtactcgaatcag  19152200                        --------->HSFB2a(2)                 <------NtERF2                 --------->RAP2.3(1)                 --------->DEAR4(2)                 --------->ATERF1(1)                --------->ABI4(2)                <---------RAP2.3(1)                ------>NtERF2               --------->DEAR3(1)               <---------DEAR3(1)              <---------ABI4(2)              --------->ATERF1(1)              --------->RAP2.3(1)             ------->GAMYB<---------At4g35610             <---------RAP2.3(1)             <---------ATERF1(1)            <---------At4g35610            --------->ANAC46           <----------DOF2            <---------DEAR3(1)   --------->ALFIN1                           ----------->RAV1(1)   --------->REM1(1)    <---------HSFB2a(2) --------->At4g35610     ------>ZmHOX2a(1)   <---------ALFIN1 <---------MYB52(1)<---------HSFB2a(1)      <---------HSFB2a(1)             ------ <----------DOF2<---------ATERF1(1)  --------->At4g35610       --------->HSFB2a(1)            <------ <-----------HVH21<---------ANAC46 <------ZmHOX2a(1)         --------->ARR14(2)               ------- --ATHB12 --------->MYB52(1) --------->At4g35610       <-----------GT1 --------->ZAT14    <---------LBD16   tcgcttcacctccaacggcgccgttttcagaagcggaggagctttcggctggagatttaactggaacttcctctacagccacagaagcaggcttcggaat  19152300                                                                                          ------>ZmHOX2a(2)                                                                                         <------ZmHOX2a(2)                                                                                        --------->ARR14(2)                            <------NtERF2                                               --------->ARR11(3)     <---------ANAC46     --------->ETT(1)                                              --------->ARR14(3)  --------->ANAC46      <-----------HVH21                         <---------ANAC46      --------->AGP1  ----------->HVH21    <-----------RAV1(1)  <---------ANAC46      <------MYB83          <---------ARR14(3) --->ARR14(2)   <---------SPL7     --------->ARR11(3)             <------MYB46(1)       <---------ARR11(3) ---GLK1(2)    <---------ANAC58   --------->At4g35610            <---------MYB46(3)     <---------ARR14(2) -->ARR14(2)   <---------ANAC58<------ZmHOX2a(1)                 --------->MYB55(2)   ----------->ARR10   ctccacgacgggggaagtcgtaccattgtcggaggaagctctagggacggagattagagagaaacgcttggtggagagaagagaggttgagatcttgggg  19152400                                            --------->ANAC46                                            --------->ANAC58                                          <-----------GT1                                <---------ANAC46                                <---------DEAR3(1)                               --------->At4g35610                               <---------LBD16                             <---------DEAR3(1)                             ------>ZmHOX2a(2)                           <---------ARR14(2)                           --------->ARR14(2)                               ------>ZmHOX2a(2)                     ==============HOX2a_HOX2a                             <------ZmHOX2a(2)                     ===============HOX2a_HOX2a                            --------->GLK1(1)                     <------ZmHOX2a(1)    --------->MYB52(1)               <---------GLK1(1)                 --------->ALFIN1 <------NtERF2                           --------->ARR11(3)               <---------TGA1a <---------------------WRI1                 <---------AGP1             <---------ZAT14<------ZmHOX2a(2)        --------->CCA1(2)    <---------ARR11(3)       <-      <---------TOE2(3)   <---------GLK1(1) --------->ANAC58   <---------AHL20(2)              <xxxxx   atgagattagggttctgaagtgaggaagagatcggcggagagaataacgccatggatatagacatttttttgttaagatctctctctctctctctctctc  19152500                     --------->ZAT14                     <---------ZAT14             <---------GLK1(1)            <---------ARR11(3)                                    <---------ANAC46            --------->ARR14(2)                                  <---------MYB46(3)   ---------->ID1 ------>ZmHOX2a(1)                            <---------AtMYB61                 ---- ---------DOF2------>ZmHOX2a(2)                <---------ZAT6--------->ALFIN1              ---------- xxxxxxxxxxxxxxxxsmallRNA(si3)              *TSS   --------->MYB52(2)              <---------TOE2(3)   tctttgtctctctcgatctcctctgctctgagttttttttttttttgcagagttagtttgaatgtgtggtttgaaatgagctatgaaggaagtgaaagag  19152600                                                                   --------->ANAC55(2)          -----        --------->TOE2(3)     <---------ANAC58                     <---------ANAC55(2)        -------      <---------YAB1          <---------ANAC46           <------ZmHOX2a(1)         --------->ANAC58      <---------TOE2(3)       <---------ANAC58         <---------TOE1(3)       <---------HSFB2a(2) ----->ARR11(3)      <------------CBF <----------DOF2  <---------TOE2(3)       --------->HSFB2a(2) >DOF2<---------TOE1(3)      ---------->ID1<---------AHL20(2)      <---------ANAC46--------->ANAC58--   atgttgttatcgttagaaacttggattgtatgtcgttttccttttttaattcagtttaaggaagaaactacgtgatgttttctgtaagcaaaaatagaaa  19152700                                                                                        <-----------GT1          <-------GAMYB                                             --------->YAB1  --------->ATHB12   --------->ANAC46                                              <-----------GT1   <---------YAB1 ------>GT1                                                <<<<<<<GRF7             --------->ICU4 --->DOF2<---------ZAT6    <------ZmHOX2a(2)             ----------->HVH21         <---------ATHB12 ------->CCA1(2)    <----------DOF2                    ----------->RAV1(2)  <---------ETT(2)   gataaacgagactgttaatgggctttgcgatcagcccatatagaactagaattcaaaacctgacatttaaccatactctcgacccatgatttacgaattg  19152800                                                                   --------->YAB1                                                                 --------->AHL20(2)                   ------>ZmHOX2a(1)                        ------->GAMYB                           -      --------->CCA1(2)       <----------DOF2             <---------At4g35610         ---------->DOF2     <---------ARR14(2)  <----------DOF2----------->GT1   --------->At4g35610  <---------YAB1       <   actagacgatatgaaaatgtccttggtcttttctttattagtttgttaaacttttgatgcaactgaaaataatagagaaagattatagaaaagtctttgt  19152900                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----             <---------MYB52(1)                                                                  ----           <---------ZAT6                                   --------->TOE2(3)                    <---     <---------AHL20(2)                                     --------->TOE1(3)                    <---     <---------ICU4                                        --------->At4g35610                  -----    --------->AHL20(2)                                  ------>ZmHOX2a(1)                       <---- --------->AHL20(2)                              --------->AHL20(2)                             ----- <---------AHL20(2)            --------->YAB1    <---------AHL20(2)       <---------ANAC55(2)   <---- -------->AHL20(2)        <----------DOF2        --------->AHL20(1)   --------->AHL20(2)        <---- ---------AHL20(2)        <---------DAG2         <---------AHL20(1)   --------->YAB1            -----   aaattaataaatactgttatccaaaatactttatcacaaaactaaaacaaatttattcctaagcttaaacaataatatgtaaactaagtgaaaaatccac  19153000  Previous    Next  AGI:  At5g47110.1    Description:  lil3 protein, putative. similar to LIL3:1, transcription factor [Arabidopsis thaliana] (TAIR:AT4G17600.1); similar to Lil3 protein, putative [Brassica oleracea] (GB:ABD64919.1); contains domain SSF103511 (SSF103511) Range:  from: 19151213    to: 19152544    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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