Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->AHL20(2) ---------->GT1                                                                       --------->ANAC58 -------TEIL                                                                          --------->ANAC58 -------P                                                                         --------->YAB1 -----GAMYB                                                                      <---------YAB1 ------MYB46(3)                                                                <---------ICU4 -----AtMYB61                                                                  --------->YAB1 -->LBD16                                                                   --------->YAB1 --ANAC46                                         --------->ATHB12          <---------ICU4 --HSFB2a(2)                                --------->DAG2                 <---------ATHB12 ->HSFB2a(2)                               ---------->DOF2    <-----------GT1 <---------YAB1<-------- -LBD16         --------->ZAT6       ----------->GT1<---------GLK1(1)    --------->ANAC46   ---------   ggttgataaaatcgccaaactctactacaatttctgagattgtgaaaaagcttgatttctgatattactcactccccatcatcatcataagcatctttaa  19149100               --------->YAB1                              <---------ATHB51              <---------ATHB12                             <---------YAB1       <--------ATHB1                                   --------->ANAC58      --------->ICU4                           <----------ID1                                     ---      <---------YAB1         ----------->RAV1(1)        --------->ANAC58                          ---      <---------ATHB12       ------>MYB46(1) ---------->DOF2                                   <-----    --------->YAB1           ------>MYB83  --------->AHL20(2)        ----------->GT1           ------ --DOF2--------->ATHB12   --------->ANAC46 <---------AHL20(2)  --------->AHL20(2)    --------->AHL20(2) >TOE2(3)   --------->WOX13(1)     --------->DAG2       --------->ANAC46   <-----------GT1  ---------   aaactacaatgattcaatcaaaaacaaaacccaacaaaaattgaattaaaagacgaacacgataattgaataagtataaaccctagaaaaaataagcagc  19149200                                                                                  <---------GLK1(1)                                                                                  <---------HSFB2a(1)                                                                                 --------->ARR14(2)                                                                                 <---------ARR14(2)                                                                                 --------->GLK1(2)                                                                                 <-----------ARR10        --------->WOX13(1)                                             <---------DEAR3(1)  <-----------RAV1(1)                                               <------ZmHOX2a(1)          <----- ------>At4g35610                                         --------->ANAC55(2)--------->HSFB2a(2) ------>ZAT2                                        --------->AHL20(2)<---------At4g35610    -------- ----At4g35610                           <---------AHL20(2)    <---------REM1(1)<---------GLK1(2) --->At4g35610                   <---------YAB1     <---------AHL20(2)--------->At4g35610------->TEIL >At4g35610            <-----------GT1  --------->AHL20(2)<---------ANAC55(2)<---------HSFB2a(2)   agctatgtggcaatcgaattcagattaacaaaattttgaatattaaatcggaaattaaacaggtaatgtaggagcggctcgagaatctccgaacccagaa  19149300                                                        <---------DEAR3(1)                                                     <------NtERF2                                                     --------->ATERF1(1)                                                     --------->ZAT2                                                     <---------ZAT2                                                    <---------DEAR3(2)                                                    <---------ATERF1(1)                                                    ------>NtERF2                                                   --------->ATERF1(2)                                                   --------->DEAR3(1)                                                   <---------DEAR3(1)                                                   <---------ATERF1(2)                                                  --------->DEAR4(2)                                                  --------->ATERF1(1)                              --------->MYB46(3)  <---------LBD16    ----------->GT1          -------->P          <---------ATERF1(1) ----GLK1(2)           <---------ZAT18  --------->MYB52(1)<-----------HVH21        <---------YAB1 ->LBD16    ----------->GT1<---------MYB111(1)  <---------DEAR3(1)       <------ZmHOX2a(1)     ------   actgaatggtgaaatcgaaaaattgagcacttaccaccgagagaacgggctcgccggctcggtgagagagagagaggaagggattttgatttttgagaaa  19149400                     ------>ZmHOX2a(2)                    --------->GLK1(1)                  <---------At4g35610                    <---------GLK1(1)                  <---------ZAT2                    <------ZmHOX2a(2)                  --------->At4g35610                   --------->ARR11(3)                <---------DEAR3(1)                   <---------ARR14(3)               --------->SPL7                   --------->ARR14(2)               --------->RAP2.6(3)                   <---------ARR11(3)             <---------SPL7              <---------ANAC58                   <---------AGP1                 ----------->HVH21           <---------ANAC58                   --------->ARR14(3) <---------At4g35610                    <---------ZAT2      --------->CCA1(2) ----------->HVH21        ------>ZmHOX2a(2)           --------->ZAT2        <-     <----------ID1<---------ARR14(2) --------->At4g35610                 <----------DOF2      <----- --->CCA1(2) >>>>>>>>>TBF1          <--------P--------->ATHB12  <-----------GT1     <----------DOF2--   cgagagagagacgaagaagaagatctctgaccacgatggtagatgaattgatcggacggctgagattaacttcagactttgctgggctttttttgttcgt  19149500                                                               <---------ARR14(2)                                                        --------->ALFIN1                                                       ------->MYC3                                                       <-------PIF4                                                       <-------MYC3                                                       ------->PIF4                                                       ------->MYC4                                                       <-------MYC4                                                       ------->PIF5                                                       <-------PIF5                                                       ------->MYC2                                                       <-------MYC2                                                      <---------TGA1a                                                      <---------O2                                                      --------->TGA1a                                                     ------------>OsbHLH66                                                     <---------TOE1(2)                    --------->YAB1                  <---------ALFIN1    <---------ANAC58          *TSS      <---------ICU4                  <------------OsbHLH66      <-----------------AGL1                       <---------SPL7       >>>>>>>>CAMTA3            <--      ----------------->AGL1                    <-----------HVH21       <---------ANAC58       <-----   --------->ATERF1(1)<---------YAB1           ------>ZmHOX2a(2)        <---------ANAC46      ------- --------At4g35610 --------->ICU4            <---------ARR11(3)--------->ARR14(2)          ---------- ------HVH21<---------LBD16                <---------YAB1 --------->ALFIN1             <---------ANAC58 ------->At4g35610 <---------ATHB51    <-----------GT1--------->O2----------->HVH21    <---------ANAC58   cagaggcctccgattggggaaattatgagagagtttgtttataacatgatcgtcgcacgtgtgagggtctgaacgcgtgtgaaacacatccttgtcattt  19149600                          <---------YAB1                         --------->AHL20(2)                 -------->P    <---------AHL20(1)                 ------>MYB46(1)                 ------>MYB83  --------->AHL20(2)                --------->MYB55(1)                                    <---------YAB1               <---------MYB111(1)                                  -------->ATHB1               --------->MYB46(3)         <---------At5g28300       --------->ATHB51               <---------MYB59 <---------AHL20(2)<---------------------WRI1               --------->AtMYB61         <-----------GT1            <---------ICU4               <---------MYB111(2)      <---------YAB1             <---------ATHB51    <----------DOF2------->GAMYB     <---------YAB1                <---------YAB1 ---------GT1  <---------MYB46(2)    <---------AHL20(2)       --------->ANAC58 ----ICU4      <---------MYB55(2)   <---------AHL20(2)      ---------->DOF2 -->ICU4      --------->MYB46(3)  <---------YAB1--------->ALFIN1   --------->ICU4 >ID1       <-----------GT1<---------AHL20(2) --------->ALFIN1--------->ANAC58----------->HVH21   ttacctctttttttctaccaaccccatttttattttatttttattacagtgtgggaagaaaacaaagccattattgttgtttgacattttagtttcgaaa  19149700                                            <---------ICU4                                           <---------YAB1                                         <--------HAHB4                                         <---------ICU4                                         --------->YAB1                         <---------MYB46(3)--------->ICU4                     --------->ATHB12   <---------ATHB12                 --------->YAB1                    <---------AHL20(2)--------->WOX13(1)                 <--------ATHB1            <-                    <---------YAB1----------->GT1                       <---------ATHB12        <----                <----------DOF2 ---------->DOF2            <-----------GT1--------->ARR11(3)    <----           <----------DOF2    <---------TOE2(3)<-----------GT1          --------->ICU4     ----------   tttcaactttcaactttccttttttattggttaagaaagttaatcatttttacaagttttcttacaattctgcaatgattttgttttgtttttgtttttt  19149800           --------->AHL20(2)          <---------AHL20(1)          --------->AHL20(1)          <---------ARR11(3)                                              ----------->GT1  ---------->DOF2                                                  --------->REM1(2) <---------AHL20(2)                                                --------->ZAT14 --------YAB1                                                      <---------ZAT14 -----AHL20(2)                                                    --------->ALFIN1                 <- -----YAB1--------->ARR11(3)                   <-----------GT1 --------->DAG2                    ---- >ID1  >>>>>>>>>>GT-3b                        <---------YAB1  ---------->DOF2               <--------   tattaaaagaaaaatatttagactcgaattttgtttttatgtaagtttataactgtaagaaaaaaaaagtgtagagaggtaactagtacttgtagagtca  19149900                                                                                                    -                                                                            --------->YAB1         <-                                  <---------AHL20(2)                       <---------YAB1         <--                                  --------->AHL20(2)              ------>ZmHOX2a(2)               ---                             <---------ARR11(3)                 --------->ARR14(2)                <--    >>>>>>>>>MYB98           --------->ARR11(3)                 <---------ARR11(3)                ---   <-----------GT1       --------->YAB1                        <---------CCA1(2)                  <--  <-----------GT1      <---------TOE2(3)         <---------AHL20(2)<----------DOF2                <-- --------ARR11(3)--------->ARR11(3)            --------->CCA1(2)--------->ARR11(3)                --- ----->ICU4      <---------ARR11(3)           <---------ARR11(3)<---------ARR14(2)       <---------At4g35610 -ZAT6       ---------->DOF2--------->YAB1    --------->ARR11(3)<---------AGP1       --------->AtLEC2   agatttaacatactcaaaagatactaagaatgatatttatttgtataagatataattttcaaattggatctttcattttcataatccatacagatgtcaa  19150000  Previous    Next  AGI:  At5g47100.1    Description:  CBL9 (Calcineurin B-like protein 9); calcium ion binding. Identical to Calcineurin B-like protein 9 (CBL9) [Arabidopsis Thaliana] (GB:Q9LTB8); similar to CBL1 (CALCINEURIN B-LIKE PROTEIN 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT4G17615.1); similar to calcium sensor protein [Thellungiella halophila] (GB:ABW21691.1); contains InterPro domain Calcineurin B protein (InterPro:IPR015757); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Recoverin; (InterPro:IPR001125); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 19146867    to: 19149510    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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