Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               --------->ZAT14                             <---------ZAT14                         <-----------GT1                        <---------ZAT14                        --------->ZAT14               <---------O2--------->ANAC46           --------->TOE2(3)               --------->ANAC55(1)     ------->GAMYB  <----------DOF2               <---------ANAC55(2)    --------->MYB46(3) ------MYB52(2)--------->ANAC55(2)    --------->DEAR3(1)                         <---------ALFIN1 -->MYB46(3)   --------->ANAC58       <---------MYB55(2)   <---------WOX13(1)    ----------->RAV1(1) >P            --------->ANAC46       ----------->HVH21 --------->AHL20(2)<-----------RAV1(1)<------- >MYB52(1)     --------->ANAC58       <---------MYB52(2)<---------AHL20(2)<---------ATHB12   --------   ctaacttctggttcaacacgtagcatttcactgcacagcaacgaccgctcttgtttctttaattgccattttgccaatgttgcccacatttgtttttaga  19144100                                                                             --------->YAB1                                                --------->AHL20(2)          <---------AHL20(2)       --------->ANAC55(2)                      <---------AHL20(2)         --------->AHL20(2)       <---------ANAC55(2)  --------->AHL20(2)  <---------AHL20(1)      <----------DOF2             < --HSFB2a(2)            --------->AHL20(2)   --------->AHL20(2)       ---------->ID1               -- ->HSFB2a(2)     --------->CCA1(2)    ---------->DOF2            <----------DOF2                <----   aatatgctcacttaacaagatagacataaattacttacataaaagaataaaaaattttgtattatttcttttgtctttttaataacatagttggcacata  19144200                          <-----------GT1                              <---------RVE1(1)                    <---------AHL20(2)                                <---------ARR11(3)                  <---------RVE1(1)         --------->GLK1(2)         --------->ARR11(3)                 <---------GLK1(2)      --------->YAB1         --------->AHL20(2)            <---------AHL20(2)          -------->HAHB4         <---------AHL20(2)         --------->AHL20(2)            --------->ICU4       ------->TEIL         --------->AHL20(1)            <---------YAB1    ----------->GT1         <---------AHL20(1)            <---------ATHB12  <---------ANAC55(2)   --------->YAB1--------->ARR11(3)   <---------TOE2(3)  --------->ANAC55(2)   <-----------GT1<---------CCA1(1)  --------->YAB1      --------->ANAC58           --------->GLK1(2)  <---------YAB1 <---------ARR11(3)  <---------ICU4      <---------ANAC46       --------->YAB1 ---------ICU4 <---------TOE1(3)--------->ZAT14          --------->ANAC58<---------AHL20(2)       <-- ------->ICU4  <---------TOE2(3)<---------ZAT14      <-----------HVH21<---------GLK1(2)<----------DOF2 ---TEIL <---------ARR11(3)<---------At5g28300 <----------DOF2 <---------YAB1  <---------YAB1     <--   cattattacaatattttaagatttttttttacagtttactaatgataatctttcatgtcacgtatattattagatttttttttgataatctttcagtttt  19144300                                                                                      ---------->DOF2                                                                         --------->AHL20(2)    <-----                                                                         <---------AHL20(2)  --------                                                                     <---------MYB46(3)      --------    --------->At5g28300               <-----------GT1                ----------->GT1  =============== -------ANAC58                  ---------->ID1--------->YAB1  --------->WOX13(1)    --------->ANAC58 -------ANAC58     <---------ICU4 <----------DOF2          --------->TOE2(3)        --------->ANAC58   tcttgctgtaatttgttttaaaaatgaccgatttgtcttttaaccaattcatcatccaaaacatcaattagtggtttaaatggcccaagaaagcccaaca  19144400                          <-------MYC3                          ------->MYC3                         <---------TGA1a                         <---------bZIP60(1)                         --------->TGA1a                         --------->bZIP60(1)                         --------->O2                         <---------O2<-------MYC3                         --------->bZIP60(2)                         --------->ANAC55(2)                         <---------ANAC55(2)                         <---------ANAC46                         --------->ANAC46                         --------->ANAC58                         <---------ANAC58                         --------->ANAC58                         <---------ANAC58                                 <-------GAMYB          --------->LBD16============================================bZIP_DOF         --------->DREB2C(2)         ------->MYC3                         <-----------HVH21         --------->DEAR3(1)----------->HVH21                             <------MYB46(1)        <---------LBD16  ============================================bZIP_DOF       --------->MYB52(1)<---------bZIP60(2)                             <---------DEAR3(2) ------RAV1(2)       <-----------HVH21                                  <---------DREB2C(2) --->RAV1(1) ======================bZIP_DOF                   <----------DOF2 ->MYB52(1)  ---------->DOF2      <---------ALFIN1        <----------DOF2<------MYB83 *TSS ==================================bZIP_DOF         <-----------GT1     <---------MYB46(3)<------ZmHOX2a(1)   ggtgatgaacaccggcaaagtcttgtcacgtgaccagcacatgaacgagacgatttacatctttctttagtcagtcggtcgagtccgagagaggagaaca  19144500                                                              --------->CCA1(2)                                                             --------->ARR11(3)                                                             <---------ARR11(3)                                                       <---------ANAC46                                                      <---------LBD16                                                      <---------At4g35610                                                      --------->RAP2.3(1)                                                      --------->ATERF1(1)                                                      <------NtERF2                                                     <---------ORA47(2)                                                     <---------RAP2.3(1)                                                     <---------RAP2.6(1)                                                     <---------ATERF1(1)                                                     <---------RRTF1(1)                                                     <---------DEAR4(2)                                                     <---------ERF1                                                     ------>NtERF2                                                    <---------DREB2C(2)                                                    <---------RRTF1(3)                                                    <---------RAP2.3(3)                                                    <---------RRTF1(2)                                                    <---------RAP2.3(2)                                                    <---------RAP2.6(2)                                                    <---------DEAR3(1)                                                  <---------ATERF1(1)                                          ---------->DOF2<------NtERF2                                   ----------->RAV1(1)--------->At4g35610                                  --------->MYB46(3)--------->DEAR3(1)                                  --------->REM1(1) <---------ATERF1(2)                                ----------->RAV1(1)<---------ABI4(1)                             --------->ANAC58    --------->ANAC58                                   <                             --------->ANAC46    <---------DEAR3(1) ------->GAMYB          --------->GLK1(2)         >>>>>>>>>TBF1       --------->ANAC58    --------->ANAC58--------->MYB52(1)   <---------ETT(2)   atggaagagaagaagaagacgatggagatggaagcaacaacaatgaaaggcacggcggcggaagatataacggagagactctcttctctcgacaatctct  19144600                 <---------MYB52(2)           --------->ORA47(1)           ------>NtERF2           <---------SPL7          --------->DEAR3(1)          --------->RAP2.3(2)          --------->RAP2.3(3)          <---------ANAC46         <------NtERF2         --------->DEAR4(2)         --------->ATERF1(1)         --------->RAP2.3(1)         --------->ORA47(2)                   --------->ARR14(2)        <---------ATERF1(1)                   <---------ARR14(2)        ------>NtERF2                        --------->GLK1(1)                   <------NtERF2       --------->ANAC46                  --------->ANAC58                       ------>NtERF2      ------->MYC2                       --------->ANAC46                       --------->LBD16      <-------MYC2                       --------->ANAC58         ------>ZmHOX2a(1) <---------MYB52(1)      <-------PIF5           <---------At4g35610                  ==================HOX2a_HOX2a      <-------MYC3  <---------At5g28300 ------>MYB83  ==============================HOX2a_HOX2a      ------->PIF5 --------->MYB52(1) --------->AtMYB61       --------->AtMYB61--------->ANAC46      ------->MYC3 <-----------GT1   --------->MYB46(3)    <---------ALFIN1   <---------LBD16     --------->ANAC58       ------->TEIL------>MYB46(1)  ------>ZmHOX2a(1)   ------>ZmHOX2a(2)     --------->ANAC58  --------->At4g35610------->GAMYB  ===========================HOX2a_HOX2a  <---     --------->ANAC46--------->MYB46(3)--------->MYB52(1)--------->HSFB2a(2)--------->PCF5     <----- -----------GT1  <---------ATHB12 <---------ETT(1)    ------>ZmHOX2a(1)<---------ANAC46    ----------   attttccacgcgccgtccaattaaccgctgcatcttccgaccaacgcaaatccatcctcctcgacctcctccgtcgtgatcccgccgtttttctaggtac  19144700                                                                                              -------                                                                                       <---------ANAC55(2)                                                                                       --------->ANAC55(2)          <---------At4g35610                                                        --------->AHL20(2)    <---------ICU4                                                                   <---------AHL20(2)   <---------MYB52(1)       <---------YAB1                                      <---------------AGL15 -------DOF2         ------>ZmHOX2a(1)               <---------WOX13(1)         --------------->AGL15 --TEIL   --------->At4g35610                      --------->ATHB12             ------>ZmHOX2a(1) ----->AtSPL8    --------->ARR14(2)               <---------YAB1               --------->TOE2(3)   tttccattattctgctccaattcctcgattctaatttcaattttgtctaagtatgattggatgtgttactgagtttttagtccttaattaagtacttggt  19144800                                              <---------TOE2(2)                                              <---------TOE1(2)                    <---------TOE2(3)  --------->MYB52(2)               <------MYB83          <--------P               <------MYB46(1)       <---------MYB52(1)                         --------->YAB1              --------->MYB59     <---------TOE2(3)                          --------->YAB1  <-------          --------->ATHB12      <---------MYB52(1) --------->MYB52(2)        <---------ICU4  <------- ---->GT1<-------TEIL           ------>ZmHOX2a(1)<--------P               --------->YAB1     <-------   gaaactattgattcattaggttaagtttttagtccttaggttagttcataggttagtagatagatgagttttggcttcataatcatctaagtattgagtg  19144900                                                                                                <----                                                                                            ------>ZmHOX2a(2)                                                                                    <---------ARR11(3)                           --------->AHL20(2)                           --------->ATHB12  <---------ARR14(2)        --------->YAB1     <---------AHL20(2)                          <---------YAB1--------->CCA1(2)       <---------YAB1  <---------AHL20(2)  --------->At4g35610       --------->YAB1 --------->ARR11(1)  ----------->GT1      <---------YAB1      <---------At4g35610    <----------DOF2   --------->ARR11(3) --ANAC58          <----------DOF2--------->ATHB12               <---------ANAC58   --------->ARR14(2) --ANAC58          <---------DAG2<---------YAB1                  <---------ANAC58   <---------ARR14(2) --ANAC46       ------->TEIL<---------AHL20(2)        --------->MYB52(2)<---------ICU4    --------->ARR14(2)   tgtaatgttattagaatgaaacttttttattaaatatgatttgggaactgaagcattagttgtttttgctttgatgatttcagagagatatggatcggag  19145000  Previous    Next  AGI:  At5g47090.1    Description:  similar to hypothetical protein 26.t00106 [Brassica oleracea] (GB:ABD65045.1) Range:  from: 19144486    to: 19145996    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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