Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------ZAT6                         <---------TOE1(3)                 --------->ARR14(2)        <---------------AGL15        --------------->AGL15       <-----------------AGL2                         <-------TEIL       <-----------------AGL1              --------------->AGL15       ----------------->AGL3              <---------------AGL15       ----------------->AGL2             <-----------------AGL3  <XXXXXXXXXXXXXXXXXXXXMIR413       <-----------------AGL3             ----------------->AGL3 ---------->DOF2       ----------------->AG       --------->GLK1(2)  --------->ARR14(1)       ====================================================MADS_MADS       ====================================================MADS_MADS                  --------->YAB1       --------------->AGL15      <---------ARR14(2)<---------ARR14(2)             ------->GAMYB       ----------------->AGL1  <---------ANAC55(2)  --------->ARR11(1)            --------->MYB46(3) >ARR11(3)      <------ZmHOX2a(1) --------->ARR14(2)--------->ARR14(2)           -------->P -ARR11(3)  <---------ATHB12   --------->ANAC55(2)----------->ARR10           <---------MYB52(2)   aacttgattcccaaatcaggaaactctagggttaagtatctgtttctaaatgtagattcgatttcaatagagcaagagagactaaccatcagaaaccgta  19143400                                                                                           ----------                                                                                          <---------SPL7                                                                                         --------->RAP2.3(2)                                                                                        --------->RAP2.3(1)                                                                                       ------>NtERF2                                                                                       --------->ABI4(1)                                                                                       <---------ATERF1(1)                                                                                      --------->ANAC46                                                                                      --------->RAP2.3(3)                                                                                      --------->RRTF1(3)                                                                                      --------->DEAR3(1)                                                                                      --------->RAP2.3(2)                                                                                      <---------DEAR3(1)                                                                                     --------->ATERF1(1)                                                                                     <------NtERF2                                                                                     --------->RAP2.3(1)                                                                                     --------->RAP2.6(1)                                                                                     --------->ORA47(2)                                                                                     --------->ERF1                                                                                     --------->DEAR4(2)                                                                                     --------->RRTF1(1)                                                                                    <---------RAP2.3(1)                                                                                    <---------ATERF1(1)                                                                                    ------>NtERF2                                                                                   --------->DEAR3(1)                                                                                   <---------DEAR3(1)                                                                                  <------NtERF2                                                                                  --------->ATERF1(1)                                                                                 <-----------HVH21                                                                             <---------DEAR3(1)                                                                 --------->YAB1<------NtERF2                                       <---------TOE2(3)        <---------ATHB12 <---------ATERF1(1)                                    <--------P                --------->WOX13(1)<---------DEAR3(1)                                 <---------YAB1        --------->At4g35610  <------NtERF2--------->RAP2.6(2)                                 <---------TOE2(3)     <---------At4g35610  --------->ATERF1(1)  ----                          <---------ARR14(2)        <---------At4g35610    ------>NtERF2<------NtERF2               --------->At4g35610<---------MYB46(3)--------->At4g35610    <---------ATERF1(1)   <---      --------->HSFB2a(2) --------->GLK1(2)         <---------ZAT2         <-----------HVH21  <------      <---------HSFB2a(2)<---------GLK1(2)         <-----------RAV1(1)    --------->DEAR3(1)---------   ttgttcttcgagagagaagcagaacgagaatctctatggttgatgttattcgactgctgcttcccaatcaagttcgccgtcgtcgtcgccgccgtaacgg  19143500                                                                          <------ZmHOX2a(2)              <---------MYB52(1)                                     <---------DOF5.7(2)              --------->DOF5.7(2)                                  <---------MYB52(1)       <----------DOF2                                             --------->DOF5.7(2)     ----------------->AGL1                               <-------GAMYB  <---------ARR14(2) <----------DOF2                                         <---------ANAC46--------->ARR14(2)       <-- ->HVH21     <-------GAMYB                     <-------TEIL     ------>ZmHOX2a(2)                <--- ----->ARR14(2)                           <------ZmHOX2a(1) --------->WRKY12                  ------- ------ARR14(2) <---------DOF5.7(2)       =============================HOX2a_HOX2a        --------->HSFB2a(2) ------MYB.PH3(1)                   <------ZmHOX2a(1)    <---------MYB46(3)               <---------HSFB2a(2) >MYB52(1)   <---------RAP2.6(3)    ===================================HOX2a_HOX2a<-----------HVH21   ttcctttgcctttgccgttaacttgacgagaggttgaaggagaaggacgttcaagagcgtcgttgatccgtttacgatccacaacttcaggtctcgaatt  19143600      ------>ZmHOX2a(1)                                                                       <------  --------->ARR14(2)                                       --------->At4g35610               <-------  <---------MYB52(1)              <---------ANAC55(2)      <---------At4g35610              <-------- -------At5g28300                --------->MYB52(1)     <---------At4g35610        --------->ANAC58 --------GT1                    --------->RVE1(1)       --------->At4g35610        --------->ANAC58 -->ARR14(2)        <---------YAB1--------->ANAC55(2)---------->DOF2    <----------DOF2    <---------LBD16   caccgttcctctgtctctatacatgattctaaaaatacctgataaatctctctcttacagcagctattgtacaactttcatcggcatgtaatcgccggtg  19143700                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                             ------->TEIL<---------ANAC46                                                                             <---------ARR11(1)                                                         <---------AHL20(1)  --------->ARR14(2)                                           <---------ANAC58     <-----------GT1          *TSS                                           <---------ANAC58 <---------YAB1   --------->GLK1(2)        --------->GLK1(1)      <----------DOF2           --------->AHL20(2)  <---------ARR14(2) -----HVH21     <------NtERF2--------->At4g35610         <---------AHL20(2) <---------CCA1(2)   ----- --DEAR3(2)    ------>NtERF2 <---------At4g35610    <---------AHL20(2)      <---------ARR14(1)  ----- -DEAR3(1)    <---------DEAR3(1) --------->STY1(1)<----------DOF2   <----------DOF2   <----------DOF2   agagattgagaaatcgacggcgattaccttgagctctagggttttgcttcttcttttattttatttttagcttttgtcgaatcttgttctttcgcgtttc  19143800                          <---------YAB1                         <---------GLK1(2)     <---------At5g28300                 --------->At5g28300               --------->SPL7                 <---------WRKY38(1)          <---------YAB1             <---------SPL7            <---------AHL20(2)               <---------AHL20(2)            <---------ANAC46      <---------AHL20(1)                    --------->AHL20(1)           <---------------AtSPL8 --------->AHL20(2)             ----------->GT1  ----------->GT1         <---------MYB52(1)       <---------AHL20(2) --------->AHL20(2) --------->AHL20(2)         -- ---->ANAC58<---------ANAC58   <---------AHL20(2)    <---------AHL20(2)--------->AHL20(2) ----------- ---->ANAC58<---------ANAC58 <---------YAB1 <-----------HVH21--------->ATHB12    ----------->GT1 ----   gcaactagtctgtttcgtacagagaaagattattattttattttttggtcaccgtttaatttttgatttgaaaaaaaattataggggtaaaatgggaaat  19143900                     ==================================================bZIP_DOF                     <---------TGA1a                     <---------O2                --------->LBD16               --------->LBD16               --------->HSFB2a(2)             --------->ANAC58          <---------GLK1(1)                 --------->ZAT2          --------->At4g35610              --------->ANAC58          --------->GLK1(1)            --------->At4g35610         --------->ARR11(3)          <--------P--------->ANAC58         <---------ARR11(3)----------->GT1 --------->ANAC58                                      <---     ==========================bZIP_DOF<---------At4g35610                                    ------- --------->GT1<---------LBD16       <---------MYB52(1)                    --------->CCA1(2)  -------- >GT1---------->DOF2 =========================MYC_MYB              <---------ZAT6           --------- ------->GT1 --------->MYB52(1) <---------ARR14(2)          ---------->DOF2               <---------MYB52(2)   agagaaataaagagctcccggagacgagggagtgaatcggtagctaagctagccactagagagaaagtagtgggagagatgggtcgaatcgaactaacca  19144000                             <---------ZAT14                             --------->ZAT14                         <-----------GT1                        --------->ZAT14                        <---------ZAT14               --------->ANAC58        ------->GAMYB  --------->TOE2(3)               --------->ANAC55(1)    --------->MYB46(3)               --------->ANAC46       <---------MYB52(2) ------MYB52(2)<---------ANAC55(2)    ----------->HVH21    <---------WOX13(1)    <---------ALFIN1 -->MYB46(3)   <---------O2--------->ANAC46           <----------DOF2            ----------->RAV1(1) >P            --------->ANAC58       --------->DEAR3(1)--------->AHL20(2)<---------ATHB12   -------- >MYB52(1)     --------->ANAC55(2)    <---------MYB55(2)<---------AHL20(2)<-----------RAV1(1)<-------   ctaacttctggttcaacacgtagcatttcactgcacagcaacgaccgctcttgtttctttaattgccattttgccaatgttgcccacatttgtttttaga  19144100                                                                             --------->YAB1                                                <---------AHL20(2)          <---------AHL20(2)       <---------ANAC55(2)                      <---------AHL20(1)         --------->AHL20(2)       --------->ANAC55(2)  --------->AHL20(2)  --------->AHL20(2)      <----------DOF2             < ->HSFB2a(2)            --------->AHL20(2)   --------->AHL20(2)       ---------->ID1               -- --HSFB2a(2)     --------->CCA1(2)    ---------->DOF2            <----------DOF2                <----   aatatgctcacttaacaagatagacataaattacttacataaaagaataaaaaattttgtattatttcttttgtctttttaataacatagttggcacata  19144200                          <-----------GT1                              <---------RVE1(1)                    <---------AHL20(2)                                --------->ARR11(3)                  <---------RVE1(1)         --------->GLK1(2)         <---------GLK1(2)                 --------->ARR11(3)     --------->YAB1         <---------YAB1            <---------AHL20(2)          -------->HAHB4         --------->AHL20(2)         --------->AHL20(1)            <---------YAB1       ------->TEIL         <---------AHL20(1)            --------->ICU4    --------->ANAC55(2)         --------->AHL20(2)            <---------ATHB12  ----------->GT1   --------->YAB1<---------ARR11(3)   <---------TOE2(3)  --------->ANAC58              <----------DOF2   <-----------GT1<---------CCA1(1)  --------->YAB1      <---------ANAC55(2)    --------->YAB1  <---------YAB1 <---------GLK1(2)   <---------ICU4      --------->ANAC58      <---------YAB1 ---------ICU4 <---------TOE1(3)<---------ZAT14          <---------ANAC46<---------AHL20(2)       <-- ------->ICU4  <---------TOE2(3)--------->ZAT14      <-----------HVH21<---------ARR11(3)          <-- ---TEIL <---------ARR11(3)<---------At5g28300 <----------DOF2 <---------AHL20(2)   --------->GLK1(2)   cattattacaatattttaagatttttttttacagtttactaatgataatctttcatgtcacgtatattattagatttttttttgataatctttcagtttt  19144300  Previous    Next  AGI:  At5g47080.1    Description:  CKB1 (casein kinase II beta chain 1); protein kinase CK2 regulator. Identical to Casein kinase II subunit beta (CKB1) [Arabidopsis Thaliana] (GB:P40228); similar to CKB2 (casein kinase II beta chain 2), protein kinase CK2 regulator [Arabidopsis thaliana] (TAIR:AT4G17640.1); similar to Casein kinase II beta chain, putative [Brassica oleracea] (GB:ABD65048.1); contains InterPro domain Casein kinase II, regulatory subunit, beta-sheet; (InterPro:IPR016150); contains InterPro domain Casein kinase II, regulatory subunit, alpha-helical; (InterPro:IPR016149); contains InterPro domain Casein kinase II, regulatory subunit; (InterPro:IPR000704) Range:  from: 19141839    to: 19143789    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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