Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->ARR11(3)                                    --------->ANAC58         <---------ARR11(3)                                    --------->ANAC46        <---------CCA1(2)                                      --------->ANAC58 ---------ETT(2)       --------->TOE2(3)                    --------->TOE2(2) -------->ETT(2)      ----------->GT1          --------->At5g28300 --AHL20(2)          <---------TOE2(3)       --------->ZAT6 --------->TOE1(2)                     --- >AHL20(2)        --------->AHL20(1)       >>>>>>>>>WRKY18 --------->YAB1                         --- -AHL20(2)       --------->YAB1         <---------ICU4    <---------ATHB12                        --- -AHL20(1) --------->TOE2(3)      ----------->RAV1(1)  ------>ZmHOX2a(1)                         <---   tgtcgactatatatcttaaaaataatgttaaaaatgcaacaattttgacagtaattcctaatcatacgaaaattttcaaactttgcaacttcttcatgta  19133600                                                                        -------->HAHB4                                                                        <--------ATHB1                                                                        --------->ATHB51                          <-----------GT1                               --------->ATHB12                     <--------ATHB1  <-----------RAV1(1)                <---------ICU4                     --------->YAB1 <---------TOE2(3)                  <---------AHL20(2)                     --------->AHL20(2)                                --------->ICU4                     <---------AHL20(2)                                <---------ATHB51          --------->WOX13(1)    --------->YAB1                   ----------->GT1       --------->YAB1<---------AHL20(1)                        ---------->DOF2 ------>ATHB51       <---------ICU4--------->YAB1            <---------AHL20(2)     --------->DAG2 ----->ATHB1        --------->ICU4 <---------ICU4            --------->AHL20(2)    ---------->DOF2 ------>ATHB12----------->GT1--------->TOE2(3)        ----------->GT1  <---------YAB1 ------YAB1 <---------ATHB12 <----------DOF2        ---------->DOF2--------->AHL20(2)         -------   ttattgcattgacaatcagttaataattttactttaataatgttgtctaagtaaaaaagaaaattaaaagttaataattgaactaaaaagtgaatgtcga  19133700                                        ------>ZmHOX2a(1)                                       --------->TOE2(3)                                    --------->ARR14(2)                                  --------->HSFC1(2)                                  <---------HSFC1(2)                                  <---------HSFB2a(1)                       --------->At4g35610                                                          <                       <---------At4g35610                                                          <                 <-----------GT1  --------->HSFB2a(1)             <---------ANAC55(2)             ---            <---------DAG2      ---------->DOF2                   --------->ANAC58    --------->ANAC58            <----------DOF2  --------->HSFB2a(2)                  --------->ANAC58  <-----------GT1 - ---->GT1<-----------GT1     <---------HSFB2a(2)     <------ZmHOX2a(1)---------->DOF2 --------->ANAC58   aaaaaaacatttaacttttttacttagctctctcgaaagttcctcaaaaaccgaaggacgagtaagtcacgaaaaagaccattttgtaacgcctctctat  19133800       ------>ZmHOX2a(1) --------->ATHB51 <---------ICU4                                                                 --------->YAB1 -------->ATHB1                                                          <----------DOF2 ---------ATHB51                                                   --------------->AtSPL8           < ---------ATHB12      ----------->GT1        ----------->RAV1(1)  <---------ANAC58         --------->ANAC58 ------>WOX13(1)     --------->DAG2         <----------ID1        <---------ANAC46         --------->ANAC58 -------->ICU4      ---------->DOF2---------->DOF2                <---------ANAC58       ---------->DOF2   caattattcctctatgtgtcaataaagtatatttctcaaaaggaaaacaacaaaaatggttttcgatttcttgtactttcaaaaatagcataaaagccaa  19133900                                                                                  --------->AHL20(2)                                                                         <----------DOF2                                                                         ============================bZIP_DOF                                                                        ------>ZmHOX2a(2)                                                                       <---------RVE1(1)                                                                       <------ZmHOX2a(2)     <-------                                                                      <---------ARR11(3)     --------                                                                      --------->ARR11(3)   --------->ANAC46                                                                      --------->ARR14(2)   --------->O2                                                                      <---------ARR14(2)   --------->TGA1a                                                                      --------->ARR14(3)   ==========                                                                      <---------ARR14(3)   --------->bZIP60(2)             ---------->DOF2                                         --------->RVE1(1)   <---------ALFIN1       ------>ZmHOX2a(1)            <----------DOF2               ===================================bZIP_DOF ---------GLK1(2)                <-----------GT1                  ---------->DOF2----------->TBP   <-   tagattctcctctctcaaagtttcgccccttgtttttactttctctctcttaaaccccaaaaaaaaaaaaaagatcttttgctataaaatcccacttcac  19134000                                                                                               ------                                                                                --------->HSFB2a(2) --ZAT14       *TSS                                                             <---------HSFB2a(2) ->ZAT14     --------->MYB46(3)      <----------DOF2                     <----------DOF2--------->TOE2(3) =========bZIP_DOF             <----------DOF2                 --------->AHL20(2)  ---------->DOF2  < ---------DOF2----------->RAV1(1)    <---------DAG2  ----------->GT1   <---------At4g35610    <------   actttcttcacatcaacaacaaaacctctctctctttcactttctctctaaaaaccagaaaaaaaaaaaatggagctttcatcgagaaagccttatttca  19134100                                                                          --------->YAB1                                                                       --------->YAB1                                                                       -------->HAHB4     <---------ARR14(2)                               <----------DOF2             ----------->GT1----------->GT1 --------->ARR14(2)         >>>>>>>>>TBF1  <---------ANAC58       --------->ZAT2         <---------YAB1     <---------GLK1(1)      >>>>>>>>>TBF1     <---------ANAC58       <---------ZAT2    --------->YAB1 --------->YAB1    ---  <------ZmHOX2a(1)    ---------->ID1          <---------At4g35610  --------->YAB1       --------->GLK1(1) --->ATHB12       <---------ARR14(2)           --------->At4g35610 <---------ATHB51  --------->AtLEC2 ---------TOE2(3) --------->ARR14(2)--------->YAB1        --------->HSFB2a(2)   <-----------GT1------ ---AHL20(2)      --------->GLK1(2)<-----------------AGL1 <---------HSFB2a(2)--------->YAB1   -------   ttgaggaagaagaagaagagaatttggcttcttctttatcagaaatggaagctgggttttctggtaacaataataatagtaataaccatggaaatcccca  19134200                                                                                                    <                                                                                                   --                                                                                                   --                                                                                                   <-                                                                            <---------ICU4         <-        <---------MYB52(1)                                                  --------->YAB1         --      <---------ANAC46                                                <-----------GT1              <-      <---------ANAC58                                                --------->YAB1              <--      <---------ANAC58                                             <---------ICU4                 ---     <------NtERF2                                                 --------->YAB1               -----   --------->ALFIN1                   --------->AHL20(2)          <---------YAB1         <---------ANAC58 ------>MYB52(1)     <---------MYB52(1) <-----------GT1 <-----------HVH21  <---------ATHB12     ----- --->ANAC46     --------->ANAC46 <--------P      <---------TOE1(2)--------->ICU4         <---------ANAC58 -->LBD16     ---------->DOF2   --------->At5g28300<------ZmHOX2a(1) <---------YAB1   <---------MYB52(1)   aaacggtgtcgtttcttcaagccgtttctcttacggtagattaaacagtcttaggaacagtcagagttattattacaatcaatactctgtttcgtctccg  19134300           --------->HSFB2a(2)          <---------ANAC46       <---------ANAC46    <---------MYB52(1)  <-----------RAV1(1)             <-------TEIL ------>ZmHOX2a(2)               --------->ARR14(1) ------ZmHOX2a(2)               <---------GLK1(2) ------->ARR14(2)               --------->ARR14(2) ------->AGP1           --------->ATHB12                <---------ANAC46 --------AGP1           <---------ICU4                  <---------ANAC58 --------ARR11(3)      --------->ICU4                   <---------ANAC58 ------->ARR11(3)      <---------YAB1            --------->TOE2(3) --------ARR14(2)<---------ARR11(3)            -------->P                      --------->ANAC58 -------GLK1(1)  --------->ARR11(3)           ------->GAMYB                    --------->ANAC58 ------>GLK1(1) --------->HSFB2a(1)          --------->MYB46(3)      --------->ARR14(2) ---->HSFB2a(2) <---------HSFB2a(1)          <---------MYB111(2)     <---------ARR14(2) ---->LBD16<---------HSFB2a(2)  <---------ARR14(2)   <---------CCA1(2)   ------>ZmHOX2a(1)   agatctgttgtgtctggaagatttcatgatttcagattcgatattcaacaacctcatttcttggactcgtgtttcctctgtaagaaacctcttggtgata  19134400                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             <---------ARR11(3)                                     -                                             --------->ARR14(2)                                     <                                             --------->ARR11(3)                                     -                                <------ZmHOX2a(2)                                                   <                               <---------ARR11(3)                                              ------                               --------->AGP1<---------ARR14(2)                                ------                               <---------AGP1--------->AGP1                                    <-----                               --------->ARR11(3)                                             <------                  --------->ANAC46           <---------AGP1                                   -------                  ----------->GT1------>ZmHOX2a(2)<---------MYB52(1)                          <------                  --------->ANAC55(1)       <---------CCA1(2)                                 -------   acagagacatctacatgtacaggtaacatctaagatctataacatcagatctgttttttttttgttttctatcaatttctctcatttttagtcgaaatta  19134500  Previous    Next  AGI:  At5g47060.1    Description:  senescence-associated protein-related. similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT4G17670.1); similar to hypothetical protein 26.t00087 [Brassica oleracea] (GB:ABD65032.1); contains InterPro domain Protein of unknown function DUF581 (InterPro:IPR007650) Range:  from: 19134015    to: 19135273    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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