Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->ANAC58                                               --------->ANAC58                  <---------O2   <---------ANAC58      ----------->RAV1(2)                  ===============bZIP_DOF--------->YAB1<---------ANAC58                  --------->O2   <---------ANAC58      <---------ANAC46      <------MYB46(1)        <---------ANAC58  --------->ANAC46      <------MYB83--------->TGA1a--------------------->WRI1     <---------TOE2(2)       <---------ANAC58 ------>ZmHOX2a(1)    ---------->DOF2   <---------TOE2(3)     <---------TOE1(2)<----------DOF2   <---------ATHB12     <-------TEIL <---------ALFIN1 ----->ZAT14      <---------TGA1a<---------ANAC46      <---------ANAC58  --------->At4g35610      ---   gttctcgttggtaatcggagacgtcttttttgcttccttgaaatcatcctcgcaattgcctggtacatccaaagcagcactcagattaatgttagcgcct  19079600                                                                                                    -                                            --------->TOE2(3)                                       <             <---------AHL20(2)            <--------HAHB4                                          <-           <----------DOF2                 <---------ICU4                                          --      --------->ANAC46                     --------->ATHB12                                        <-      --------->ANAC58                    --------->ICU4                                        =====      --------->ANAC58  ---------->DOF2   <---------YAB1         --------->LBD16                -----      --------->ANAC55(2)               --------->YAB1       --------->ARR14(2)                 =====      <---------ANAC55(2)               <---------ICU4       <---------ARR14(2)             <-------- <---------ICU4    --------->ZAT18     <---------ATHB12   --------->AHL20(2)                --------- --------->YAB1<---------TOE2(3)----------->GT1      --------->TOE2(3)                      --------- ------>YAB1--------->AHL20(2)  <---------MYB46(3)  ----------->GT1   ---------->DOF2       <--------   tgataatcacgcgatttaatgttcgctaaagcagttgttaaatcatcattagcatcgttataaaatccgaggcaaagttttaagtcttccacaatatcct  19079700                 <------ZmHOX2a(2) -------->ARR11(3)  ------>ZmHOX2a(1)                      <---------At4g35610 ---------ARR11(3)------>ZmHOX2a(2)                      --------->ATERF1(1) --------CCA1(2) --------->GLK1(2)                       <------NtERF2 ------->GLK1(1)<---------ARR14(2)                       <-----------RAV1(2) --------GLK1(1)--------->ARR11(3)                      --------->At4g35610 ========================HOX2a_HOX2a                    --------->LBD16 ->ZmHOX2a(1)   <---------ARR11(3)                      <---------At4g35610 =======================HOX2a_HOX2a             <---------YAB1                      ------>MYB83 -ARR11(3)      --------->AGP1             <---------ANAC58--------->At4g35610      ------>MYB46(1) >ARR11(3)      --------->ARR14(2)         <---------ANAC58<------NtERF2          <---------MYB59 >ARR14(2)     <---------GLK1(1)          <-------TEIL  ------>NtERF2          <------ZmHOX2a(1) -ARR14(2)<----------DOF2         <----------DOF2     <---------LBD16 <---------DEAR3(1)   --------->HSFB2a(2)   gatatctctggtctttgagatcctgtgcaacgattcctttcaagttcgtgatttttgccgcagcggtcttcgtcgatgctaggaccaaactttcgagagt  19079800                    ------>ZmHOX2a(2)                  --------->ARR14(2)                  <---------AGP1                  <---------ARR11(3)             <---------ANAC46                                  <---------ARR14(2)           <----------DOF2                                     --------->ARR14(2)          <---------ANAC58                                  <---------ANAC46          <---------ANAC58                                  <---------ANAC58              --------->ARR11(3)      <----------DOF2                                       <---------ANAC58              --------->GLK1(2)     --------->ARR14(2)                                    <---------LBD16             --------->ANAC58     <---------ARR14(2)                               <---------YAB1                   --------->ANAC58    <------NtERF2 --------->ARR11(3)               ----------->HVH21             <---------ANAC58  <---------RAP2.6(2)                             --------->SPL7         ---------->DOF2 <---------GLK1(2)  <------NtERF2   <---------ARR14(2)        --------->GLK1(1)--------->LBD16  <----------DOF2 <---------LBD16 <---------CCA1(2) ----------->HVH21--------->YAB1<----------DOF2<---------ANAC58   agtcgcggctttgctttgtggatcttgtgtaagagaattgacgcagaaatcgtatgacaattgcgggtctttcgcaaaagctttcttgcaagaatcttga  19079900                   <---------ARR14(2)                   --------->ARR14(2)                <---------ANAC58                <---------ANAC58          --------->ARR11(3)--------->ARR11(3)              ---------            <-------GAMYB                 <---------ARR11(3)<---------ARR11(3)      <---------HSFB2a(2)           <---------MYB46(3)  ---------->DOF2    <---------ATHB12                  --------->HSFB2a(2)         <---------At4g35610<---------TOE2(3) --------->MYB46(3)                 <----------DOF2  ---   atgagagtttgagcggttgcgaaaccgtttaagaaaagagagaagataaccaatgaaaccaagaacttcattttttgttttcactttgagaagaagcaga  19080000                                                                            <---------YAB1                                                                          --------->YAB1                                                                         <---------TOE2(3)                                                                         <---------YAB1                                                                      <---------AHL20(2)                                                                     --------->AHL20(2)                                                 ----------->GT1     <---------AHL20(2)                                             <---------AHL20(2)   --------->AHL20(2)                                            <-----------TBP  --------->AHL20(2)--------->ICU4          --------->ATHB12                <---------------AGL15  --------->AHL20(2)       *TSS <---------WOX13(1)            --------------->AGL15  <---------AHL20(2)       <------------CBF                  ============================================================ >At4g35610<------------CBF              ----------------->AGL3--------->YAB1 <------------CBF  ----- ------->DOF2                           ------------>CBF ----------->GT1 <---------TOE1(3)     ------   gaaagttagaattgattgatgaaatttttggtcaccctgtgtttcaatttatagtaaaacagaaaaaataattttatggtaattgttgaaaatttggaaa  19080100                                    --------->AHL20(1)                                    <---------ARR11(3)                                <---------TOE2(3)                         --------------->AGL15                         <---------------AGL15                        ----------------->AG                     --------->ARR11(3)                        ----------------->AGL3  <---------AHL20(2)             <---------YAB1                        ----------------->AGL2  --------->AHL20(2)             --------->ICU4                        <-----------------AGL2 --------->AHL20(2)<---------ARR11(3)             -----                 <---------GLK1(1)  --------->ARR11(3)         ----------->ARR10 <---------GLK1(2) <-  ------------>CBF <---------YAB1  --------->CCA1(2)       --------->YAB1    --------->YAB1    <----- ========================================MADS_MADS<---------TOE2(3)      <---------DAG2   ------>ZmHOX2a(1) ---->DAG2      --------->ARR11(3)<---------ARR11(3)    <---------ICU4   <----------DOF2 --------->TOE2(3) ---->DOF2      <---------ARR11(3)--------->ARR11(3)    --------->YAB1<-----------GT1<----------DOF2   agttcccaatttgaaatagatatcattccatattgagatatattctacatttaatgaataatggtaagatagtcacttttcatgattctttcctaaattc  19080200                                                         ---------->DOF2                                                       <-------TEIL                                                     ------->MYC2                                                     <-------PIF5                                                     <-------MYC2                                                     ------->PIF5                                      <----------DOF2<-------MYC4                                   <-----------GT1  --------->ANAC58                                --------->ARR14(2)  --------->ANAC58                                <---------ICU4     <---------TOE1(2)   --------->AHL20(2)          --------->ICU4      <---------TOE2(2)   <---------AHL20(2)     --------->ANAC58         ------->TEIL  <---------AHL20(1)      --------->AtLEC2      --------->ANAC58  --------->AHL20(1)      --------->ANAC46      --------->ANAC58  --------->AHL20(2)      --------->ANAC58      --------->ANAC46  <---------AHL20(2) <---------WRKY38(1)     --------->ARR14(2)                      --------->YAB1 ---->YAB1           <---------WRKY12<---------ANAC58------->MYC3               <---------ATHB12 --------ICU4        <---------WRKY45<---------ANAC58<-------MYC3         --------->HSFB2a(2) --TEIL             --------->WRKY18(1)      <---------ARR14(2)           <---------HSFB2a(2)--------   ataatttatttgtttggaattggtcaacatgcaatatttgctttccatatacgcacgttcaaagtaattccattttctaaaaatcattcatactttcaaa  19080300                                                                              <---------ARR11(3)                                                                              <---------ARR14(2)                                                                <---------AHL20(2)                                                               --------->AHL20(2)              <-----   <---------ARR11(3)                                          <---------AHL20(2)              <-----   --------->ARR11(3)                                         <---------WOX13(1)   <-----------GT1  <---------GLK1(1)<---------YAB1       <---------TOE2(3)  <---------AHL20(2) --------->ARR14(2)<---- ->YAB1       --------->YAB1   ----------->RAV1(1)   <---------GLK1(2)       <---------CCA1(2) <-----   attgatatctcttctaccattatgctatttgaacaacattttaagaaaaatcaaagattatttgatttatttgttttccatatattcacaaatttagtca  19080400                                                                              <---------YAB1                                                                            <---------ICU4                                                                            --------->YAB1                                                                            <--------HAHB4                                                                           --------->ICU4                                                                           <---------YAB1                                                                         <---------ICU4                                   <---------AHL20(2)                   --------->ICU4                           --------->MYB52(1)                           <---------YAB1    <---------YAB1      --------->ANAC55(2)                           --------->YAB1 ----WRKY12             --------->YAB1             ---------->ARF1<---------MYB52(1) ----WRKY45             --------->ANAC46        <----------DOF2  <-------GAMYB--------->ICU4 -----DOF5.7(2)     --------->YAB1 --------->AHL20(2)           <---------ANAC46      <-------TEIL ----WRKY38(1)    <---------ARR11(3)<---------AHL20(2)     <---------ICU4--------->YAB1--------->YAB1   acgattgtgagtgtttccaaaatcatacataacagaaataaatgagaactcttttctcccattatgccgttgtcatcatcattatgcattcatcaacatt  19080500  Previous    Next  AGI:  At5g46960.1    Description:  invertase/pectin methylesterase inhibitor family protein. similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT5G46950.1); similar to seed specific protein Bn15D12A [Brassica napus] (GB:AAP37968.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 19079401    to: 19080007    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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