Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->YAB1                                           <---------AHL20(2)   --------->ARR11(3)                                        --------->AHL20(2)  --------->GLK1(1)                                    --------->TOE2(3)  <---------GLK1(1)                           --------->CCA1(2) <---------ARR11(3)                          <---------ARR11(3) --------->ARR11(3)            <------ZmHOX2a(1)    <---------GLK1(1) ------>DOF2    <------ZmHOX2a(1)            --------->ARR11(3)                    <-------TEIL   aaagatatcatcaaacgaggaattttaaaaacaggaatgaaatgtgagatatagaaatctcaatttaaaatgtgtaatctctaggcacatttgaaaccag  19057200            --------->TOE2(3)           ----------------->AG           ----------------->AGL1                                                       --------->ZAT14   --------->HSFB2a(1)                  --------->CCA1(2)<-------TEIL               <---------DEAR3(1)   <---------HSFC1(2)            <-------TEIL           <--------P                 --------->ZAT18   <---------HSFB2a(1)     <---------WRKY12          <---------TOE1(3)       <----------DOF2   --------->HSFC1(2)    <------ZmHOX2a(1)           <---------TOE2(3)--------->TOE2(3) <---------ZAT14   atggaaccttcttaccacaatggtttaggacaacgttcaaagaaatgggaacattaaggttgataccaagaacattagcctttagggcagtgcaaagaca  19057300             <------ZmHOX2a(2)                                                     --------->ANAC58            --------->ARR11(3)        ----------->RAV1(1)         --------->TOE1(3)--------->ANAC58            <---------ARR11(3)        ------------>AtMYB77 <------NtERF2           <---------ANAC55(2)      <----------DOF2               --------->ZAT18     <------NtERF2              --------->ANAC55(1)    <------NtERF2                  --------->ANAC58 <------MYB46(1)              <---------ALFIN1   <---------ATERF1(1)             --------->ANAC58 <------MYB83  --------->TOE2(3)--------->ANAC46   ------>NtERF2                  --------->ZAT18   --------->MYB52(2)     --------->ARR14(2)  <---------DEAR3(1)       --------->YAB1           <---------MYB46(3)     <---------ARR14(2)   ----- <---------At4g35610    <----------DOF2            <---------DEAR3(1)     ------>MYB83  <---------At4g35610 <---------LBD16     <---------ARR11(3)            <---------AtMYB61      ------>MYB46(1)       -----   gaccgcggcttcaagatcaactagacctttgataagagcgcaacagttggacgttggtggcagagaaaccttaaccaaatccaacacgttagcacatacc  19057400                                                                              <----------ARF1                                                                              <---------ZAT18                                                                           <---------MYB46(3)                                                                          <---------AtMYB61                                                                          --------->ALFIN1                                                                        <---------MYB46(3)                                                                       <---------DEAR3(1)                                                  <---------ANAC46     <---------AtMYB61                                                  <---------ANAC58    <-------GAMYB                                               --------->GLK1(1)      <---------ABI4(1)                                            --------->LBD16           <------NtERF2                                           <---------ANAC58          <---------DEAR4(2)                                           <---------ANAC55(1)       <---------MYB46(3)                                           <---------ANAC58         <---------DEAR3(1)                                           <---------ANAC46         <---------DREB2C(2)                                          <---------LBD16          <---------ABI4(1)                                      <---------ANAC46       <----------DOF2  --------->ZAT18     <--                                      <---------ANAC58     <------NtERF2--------->MYB55(2)        ---                        <------MYB46(1)<-------GAMYB  <-----------RAV1(1) <---------DEAR3(1)      <--                        <------MYB83  <---------bZIP60(2) <---------MYB46(3) <---------ANAC46     --- ---->TOE1(3)         --------->ALFIN1<---------ANAC58<---------AtMYB61--------->ALFIN1   --------->ZAT14 ---->TOE2(3) <----------DOF2  <------ZmHOX2a(1)  <---------ANAC58 <---------ORA47(1)     <---------ZAT14   ttaagtttaagagcgtctttacaagtgggtttaggagatggcgttgcgggtttcttgtggtggctcttgggcggtggtggtggacaagggactgaagtcg  19057500     ---------->DOF2                                                  ----------->GT1     <---------ZAT14                                   --------->ANAC58      ----------->GT1 -------At4g35610                                      --------->ANAC46     --------->DAG2 ------>At4g35610                             --------->YAB1        <------ZmHOX2a(1)          ------ -------ZAT2                      <------ZmHOX2a(1)    --------->ANAC58    ---------->DOF2     <----- ------>ZAT2    --------->At4g35610           --------->TOE2(3)  <------ZmHOX2a(1)<---------YAB1   agctgactaaagtgaagaagatgacattgaagatgaggagaagagcaatcttagaataagccatggaggaggaagtaaaaagttataagagtttgtttta  19057600                             *TSS                       <---------ANAC46                       <---------ANAC58                       <---------ANAC58                   <-------GAMYB                                           <------------CBF                   <---------ZAT14                                       --------->ARR11(3)                  --------->ALFIN1                                 <------------CBF                --------->ALFIN1                                   <---------GLK1(2)     ---------->DOF2 <---------ANAC46                            --------->ICU4    <---------ANAC46 --->HSFB2a(2)  <---------ANAC46  --------->ALFIN1    <---------YAB1   <---------YAB1 ----HSFB2a(2)<---------ANAC46 --------->GLK1(2)     <-----------TBP ----------->GT1        <--------   gaagttataaagcttgaggtgtgttgtgtgaagaatgtggagatggtcttagggtttttatagggcaaagattgtgatattggtgttgtatgttttcatt  19057700                                                                        <---------AHL20(2)                                                                        -------->HAHB4                                                                        <--------HAHB4                                                                        <---------ICU4                                                                        --------->ATHB51                                                                        --------->YAB1                                                                        -------->ATHB1                                                                     --------->YAB1                                                                     <---------ICU4                                                                    <---------YAB1                                                                    --------->ICU4                                                                   <---------AHL20(2)                                                                   <---------AHL20(1)                                                                   --------->AHL20(2)                 ------->GAMYB                             <---------YAB1                --------->MYB46(3)                       <---------ICU4<---------ATHB51               --------->ANAC58                          --------->ATHB12               --------->ANAC58                     <---------YAB1--------->YAB1           --------->ANAC58                       <---------ICU4 <---------YAB1           ------>ZmHOX2a(2)           --------->ANAC58<---------AHL20(2)    --------->ICU4<---------ICU4      --------->ATHB12      <---------O2 ------>MYB46(1)        <---------AHL20(2)  <---------YAB1      <---------YAB1      <---------TGA1a     <---------AHL20(2)     <---------YAB1--------->YAB1     --------->ICU4      ===================MYC_MYB          <---------ATHB51 --------->ICU4    --------->ANAC55(2)    --------->MYB52(1)    --------->AHL20(2)   --------->YAB1 --------->ICU4 <---------ANAC55(2)   ----------->HVH21  --------->AHL20(2)  --------->ICU4 --------->YAB1<---------YAB1   --------->ARR11(3)   ----------->TGA1------>MYB83    --------->At4g35610  --------->ICU4 --------->ICU4<---------WOX13(1) -YAB1--------->TGA1a<---------ATHB12     --------->AHL20(2)<---------ICU4<---------YAB1<---------ARR11(3)   acaaactgacgagaggcaaccaaatgaattaaatattagatgaaataattcatgatgaatgattattattataattattatgtattgattgatcttacaa  19057800                                                   ---------->DOF2                                      <---------AHL20(2)                                     <-------                                    --------->TOE2(3)                                  --------->ANAC58                                  --------->AHL20(1)      --------->ANAC58             --------->ANAC58                          --------->AtLEC2    --------->ALFIN1                  <-----------GT1                          --------->ANAC58  <---------ANAC46           --------->TOE2(3)     <-------                          --------->ANAC58<---------AHL20(2)      --------->TOE1(3)   --------->SPL7                     --------->ANAC46 --------->AHL20(2)  --------->ANAC58    <---------AHL20(2)   --          --------->TOE2(3)       <---------AHL20(1) <----------ID1   >>>>>>>>>MYB98 <---------MYB52(1)   cctgttaagaaacatcagtttgcacaacatgcaaaaaatattaattaagtggagaaagacaagcttatccctaacttaatttaaaccgtaagcaaataat  19057900             <---------ANAC58             --------->ANAC55(2)             <---------ANAC58                  <----------DOF2              --------->MYB52(2) --ATHB12    <---------ANAC55(1)       <----------DOF2                 <-------MYC3 --ATHB51    <---------ANAC55(2)    ---------->ID1  ----------->GT1    ------->MYC3     <-------TEIL ----->TEIL  <---------ANAC46<------------------------ANAC81  ---------->DOF2 <---------MYB52(1)   gcatttttggactatacgtgtaatgcaattcgatttttgttcttttcttctttgtggtaatatgcaaagcccatgtgttcgtttggaacgtccatgtgat  19058000                                          --------->MYB52(1)                --------->TOE2(3)        <---------GLK1(1)               ----------->GT1          <---------ARR11(3)              <---------TOE1(3)      <---------TOE2(3)              <---------TOE2(3)<---------YAB1    ----------->GT1                                  <--             <---------DOF5.7(2)  <---------YAB1 --------->YAB1                         <-------GAMYB          --------->YAB1<---------YAB1  --------->ARR11(3)                             ----------->GT1      --------->TOE2(2)<---------AHL20(2)--------->GLK1(1)              <---------YAB1 --------->MYB55(2)      --------->TOE1(2)<---------AHL20(1)--------->CCA1(2)  --------->DAG2             <---------MYB46(3)   <---------ARR14(2)<---------YAB1 ---------->DOF2        ---------->DOF2   <-----------GT1      ---   ttgagtaacctgtgataacgtttattattttttgtgattaaagatatcggatgataaatctaaaagttgatactataatttacaaatggtggttacacaa  19058100  Previous    Next  AGI:  At5g46900.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G46890.1); similar to extensin like protein [Ipomoea nil] (GB:BAF46299.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrophobic protein, helical; (InterPro:IPR013770) Range:  from: 19056928    to: 19057629    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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