Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------------AtSPL8                           ------->TEIL               --------------->AtSPL8                   --------->ANAC58     <---------ANAC58            --------->REM1(2)     --------->YAB1  --------->DAG2 ------->TEIL --------->ETT(2)   <-------TEIL    ---------->DOF2 <---------YAB1    --------->ANAC58     <---------ANAC58  <-------TEIL   atgaacattgtacttgtagacacactatgaacatattcatgagcgtgaacaaaaagtgagtacatatatgttttataacgaagagaattcaaattcaaag  19027500                                                                                      <----------DOF2                                                                                  <---------PCF2                                                                                <---------ZAT18                                                                                <---------DEAR3(1)                                                                             <---------ANAC58                                                                             <---------TGA1a                                                                             <---------ANAC58                                                            --------->YAB1   ========================                                                       <-----------GT1       <---------ANAC46                                                   <----------DOF2    --------->REM1(1)                                        --------->ARR11(3)  <---------ICU4   ====================bZIP_DOF                                        <---------ARR11(3) <---------YAB1    <---------MYB46(3)   <--        --------->TOE1(3) <----------DOF2          ====================================bZIP_DOF   <--    ---------->DOF2<---------GLK1(2)    <---------GLK1(2)--------->YAB1    <-----------HVH21<--------   actctctaaagcttaaaattcgattcttcttttgcaaaaatagattttgtatgcttttttcatcatagctctacatcggtcgtgggctctttcactttca  19027600                                                                                         --------->MYB52(2)          --------->YAB1                                   <------------------------ANAC81 ----------       --------------->AGL15                        <---------AHL20(2)                  <---------TOE1(2)       <---------------AGL15               --------->TOE2(3)<----------DOF2            <---------MYB52(1) ========bZIP_DOF                   <---------ZAT6<---------YAB1                     <---------ANAC58 -------DAG2<---------YAB1     <----------DOF2  <---------ZAT6   <----------DOF2     <---------ANAC58 --------DOF2            <---------DAG2  --------->ICU4  <-----------GT1          <----------DOF2 --DOF2<----------DOF2   <----------DOF2 <---------YAB1<-----------GT1        <-----------GT1      <-   cttttcattcttttataagtgaagacactttttctttagtgtcattcttagtattattttctcttttctttttattcattttccctttcgtttgtttttt  19027700                                        <---------ANAC46        <------ZmHOX2a(1)                                  --------->ARR14(2)  <-----------ARR10                                  <---------ARR14(2)  --------->GLK1(2)                                 ------>MYB46(1)      --------->ARR11(3)                                 ------>MYB83         --------->ARR14(2)  --------->YAB1              <-----------------AGL1  <---------ARR14(2) >ID1<---------ICU4           <-----------------AGL2 <---------ARR14(1)             <----------DOF2 ---------DOF2                ----------------->AGL2 <---------GLK1(2)        <-----------GT1   tctttgataatggttttaaaaatttagtccagaccaaatatggcctagaattagagaatcttgttaggatgaagttttattttcttctttggtcttacaa  19027800                                        --------->ANAC58                     <---------ANAC46   --------->ANAC58                  --------->bZIP60(1) --------->MYB52(1)                        --------->ARR14(2)                  <---------O2      --------->MYB46(3)   ----------->GT1        <---------ARR14(2)                  <---------bZIP60(1)--------->TOE1(2)--------->O2           --------->ANAC58                  --------->O2--------->ANAC58        <---------bZIP60(1)    --------->ANAC58               --------->ANAC46     <---------MYB52(2)--------->bZIP60(1)  --------->MYB52(1)           --------->CCA1(2)  --------->ANAC58        <---------O2  --------->AHL20(2)    <----------          <---------ARR11(3)  --------->ANAC46     --------->ANAC46 <---------AHL20(2) <---------ARR11(3)   aaactgaaacaagataaacgacgtcgtattacacacaaacaaacgaaaactaaacgacgtcgttaaatattaaaaaaaaacggaaacgagatttactagt  19027900                                                                                  <---------ANAC46                                                                                 <------NtERF2                                                                                ------>NtERF2                                                                               --------->DEAR3(1)                                                                               ----------->HVH21                                                                               <---------DEAR3(1)                                                                              --------->ATERF1(1)                                                                             ------>NtERF2                                                                             --------->LBD16                                                                             <---------ATERF1(1) <---                                                                            <---------DEAR3(1)  -----                                                                           <---------LBD16      -----                                                                         ------>ZmHOX2a(2)      -----                                                                        <---------GLK1(1)       -----                                                                        --------->GLK1(1)      <-----                                                                       --------->ARR11(3)      ------                                                 <---------ANAC58      <---------ARR11(3)      ------    <---------AHL20(2)                           <---------ANAC46  <---------At4g35610        <------    --------->AHL20(2)                           <---------ANAC58<---------HSFB2a(2)    <---------HSFB2a(1) -GT1             ------->GAMYB               <----------DOF2    --------->HSFB2a(2)   <-----------ARR10   ttggattttaatgggctcaacaggcccatactaaaccagtatgggcttctttcgtgctgcaactcatccagatgatctccggcgacgagtaccttcgccg  19028000  <--------ATHB1  <---------ICU4  --------->YAB1 <---------ATHB51 --------->ICU4                                                                                     - <---------ATHB12                                                                                ---- ---NtERF2                                                                                      <---- ->NtERF2                                                                                      <----- ---->LBD16                                                      --------->At4g35610           ------ ---->ANAC58                                                     ----------->GT1               <----- ---->ANAC58                                                    --------->ANAC58        ------->GAMYB ----ATERF1(2)          ------>ZmHOX2a(2)              <---------CCA1(2)               --------->MYB46(3) --->DEAR3(1)         <---------ARR11(3)         <---------ARR11(3)                  --------->MYB52(1) --->ATERF1(2)        --------->ARR11(3)         --------->ARR11(3)                --------->MYB46(3) ---LBD16     --------->REM1(2)           --------->GLK1(2)     --------->ANAC58<--------P     ------   gcaataatggtctctgtgtagatagatcgtgaagaagattagagaatcgaagaactcgtatcagataagctaaaatcaatgggtagccaacgacgaagat  19028100                                                                                            ---------                                                                                          <--------P                                                                                        <------MYB83                                                                                        <------MYB46(1)                                                                                        <---------MYB46(3)                                                                                       --------->MYB111(2)                                                                                       --------->MYB46(2)                                                                                       --------->MYB111(1)                                                                                       --------->MYB55(2)                                                                                       <---------AtMYB61                                                                                       <---------MYB46(3)                                                                                      <--------P                                                                                     <---------ANAC58                                                                                     <---------ANAC58                          ------>NtERF2                       ------>ZmHOX2a(2)      <-------GAMYB                         --------->ANAC46                    <---------GLK1(1)      <------MYB46(1)                         --------->ANAC58                    <------ZmHOX2a(2)      --------->MYB52(2)                         --------->ANAC58                    --------->GLK1(1)      <------MYB83                     ----------->RAV1(2)                    --------->ARR11(3)      --------->MYB55(2)                     --------->ZAT2                         --------->ARR14(3)      --------->ATHB12       <----------DOF2 <---------ATERF1(1)                  <---------ARR14(2)      <---------MYB46(3) ---------->HVH21    <---------ZAT2                         --------->ARR14(2)     <---------AtMYB61 -->ZmHOX2a(2)       --------->At4g35610          <-----------RAV1(2)             <--------P<-------- --ZmHOX2a(2)        <---------At4g35610    --------->At4g35610                 <-----------RAV1(1) ----ARR14(2)       <-----------RAV1(1)     <---------At4g35610               <---------ANAC58 --->ARR14(2)     --------->At4g35610       ----------->RAV1(2)        <----------DOF2<---------MYB55(1) ----ARR11(3)     ----------->RAV1(2)   --------->TOE2(3)   <---------ARR11(3)<---------ANAC46 --->ARR11(3)     <---------At4g35610  --------->ANAC46    <---------GLK1(1)  <---------ANAC58   cggtgatagctttgattttcatctgctgcgccatttcttctacctcatctgatcaggttagagatctccagtgcttcaattcgtgttggttggtagctct  19028200                                                          <------MYB83                       <----------DOF2         <-------TEIL                      ------>ZmHOX2a(2)        --------------->AtSPL3                   <-----------GT1          <---------TOE2(3)         --------->ATHB12      <------MYB46(1)           ------->TEIL          <---------TOE1(3)        <---------YAB1<---------SPL7            --------->GLK1(2) >At4g35610         <---------ARR11(3)       ------------------>SPL14     <---------GLK1(2) -At4g35610         --------->ARR11(3)<---------WOX13(1)<--------P        --------->ARR14(2)   ctgatacgatttagggttttttgatctttgaaaccttgtgattgcgatgttcgtacaggttggaacaaattatagagattctcatgaatttttcgattcc  19028300                                                                                       <---------ANAC58                                                                                       <---------ANAC58                  <---------ICU4                 <-------TEIL                  <---------HSFB2a(1)         ------->TEIL                    <-----------GT1                       --------->HSFC1(2)        <---------CCA1(2)                --------->ZAT6  ------>ZmHOX2a(1)     <---------HSFC1(2)   --------->GLK1(2)                   <-----------GT1  --------->TOE2(3)      --------->HSFB2a(1)   gatacaatctgtatctctgatcaatacattatggagtcttatttcactacatacacttccttagacgactcagagtttcgaaacttcttgcttcttcaac  19028400  Previous    Next  AGI:  At5g46850.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK96208.1); contains InterPro domain PIG-X/PBN1 (InterPro:IPR013233) Range:  from: 19027941    to: 19029237    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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