Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->YAB1     --------->ARR14(2)     --------->TOE2(3)     <---------ARR14(2)     --------->TOE1(3)         ------>MYB83    <------ZmHOX2a(1)     --------->ARR11(3)          ------>MYB46(1) --------->DOF2           <---------ARR11(3)        <---------MYB59                     <---------At4g35610 -------ATHB12           --------->GLK1(1)         --------->MYB46(3)                   --------->At4g35610 ->MYB46(1)              <---------GLK1(1)       <-----------GT1                     ------>ZmHOX2a(1) ->MYB83  <---------At4g35610          --------->TOE1(3)                            --------->TOE2(3) ---MYB59 --------->At4g35610          --------->TOE2(3)                         <-----------GT1   atcaaaggattcagaagacaatgagagaaatcttaacaaaacctgaaaatgtaaccaaactcaaactctaaaaacatgtcatttttcctcagttgtctct  19007600                                          --------->YAB1                                       >>>>>>>>>GATA-2                                       >>>>>>>>>GATA-3             <------ZmHOX2a(2)           ------                                       >>>>>>>>>GATA-4 <---------ANAC46                      --------                                       >>>>>>>>>GATA-1 ----------->GT1                      <--------         ------->TEIL --------->HSFB2a(2)<-------TEIL  --------->At4g35610       ----------->GT1    -        <---------CCA1(2)<<<<<<<ZML2   <---------ARR14(2)        --------->At4g35610      --------->WOX13(1)   gagaaagtttgaatcttttaatccctagaactcaaatggtggattcataagacaatgaggtgaaatcagatcaaaaacccagaaggaaaattcaatcaaa  19007700                          --------->ATHB12                        <---------WOX13(1)                    ------>MYB83                    ------>MYB46(1)                   --------->MYB52(1)                        --------->HSFB2a(2)                  --------->TOE1(2)                          --------->LBD16                  --------->TOE2(2)                          <---------HSFB2a(2)    <---------AHL20(2)--------->ATHB12                    <------ZmHOX2a(2)   --------->AHL20(2)--------->MYB46(3)             --------->At4g35610 <---------At4g35610   <---------AHL20(2)<---------ATHB12          <---------GLK1(1)---------->DOF2         ----------->GT1 ---->DOF2   <---------ANAC58              <---------ATHB12------>ZmHOX2a(2)        <---------AHL20(2) ->YAB1      <---------ANAC58        --------->ARR14(2)  <---------ARR14(2)        --------->YAB1 -ATHB12    --------->At4g35610      <---------ARR14(2)  ------->TEIL  --------->MYB52(2) ---------->GT1  --------->MYB46(3)  --------->GLK1(2)   --------->ARR14(2)--------->At4g35610  <----   agtgattaaatattagcttaccaacgattgattagagagaatccaatcgatatcagatggatccgagaaaggttagccgctcgaataaaaatgaaaaaaa  19007800                   --------->ANAC46                  <---------LBD16              <---------ARR14(2)              --------->GLK1(2)       <---------At4g35610       --------->At4g35610     <-------TEIL                            <----------ID1      --------->ZAT18  --------->ARR14(2)          --------->GLK1(2)                    ---------->DOF2         <---------ZAT18  <---------ARR14(2)--------->LBD16                    --------->At4g35610        <------ZmHOX2a(1) ------ID1    --------->ARR14(2)        --------->ANAC46  --------->AHL20(2)  ---------->DOF2     ---   aacaaatccagatgcgaatccacgggatagagattcagagacacaaaacgagtgatcagataaaatccaaaaagaaacaaaaaaggattcaagtggacat  19007900                                                 <---------TOE2(3)                                               ---------->DOF2                                            ----------->RAV1(1)                                            --------->TOE2(3)                --------->MYB46(3)          ------->GAMYB                                          <-          <----------DOF2                  --------->MYB46(3)                                      *TSS       <-----------GT1             --------->ANAC58        <----------DOF2                         --      <-----------GT1              --------->ANAC58  --------->ALFIN1                            <--- ------->DOF2 <-----------GT1      --------->ANAC46<------ZmHOX2a(1)   <---------ZAT14       --------   aaaagtttttaacttttaaccactcgaatggctatctacgacacaaccacaaaggatggagctttgcagagactgaagttttgtttgtttgttttgtctc  19008000                                          <------MYB46(1)                                          ----------->GT1                                          <---------MYB46(3)                                          <------MYB83                                         <---------DEAR3(1)                                         --------->MYB55(2)                                         <---------MYB46(3)                                         <---------AtMYB61                                        <--                                         --------->MYB111(2)                                     <---                                         --------->MYB46(2)          <-----------HVH21           <---                                         --------->MYB111(1)        <------MYB46(1)              <---                                        <---------MYB55(1)          <------MYB83                 <---                                        <--------P                 <---------MYB46(3)           <----                                       <-------GAMYB              <---------ANAC58             <-----                                      --------->MYB55(2)          <---------ANAC58            <------ --------AHL20(2)                     <---------MYB46(3)     <---------MYB52(1)        <----------DOF2 ------->AHL20(2)                    --------->ALFIN1    <------ZmHOX2a(2)           <---------At4g35610 -------DOF2                         <---------AtMYB61  <---------ARR11(3)           --------->At4g35610 -->ID1 <----------DOF2            --------->ALFIN1     --------->ARR11(3)        <------ZmHOX2a(2)--   tttaaattttctttaagagaaaacgtttttgttttaagtgtggttggtgaaaaatgaagatcagtttggctggtcagacgttcgatcagcttaatcggtc  19008100          <---------ANAC46          <---------ANAC55(2)   <---------ANAC46  <---------TOE2(3)  <---------TOE1(3) <---------DOF5.7(2) -----GAMYB                                        <---------ZAT2 ------DEAR3(2)                        <----------DOF2             <---------WOX13(1)               - ------MYB46(3)            <---------ARR14(2)      --------->At4g35610<---------ANAC58              < ---MYB46(1)               --------->GLK1(1)       --------->ZAT2--------->ATHB12                  <- ---MYB83<---------TOE2(3) --------->ARR14(2)<------ZmHOX2a(1)<---------At4g35610              ------ -----DEAR3(1)         <-----------RAV1(2) <---------TOE2(3)  --------->At4g35610            <------- ----ORA47(1)   --------->ALFIN1     <------MYB83  <---------At4g35610<---------ANAC58       <------- -----HVH21  ------->TEIL <------ZmHOX2a(1)<---------TOE1(3)  <---------ZAT2                 <------- ------->DOF5.7(2) <---------MYB46(3)<------MYB46(1)    <---------ANAC46      <---------YAB1<--------   ggttaacgtataacgtatgtgtggttcaggattccaatttggtttaaggattgagctggtttggagctgattgggtttctatgtttgaagatgggccgtg  19008200                           <------------CBF -------->ARR11(3)      --------->LBD16                            <---------CCA1(1) ---------ARR11(3)     --------->HSFB2a(2)                         <---------RVE1(1) --------GLK1(1)       --------->ANAC46                         <---------TOE1(3) --->ALFIN1            <---------HSFB2a(2)                      <---------TOE2(3)                <--- --ANAC46             <---------LBD16              >>>>>>>>>MYB98----------->GT1                 <--- --ANAC58       <---------ZAT2        ----------->GT1     <---------------AGL15               <------ --ANAC58 --------->At4g35610       <---------At4g35610 ------------>CBF <---------TOE2(3)   -------- -DEAR3(1)<---------At4g35610   <---------REM1(1) --------->MYB52(1)     --------->MYB59------------>CBF   gagttcttgttcagcccaagctcatccggaattgttgaagctgttataagcctaacaaaacaatataaggtattttaggtatgaaaataactcaattaac  19008300                                              --------->AHL20(2)                                              <---------ARR11(3)                                              <---------AHL20(1)                                          <---------AHL20(2)                                         --------->AHL20(1)                                         --------->AHL20(2)                               <---------ICU4 <---------AHL20(2)                              --------->AHL20(1)        <---------YAB1        <---------AHL20(1)<------------CBF                                 <---     <---------AHL20(2)  <---------AHL20(2)   --------->AHL20(1)                              <------ ------DAG2              --------->AHL20(2)   --------->ARR11(3) <----------DOF2              <------ -------DOF2          <---------ICU4     <---------AHL20(2)   <---------ARR11(3)    <---------YAB1  < -----GT1        <---------ZAT14         <---------AHL20(1)   --------->ARR11(3) <---------YAB1------ ->AHL20(2)      --------->ZAT14  <-----------GT1     ------------>CBF   ---------->DOF2    <--------   tttatattttatgaattagtttactaattaaaaatattactaatttaatatattgggtcaataagttcttttctcaaaagaatattatgaatggggtcaa  19008400         <---------ARR11(3)        --------->YAB1       --------->ICU4   <------ZmHOX2a(1)  <------MYB83                                                      <---------ANAC55(2)  <------MYB46(1)                                                   ----------->GT1 --------->MYB59                                              <---------YAB1  --------->TOE2(3) ------TOE2(3)                                                <---------AHL20(2)   --------->YAB1 ---WRKY38(1)                                                <---------AHL20(1)   <---------YAB1 ---WRKY12                                                 <---------TOE2(3)  --------->TOE1(3) --------P --------->YAB1                                  <---------YAB1     <---------DAG2      --- ---->DOF2<---------YAB1           <---------YAB1        <---------AHL20(2)<-----------GT1        <-- ---HVH21--------->ARR11(3)       --------->AHL20(2)<---------TOE2(3) --------->AHL20(2)<---------TOE2(3)   aggtaggaaatgatcatatggcatcaacatgaaaatttttatacaaaaacatttaagaattaatattattaagtaaattaccttataattaagaattttc  19008500  Previous    Next  AGI:  At5g46800.1    Description:  BOU (A BOUT DE SOUFFLE); binding. Identical to Mitochondrial carnitine/acylcarnitine carrier-like protein (BOU) [Arabidopsis Thaliana] (GB:Q93XM7;GB:Q9FIP5); similar to ATMBAC1, L-histidine transmembrane transporter/ L-lysine transmembrane transporter/ L-ornithine transmembrane transporter/ arginine transmembrane transporter/ binding [Arabidopsis thaliana] (TAIR:AT2G33820.1); similar to hypothetical protein OsI_033569 [Oryza sativa (indica cultivar-group)] (GB:EAY79610.1); similar to Os10g0573700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065471.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); con Range:  from: 19005858    to: 19007999    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g46810.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G46820.1); similar to hypothetical protein 25.t00048 [Brassica oleracea] (GB:ABD64955.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 19008391    to: 19010603    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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