Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------ZAT2                                                             <---------At4g35610                                                             --------->At4g35610                                                       --------->MYB52(1)                                                      ----------->HVH21                                                    --------->ANAC55(2)                                                    <---------At4g35610                                                  <-----------GT1                                         <-------TEIL ----------->TGA1 ->TEIL                                 --------->CCA1(2)   ------->TEIL                    --------- -->DOF2    ---------->DOF2       ------>ZmHOX2a(1) ----------->RAV1(2)                     <--------   ctaaaaattaagcctaaagagttcaaatttgtgttcctcaagattcaaagttttacctgacgaagctgatatgaacacctagacttcgatgaacagcaga  18988800                          <------ZmHOX2a(1)                        --------->ANAC58                        --------->ANAC58                        --------->ANAC46                  ===============HOX2a_HOX2a                 <------ZmHOX2a(2)                 ================HOX2a_HOX2a                <---------ARR11(3)                --------->ARR14(2)                --------->ARR11(3)                               --------->ANAC58                <---------ARR14(2)                             ---------->DOF2               <---------HSFB2a(1)                           <<<<<<<<<ARR2               <---------HSFC1(2)                        --------->ZAT14   ---------->DOF2       <---               --------->HSFC1(2)                    --------->ZAT6     --------->TOE2(3)      ------               --------->HSFB2a(1)             <---------HSFC1(2)--------->ANAC58          --------->YAB1      <-------TEIL------>ZmHOX2a(2)            <---------HSFB2a(1)      --------->TOE1(3)<---------ARR11(3) >At4g35610 <------ZmHOX2a(1)                <---------GLK1(2)--------->YAB1       --------->ANAC58 -At4g35610 =============HOX2a_HOX2a   <-----------RAV1(1)   <---------ATHB12      --------->ANAC58   acaatcgatgcataggaagatcccataaggaacagaagcccatgttggattcttcgcactacaatcaaagcaaacctaaaaaccgaagcaaaatcataaa  18988900                                      --------->ANAC58                                      --------->ANAC58                                <------ZmHOX2a(2)                                --------->CCA1(2)                               <---------AGP1                                                    <---                               --------->AGP1                                                  ------                               <---------ARR11(3)                                      <---------YAB1                        --------->At4g35610                                        <---------ARR14(2)                 <---------ANAC46------>ZmHOX2a(2)                             <---------HSFB2a(2)          --------->CCA1(2)    --------->ARR14(2)                              --------->HSFB2a(2)         <---------ARR11(3)    --------->ARR11(3)                       --------->TOE2(3) <---------GLK1(1)         --------->ARR11(3)    <-----------ARR10                  --------->TOE1(3)--------->ARR14(2) ------ATHB12--------->MYB59   <---------ARR14(2)                --------->ZAT6<---------LBD16 <----- --->WOX13(1)<---------TOE2(3)<---------CCA1(2)    ----------->GT1--------->TOE2(3)<---------GLK1(2)   tcaattcggaagatttaggtcgtataagctccagatctgaacgaaattcaaaatcgaaaattgagtaaccctaaccttgttctcggattttgatttcagc  18989000                                                                          <---------HSFB2a(2)                                                                          --------->HSFB2a(2)                                                                       <---------ARR14(2)                                                                       --------->GLK1(2)      -------                                                                       --------->ARR14(2)     <------                                                                  <---------LBD16          <---------ANAC46                                      --------->DEAR3(1)          --------->LBD16   ---------->DOF2                                     <------NtERF2          <---------HSFC1(2) --------->GLK1(2)                           --------->GLK1(2)                --------->HSFC1(2) <---------ARR14(2) -------DOF2              <---------GLK1(2)               --------->ARR11(3)  --------->GLK1(1)     - --->At4g35610          ----------->ARR10           <---------ZAT14   <---------GLK1(2) --------->ALFIN1 ----At4g35610 <---------YAB1      --------->RAP2.6(2)    <---------ARR11(3)  <---------GLK1(1)  <---   tttctgaaaacaacattcttatcggtgagattctcagtcgccatcgttgaagagtttagagatgtttccccagaatctggaaatctgaaagtggcgatta  18989100                                                              <---------TOE2(3)  <------ZmHOX2a(2)  ------>ZmHOX2a(2)                                          <-----------GT1     ------------>CBF -->ICU4                                                   *TSS                <------ZmHOX2a(1) ---ATHB51  <<<<<<<<<TBF1                          --------->TOE2(3)   --------->ATHB12 -------->ARR14(2)                             <---------MYB52(1)     <---------YAB1 ------TOE2(3)   ---------->DOF2<------------------------ANAC81--------->ANAC55(2)       --------->ZAT14   tggatcgactcttcttcttcaaagcagaaatttttgtttttgtttttctgttatcttatttgtttacgttttttgattagaggatcaatactaaactcga  18989200                <---------ICU4                --------->YAB1               <---------ATHB12                  <---------ANAC58               --------->ICU4                    <---------ANAC46        ---------->DOF2               <---------ATHB51          <---------ANAC58        <---------AHL20(2)           ------------>CBF              <---------ANAC58      <---------YAB1     <---------AtLEC2                    ----------->GT1      <---------AHL20(1)  <----------DOF2                        <---------ANAC46    <---------ICU4 <---------ANAC46              --------->ARR14(2)<---------ANAC58--------->AHL20(2) <---------ANAC58 --------->ICU4         <---------ANAC55(2)<---------YAB1      --------->ANAC58 <---------ANAC58 <---------YAB1         --------->ANAC55(2)--------->ICU4      --------->ANAC58   tgggcttgtatggcccaataatgaataagcccatatttgtatttcgtaatttcgtagatgtcattatttttatatgaaagtcacacaattctaaatcaaa  18989300                                                                                            ---------                                                                                         <-----------GT1                                                              --------->TOE1(3)     ----------->GT1                                                        --------->TOE2(3)           <------ZmHOX2a(1)                        ----------->GT1          --------->YAB1  ---------->DOF2   ----------->GT1          --------->YAB1------>ZmHOX2a(1)     --------->YAB1  --------->TOE2(3)    <----------ID1          --------->TOE2(3)                <----------DOF2    --------->YAB1    ---------->DOF2   tgtaaactctaaccatagtctaaatcctgtaaaaaacttctaattctttaatcacaaaacttaaccataaaacagaaaatgaaaaaggataaaacctcat  18989400                                                                                                 ----                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              -------                   <-----------GT1                                                           <-------              <---------ARR11(3)                                                             <-------            <---------YAB1                         <----------DOF2                           --------            --------->ICU4                        <---------ANAC46                           --------          <---------ICU4                        ------>ZmHOX2a(2)                            <-------          --------->YAB1                      --------->ARR14(2)                            <--------      <---------AHL20(2)               ---------->DOF2---------->DOF2                       ---------     --------->AHL20(2)      <---------YAB1   <---------ARR14(2)       ----------->GT1     --------->YAB1 >TOE2(3)<---------YAB1    ----------->GT1   <------ZmHOX2a(1)      <---------GLK1(2) >>>>>>>>>MYB2   cgctaaattttatcatgattttctccatcttgttattagcgcaaagaggatcgcttgaaagatgaagacagaattgtgaaaaattgaaaaccaaaataat  18989500 ------->GT1                                      <------MYB46(1) ---ICU4                                          <------MYB83 -->ATHB51                                       <---------TOE2(3)                  <----------DOF2 --ATHB1                             <---------TOE2(3)<---------ARR11(3)         <-----------GT1 ->HAHB4                             <---------TOE1(3)--------->ARR11(3)      <----------DOF2 --YAB1                        <-------TEIL <---------AHL20(2)              --------->HSFB2a(1) --AHL20(2)                <---------------AtSPL8--------->MYB59           ------->TEIL ->ICU4                 <---------TOE2(3)   <---------AHL20(1)         --------->HSFB2a(2)       <--- ->AHL20(2)             <---------HSFB2a(2) --------->AHL20(2)         <---------HSFB2a(2)  <-------- --ATHB51               --------->HSFB2a(2) --------->AHL20(1)       ------>ZmHOX2a(1)  <----------DOF2 -AHL20(1)        --------------->AGL15    --------->AHL20(2)  <---------ICU4<---------DAG2 --------- >AHL20(2)        ===================================================================================   tgttaaatccaaaaaatcgacttgttatggaagtacattaaggtattaaattaggttatcttcactaattcctctcgaaccttttactttctttcttttt  18989600                                           <-----------GT1                                         --                                          ----------->HVH21                                        <-                                        <---------ANAC55(2)                                  <-------                                        --------->ANAC58                                     --------   ----------->GT1                      --------->ANAC58                                     <-------  --------->DAG2                        ----------->GT1     <---------ANAC58                 -------- ---------->DOF2                        --------->ANAC55(2) <---------ANAC58             <---------RVE1(1) ------YAB1      <---------ANAC58       --------->ANAC55(1) <---------ANAC46             <---------CCA1(1) --DOF2          <---------ANAC58  ----------->HVH21      <---------ARR11(3)            --------->ARR11(3) ------>AGL15  <-----------GT1    <-----------HVH21  <---------YAB1                     <---------ARR11(3) =======MADS_MADS--------->ANAC55(2)  <---------ANAC46    --------->ARR11(3)          <---------ZAT6   tgataaagtaaaactttttacttgatacaatgtttctgtgacatgtaacatgtttatcaatgtcttgtaagaaaactggcaagaagtagagatattttat  18989700  Previous    Next  AGI:  At5g46750.1    Description:  AGD8 (ARF-GAP DOMAIN 8); DNA binding. similar to AGD8 (ARF-GAP DOMAIN 8), DNA binding [Arabidopsis thaliana] (TAIR:AT4G17890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63407.1); contains InterPro domain Arf GTPase activating protein; (InterPro:IPR001164) Range:  from: 18986976    to: 18989159    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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