Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     ----------->GT1                                                                               <---------AHL20(1)                                                                               --------->AHL20(1)                                                                               <---------AHL20(2)                                                                              --------->AHL20(2)                                                                              --------->YAB1                                          <---------ARR11(3)                 <---------YAB1                                          --------->ARR11(3)               <---------ICU4                                         --------->RVE1(1)                 --------->YAB1                                         --------->CCA1(1)                <---------YAB1        <----                                         <---------RVE1(1)                --------->ICU4       <-----                    --------->YAB1       <---------GLK1(1)              -------->ATHB1         ------                    <---------ICU4       --------->GLK1(1)              <---------ICU4     --------->AHL20(1)                   --------->ICU4        <---------CCA1(1)              --------->YAB1     <---------AHL20(1)                  --------->AHL20(1)    --------->ARR11(3)             --------->ICU4  --------->AHL20(2)            ----------->GT1   <-----------GT1                          <---------AHL20(2)  <---------AHL20(2) ------TOE2(3)   --------->YAB1         <---------ARR11(3)             <---------ATHB51<---------AHL20(2) >YAB1   --------->ICU4      --------->AHL20(2)       <---------TOE2(3)--------->AHL20(2)  --------->AHL20(2)   atgttatcgaaatgttgaaaaataatgaaatttaactatctagatatcttcaaattaagaaatatgtgtgtaaattattattatattgtttaatttatta  18967700                                -------->HAHB4       <----------DOF2          --------->YAB1                         ----------->GT1 --------->ANAC55(2)           <---------YAB1                       --------->ARR14(2)          ----- <---------ANAC55(2)           --------->ICU4                       <---------ARR14(2)          <---- -----AHL20(2)               --------->YAB1                      <---------ANAC46<---------ANAC58 ----AHL20(2)    --------->TOE2(3)                               <---------ANAC58<---------ANAC46 --->AHL20(2)    --------->TOE1(3)                               <---------ANAC58<---------ANAC58   aatacttatcttttactcaccttaaatacagtaatgataagaagagcataagaaaactagacacttagcgtatttgtaaatttgtgtgtcatttactcat  18967800                            <---------AHL20(2)  =====================================================                           --------->AHL20(2)   <-----------------AG                    <-----------GT1       --------------->AtSPL8                  <---------WOX13(1)   <---------ARR11(3)       <---------YAB1                --------->ATHB12       --------->ARR11(3)     --------->YAB1 ---->At4g35610--------->ICU4       --------->TOE2(3)   <------MYB46(1) -----At4g35610<---------YAB1      <---------ICU4       <------MYB83     >>>>>>>>>MYB2    --------->AHL20(2)   cttcccaaaattttcttatgattaactcattaaatcaacattatcttgtactcacatttggtaatcaaaattgaaaaccaatacactaattttaaaatat  18967900                                                                              --------->ICU4                             <---------WOX13(1)                          <---------TOE2(3)                 <---------AHL20(1)                                   --------->AHL20(2)                 --------->AHL20(1)                  --------->DAG2------>MYB46(1)                 <---------AHL20(2)                 ---------->DOF2------>MYB83--------->YAB1                 --------->ARR11(3)  --------------->AGL15        <---------------AGL15              --------->YAB1>>>>>>>>>ARR2         >>>>>>>>>GATA-1 --------------->AGL15              --------->AHL20(2)     <---------------AGL15       <---------MYB59              <---------AHL20(2)     =============================================MADS_MADS           --------->YAB1  --------->ATHB12 <---------TOE2(3)    --------->TOE2(3)         <---------DAG2        ----------->GT1   <---------YAB1    <---------YAB1      --------->ANAC55(2)        <---------    ---------->DOF2     <----------DOF2<----------DOF2----------->GT1 <---------AHL20(2)  <---------DAG2 ====================================================MADS_MADS<-----------GT1 ----------->GT1   actttcaaaagtgtaataatatatagctttgattgttttctcttttaagatagataaagtcaatatacctaatttaagaaatgataaatccacctttttc  18968000                                                                                 --------->TOE1(3)                                                                          <---------YAB1                                                                        <-----------GT1                                                                     <---------ICU4                                                                     --------->ATHB51                                                                     --------->YAB1                                                                     -------->ATHB1                                                                     <--------HAHB4                                                 <---------ARR14(2) <---------ATHB51            <----------DOF2                 ----------->GT1         <---------ATHB12            >>>>>   ----------->GT1                         <-------MYC3             --------->ICU4  ---------->DOF2 -DOF2<-----------GT1     <----------DOF2  ------->MYC3         ------------>CBF --------->TOE2(3)   tcaaatagttacttctttttcatataagctttattcagtttcacacatgtaaatctgtctctctctctcaattattaccattaccctaaatcccatcaaa  18968100                                             <----------DOF2                                            *TSS                                    ------->MYC3                                    <-------MYC3 ---------->ID1                                   --------->TGA1a                                   <---------TGA1a <----------DOF2                                   ===========================bZIP_DOF                           <----------DOF2--------->GLK1(2)                           <---------DAG2 ------->TEIL                     --------->YAB1=========================================bZIP_DOF          --------->YAB1   ==================bZIP_DOF        <-----------TBP <-----------GT1  <---------CCA1(2) >>>>>MYB80       --------->TOE2(3)=====================bZIP_DOF <----------DOF2                   >>   ccaaaaacatatttataaaacattaatcacttttcacacatgtgaatctttttctttttctgtctctctttaagttcaattctatttctctctctatttc  18968200                                                                             <---------AHL20(2)                                                                   --------->ANAC58         --------->GLK1(1)                                         --------->ANAC58<---------ANAC58   ------>MYB46(1)                                                 --------->ANAC46<---------ANAC58   --------->MYB52(1)                                            ---------->DOF2  <---------MYB46(3)   ------>MYB83                            <---------CCA1(2)   <----------DOF2  <---------WOX13(1) >>>>>>>>MYB80               ----------->GT1          ---------->DOF2 ----------->RAV1(1)   aaaccaaacagatttcaagaacacaaaaacagagttaaaactctcatctctcccaaaaaagatgcctttaagcaacaatgtaattggttgcataaacttc  18968300                                    --------->GLK1(2)                                    --------->ARR14(2)                                    <---------ARR14(2)                                   <---------GLK1(2)                                   <---------ARR14(2)                                  <------NtERF2                                 --------->LBD16                                --------->RAP2.3(2)                               <------NtERF2                               <---------LBD16                               --------->RAP2.3(1)                               --------->ATERF1(1)                              <---------ATERF1(1)                              <---------RAP2.3(1)                              <---------ERF1                              ------>NtERF2                              <---------RRTF1(1)                              <---------RAP2.6(1)                             <---------DEAR3(1)                             --------->DEAR3(1)                             <---------RAP2.3(2)                            --------->RAP2.3(1)                            --------->ATERF1(1)                           <---------ATERF1(1)                          <---------DEAR3(1)                       <---------WRKY38(1)<---------ANAC58                       <---------WRKY12   <---------ANAC58 --------->ZAT14                          -                      --------->WRKY18(1)--------->STY1(2) <---------ZAT18                          <          ------>ZmHOX2a(1)<---------RAP2.3(1)      <------ZmHOX2a(1)                              --         <---------ALFIN1--------->At4g35610--------->ANAC58             --------->ANAC58      ------       ------>ZmHOX2a(1) <---------At4g35610--------->ANAC58         <-----------HVH21        -------   --------->ORA47(1)<-----------HVH21   <---------STY1(2) <---------ZAT14                  ---------  --------->DEAR3(1)--------->LBD16--------->ARR14(2)   ----------->GT1  --------->ANAC58----------->GT1   atcaccgtcctcctctccattccggtcatcggcgccggaatctggctagccataggaacagtaaactcatgcgtcaagcttcttcaatggccagtaataa  18968400                               <---------TOE2(2)                               <---------TOE1(2) ----->ZmHOX2a(1)       <---------PCF2 ---------LBD16        <------MYB83  --------->ATHB12 ------->TOE1(2)       <------MYB46(1)                                         --------->ANAC55(2) <- --->YAB1        --------------------->WRI1                      <---------ANAC58              ------ -->ICU4       ------>ZmHOX2a(1)<---------MYB46(3)               <---------ANAC58         --------->AtLEC2 >YAB1<---------ZAT6  <---------MYB46(3)                    <---------O2---------->ID1    --------->ICU4   tcctcggagtcttaatcctcttagtgggtctcgctggtttcattggagggttttggagaatcacatggcttcttgttgtttacttaatcgccatgcttat  18968500                                             <---------------AGL15                                             --------------->AGL15                                             --------->YAB1                                            ----------------->AG                                            <-----------------AGL1                                            <-----------------AGL3                   <---------ANAC58         ----------------->AGL3                   <---------ANAC58 <---------AtLEC2             --------->HSFB2a(2)               <--------P         <-----------GT1                <---------HSFB2a(2)              <---------ANAC58    <---------AHL20(2)        --------->WRKY18(1)             <--------        <----------DOF2 --------->ETT(1)    ----------------->AGL1                          ---------        <---------DAG2 ---------->ID1       <---------YAB1 <-----------HVH21             <---------ANAC46 --------YAB1 <-------GAMYB   <---------AHL20(2)      <---------ARR14(2)           --------->ARR11(3) --->KAN4(2)  <---------ANAC58--------->AHL20(2)      --------->ARR14(2)          <---------CCA1(2)   tctcattgtacttttgggttgccttgtcggatttatttacatggttaccataagaggctctggtcatccagaaccaagtagagcttatcttgagtatagt  18968600  Previous    Next  AGI:  At5g46700.1    Description:  TET1/TRN2 (TETRASPANIN2). similar to TET2 (TETRASPANIN2) [Arabidopsis thaliana] (TAIR:AT2G19580.1); similar to unknown [Populus trichocarpa] (GB:ABK93187.1); contains InterPro domain CD9/CD37/CD63 antigen; (InterPro:IPR000301) Range:  from: 18968144    to: 18969856    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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