Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <-----------GT1                                --------->YAB1                            <---------YAB1                          <-----------GT1                                        <----------DOF2                      <---------TOE2(3)                <---------HSFB2a(2)      <---------ANAC58 --------->ALFIN1  <----------DOF2         ------>ZmHOX2a(1)        --------->ANAC46<---------ANAC58 ->WRKY12         <---------ANAC58<---------YAB1  ------->TEIL     --------->LBD16  <---------ANAC58 >DOF5.7(2)       <---------ANAC58<---------TOE2(3)    --------->HSFB2a(2)      <---------ANAC58   caagtgggagttttttttttgcttaatgttacaattaacattgtcctatatgaatttctggacatgttccccgtcttcgatggctttcgtccatctccct  18949000                              --------->SPL7    --------->ATHB51                                   --                            <---------SPL7      <---------ICU4                               --------                           ------>ZmHOX2a(2)    <------------ATHB5     --------->YAB1       ---------         ------->MYC3     <---------------AtSPL8<--------ATHB1--------->HSFB2a(2)           ---------         <-------MYC4     <------ZmHOX2a(2)    --------->ICU4 <---------HSFB2a(2)         --------->AHL20(2)         ------->MYC2    --------->ARR11(3)    <---------ATHB51       --------->AHL20(2)  --------->AHL20(1)         <-------MYC3    <---------ARR11(3)    <---------ATHB12  --------->YAB1          --------->YAB1         <-------MYC2---------->DOF2----------->GT1       <----------DOF2      ---------->DOF2   <---   tgttagaagcacatgtcaatagaaaaagatcgtacagagagtgaaaacaataattcaagactttctataacaataaatataaaaagaccaaaaataatat  18949100                                                                              <---------AHL20(2)                              ------------>CBF                     --------->YAB1                            <-----------GT1                    --------->AHL20(2) ------->ZAT6        <---------TOE2(3)                 <----------DOF2--------->AHL20(2)       ------ ->AHL20(1)    --------->AHL20(1)                    ------->TEIL >>>>>>>>>MYB98      --------->ANAC46 >AHL20(2)     --------->AHL20(2)               <---------AtLEC2 <-----------GT1--------->AHL20(2) >YAB1         <---------ARR11(3)     --------->At4g35610 ------------>CBF    --------->AHL20(2)<---- --------GT1   <---------AHL20(1)     <---------At4g35610<-----------GT1  ----------->TBP---------->DOF2   tacactataacatccaaaatattaacatataaaccaatttagctgtatttgaatggactttacaatttaacataatataaaaaaatatacccaaagttag  18949200                                                                                       <---------ANAC58                                                                                       <---------ANAC46                         <---------AHL20(1)                                            <---------ANAC58                         --------->AHL20(2)                                 <---------ATHB12        <---------WOX13(1) <------------CBF                              --------->MYB46(3)    <-----       <------------CBF  --------->AHL20(1)                   <---------AHL20(2) --------->MYB52(2)      --------->ATHB12   <---------AHL20(2)                  <---------AHL20(1)  <---------MYB46(3)     <---------YAB1     --------->AHL20(2)                   <---------AHL20(2) <---------TOE1(2)   - --->MYB52(2)    ---------->DOF2           <---------TOE2(3) --------->AHL20(2)<---------MYB52(1)---- ---GAMYB    ------>ZmHOX2a(2)       <----------ID1     ------------>CBF------------>CBF    <--------   ttgtattttgattgatcgcaaaagaaataaattgttgtgaagacaaaggtttgaagttggcaattttttttgtcaacaatcgttcgtttgcgttttgaat  18949300                                                                                          <---------DAG2                                                                                          -----------                                                                                          <----------                                                                                       ------>ZmHOX2a(1)                     <---------TOE2(3)                                             --------->ARR14(2)                  <---------AHL20(2)                                               <---------ARR14(2)                  <---------YAB1                                               >>>>>>>>>RAP2.2    ---            <---------TOE2(3)               --------->ANAC46                   --------->TOE2(3)  <-- ----WOX13(1)    --------->YAB1             --------->ANAC58                   --------->YAB1   <---- ---------->GT1<---------ARR11(3)           --------->ANAC58             --------->ANAC58============ ----->YAB1<---------DOF5.7(2)       --------->YAB1                      --------->ANAC58<----------- -YAB1   --------->DOF5.7(2)    --------->YAB1               >>>>>>>>>TBF1------------>CBF<----------DOF2   gatagtgaaacgataacgatattaatgtaaactatcaaattagaatacgacatctaagttgaagaagaatatcacaaacaatctaaatcctccttttttt  18949400                                                               <-----------GT1                                                  --------->TOE2(3)          <---------ZAT14                         <---------------AGL15 ---->AGL15                                       --------------->AGL15 -----AGL15    <---------MYB46(3)                <-----------------AGL3 ------>At4g35610                                <-----------------AGL2 -------At4g35610                                ----------------->AGL2 -------GT1 <-----------RAV1(1)   <------ZmHOX2a(1)<----------DOF2                   --------->TOE1(3) ==================================================================MADS_MADS         --------->TOE2(3) ------AGL3 <---------ANAC46   <------ZmHOX2a(1) <-----------------AG             <-----------GT1   agcagccatgagttctgtgggtgtatttcttaaggaggaaattgatggaaaaccttttttggtattcacattagcacaaacaaaaaaccttacctcttct  18949500                                                                                                <----                                                                                                -----                                                                                               ------                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                    <---------GLK1(2)                       <--------P  ------>MYB46(1)                      <---------ARR11(1)    <------                 --------->GLK1(2) ------>MYB83                        <---------CCA1(2)     <-------              --------->AHL20(2) --------->AtMYB61                    --------->LBD16  --------->TOE1(3)        --------->ANAC58         ------->GAMYB                 --------->ZAT2    --------->HSFB2a(2)        --------->ANAC58        --------->MYB46(3)             <---------ZAT2    <---------HSFB2a(2)   <---------ZAT18  <---------HSFB2a(2)               <-----------GT1--------->ANAC55(2)   <---------   --------->ZAT18  --------->HSFB2a(2)          <----------DOF2     --------->ANAC46  --------->TOE2(3)   agtggagcactagccataaattctggtagcgacaacctccctcttcaacctctttttttctgccctgcttcccgtatcaattttcagaacctcaacctta  18949600                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                         --------->ATHB12                                                                                       <---------WOX13(1)                                                                                      <---------ANAC58                                                                                      <---------AtLEC2                                                                                      <---------ANAC58                                                                                 ------>ZmHOX2a(2)                                                                                <------ZmHOX2a(2)                                                                               --------->ARR14(2)                            --------->AHL20(2)                                 <---------ARR11(1)                           --------->AHL20(2)                                  <---------ARR14(2)                 <---------ARR14(2)                                            --------->ARR11(3)   -     <------ZmHOX2a(1)------>NtERF2                                            <-----------ARR10    -  <------ZmHOX2a(1) <---------RAP2.6(2)                                        <---------AGP1 <------ -----LBD16     <---------HSFC1(2)                                             <---------ARR11(3)   - ---->SPL7      --------->HSFB2a(1)                                           <------NtERF2<---------WOX13(1) --->MYB52(1)   <---------HSFB2a(1)                                           <---------ARR14(1)   -- ---SPL7        --------->HSFC1(2)       <---------ICU4                       <---------CCA1(2)   --- --DAG2    <------ZmHOX2a(1)<---------AHL20(2)                 --------->At5g28300<----------DOF2---- ---------SPL14----------->ARR10        ------>ZmHOX2a(1)---------->DOF2---------->DOF2<----------DOF2   cggaggaggataaggagaagtttcggccatttaattcttctcctcatttcccaaacacaagaagcggtgatcagcaaggcggatctttgcttgattgcga  18949700                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                                  <-------TEIL                                                                               <---------ANAC58                                                                               <---------ANAC58 ------->P                                                                     <---------ANAC46 ----->MYB83              xxxxxxxxxxxxxxxx>smallRNA(i)                        <---------DEAR3(1) ----ID1              --------->ZAT14                    ------>ZmHOX2a(1)   --------->ZAT18 ----->MYB46(1)       <---------ZAT14             ---------->DOF2           --------->ALFIN1       -- --------->RAV1(1) <---------ANAC46           --------->YAB1<---------AGP1 <-------MYC3            <- ------>AtMYB61--------->At4g35610         ----------->RAV1(1)             ------->MYC3    --------->AHL20(2) ----->MYB46(3)<---------At4g35610<----------DOF2--------->YAB1----------->HVH21  --------->ABI4(2)--   ccaacatggtatatgtaagctccctgtagtccctctcttttggtgcaacaataaaagtcctagttctgacgaattcatgtgcggtgcatgcgaaaaaata  18949800    <---------At4g35610       <---------ZAT6    --------->At4g35610   <---------ZAT14       ---------->DOF2                             <--------  ---------->CDC5        >>>>>>>>>>>>>>>>>LFY--------->TOE2(3)                   <---------ALFIN1 ------->ZAT14     <---------ANAC58   --------->AHL20(2)           <---------ALFIN1       <---------ALFIN1 --------ZAT14     <---------AtLEC2   <---------AHL20(2)<---------ANAC58        --------->MYB46(3) ------->ZAT18     <---------ANAC58  --------->AHL20(2) <---------ANAC58    <------ZmHOX2a(2)   <----   gtgctcagcacaaactattttgcatgtctccagtgtcaaaaaaatttccataaagaatgcgtccagtctccacttgagatcaaacacccttcccacccct  18949900  Previous    Next  AGI:  At5g46660.1    Description:  CHP-rich zinc finger protein, putative. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G10370.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965) Range:  from: 18949408    to: 18950325    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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