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Intron region
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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                     <---------WOX13(1)
                                                                   --------->ATHB12
                                                                  <---------YAB1
                --------->AHL20(1)                         <--------ATHB1
                <---------AHL20(1)                         --------->YAB1
               --------->AHL20(2)                          -------->HAHB4
         ----------->GT1                                   <---------ICU4
       <---------YAB1                                     <---------YAB1
     -------->ATHB1                                       --------->ICU4
     <--------HAHB4                                       <---------ATHB51
     <---------ICU4<---------AHL20(2)                   --------->YAB1
     --------->ATHB51                                <---------ANAC55(2)           --------->YAB1
     --------->ATHB12    <-------TEIL                --------->ANAC55(2) <---------YAB1      <------
    --------->ICU4--------->AHL20(2)        ----------->GT1--------->ATHB51       --------->ICU4
 
acattgaattattagtaaatatataatatacataaaaactgattatgttgtaaatcacataataattgtatgattgaagattgaaatgataagcctatta  18922200
     <---------AHL20(2)                                 <---------ANAC58
     --------->AHL20(2)                        <---------MYB46(3)
    --------->AHL20(2)                         ----------->GT1
    <---------AHL20(2)                <---------YAB1    <---------ANAC46
    <---------AHL20(1)            --------->CCA1(2)     <---------ANAC58
    --------->AHL20(1)           <---------ARR11(3)  <---------WOX13(1)       --------->AHL20(2)
---YAB1     --------->WRKY18(1)  --------->ARR11(3)--------->MYB52(2)       ----------->GT1  -------
 
tcgaaaataaaattagtcaaggagaaaactttgaaagatatatgaatgagttgttaattgcttgtgcataagtgtgaacatgtaaataaacttttgaatc  18922300
             <----------DOF2
  <------MYB46(1)
  <------MYB83
 --------->MYB111(1)                                                              ----------->GT1
 --------->MYB59                                                     --------->WRKY18(1)          --
 --------->MYB46(2)                         --------->ANAC58 <----------DOF2 <---------ICU4    -----
 --------->MYB111(2)                        --------->ANAC58 <---------DAG2  --------->ATHB51  -----
<--------P<---------AHL20(2)    <---------ZAT18 --------->MYB59     <-----------HVH21          -----
>TEIL<-------TEIL    ----------->GT1 --------->ZAT14      <-----------GT1 --------->YAB1     -------
 
taggtaggtccatttactttggaattgttacatagaacacttcagacaagttatgtcttaatcactttatcggtcacccataattttgtaaaaaataaaa  18922400
                                                                                        --------->MYB46(3)
                                                                                   --------->ANAC46
        <------------MYB.PH3(2)                            ------>MYB83            --------->ANAC58
--------->RAV1(1)  <---------ICU4                          ------>MYB46(1)         --------->ANAC58
---->ANAC58       <---------YAB1       <-----------GT1   <---------MYB111(2)  --------->YAB1       <
---->ANAC46     --------->YAB1     --------->AHL20(2)    <---------MYB111(1)  <---------ICU4       X
---->ANAC58  <----------DOF2       <---------AHL20(2) <-----------GT1 ----------->TBP --------->AtMYB61
--->DOF2--------->MYB46(3)   <-----------GT1 <---------ATHB12<----------DOF2 <-------TEIL  ---------
 
gccacattctaacaaacttttataattccattttacatttatatacaaatcaatattctaccaactttgtgctataaatattcatcacaccacaaccatt  18922500
         -------->P
         ------>MYB83
        --------->MYB55(1)
       <---------MYB111(2)
       <---------MYB59
       <---------MYB111(1)                                                                    ------
       --------->MYB46(3)                                                                     <-----
       <---------MYB46(2)                                                     --------->TOE2(3)
       --------->AtMYB61                                                      --------->TOE1(3)  <--
      --------->MYB46(3)                           --------->ANAC58      <---------ICU4       ------
 --------->ANAC46                                  --------->ANAC58     <---------ATHB12 <---------HSFB2a(2)
---------ALFIN1                        <-----------GT1            <------ZmHOX2a(1)      --------->HSFB2a(2)
XXXXXXXXXXXXXXXXXX>MIR394A/B <---------ATHB12      *TSS          ----------->GT1   <---------ATHB12
>MYB46(3)------>MYB46(1) ------------>CBF   <----------DOF2     --------->MYB59------>ZmHOX2a(1)<---
 
caacactctaccaacctcttctaatttctacaatcactctcttaactctttgctaagcacttcttgttaggaaaaatcattccttaatcactctcgaagc  18922600
                                                                                --------->AHL20(1)
                                                                                --------->AHL20(2)
                                                                               --------->AHL20(2)
                                                                               <---------AHL20(2)
          <-----------GT1                             <---------DAG2           --------->ICU4
        --------->YAB1                                <----------DOF2          <---------ATHB51
       <---------ICU4                              <-----------GT1        --------->ANAC46
 --------->ANAC46                               --------->MYB111(1)       --------->ANAC58
--->HSFB2a(1)                                   --------->MYB46(2)        --------->ANAC58
----HSFC1(2)                                    --------->MYB52(2)   <---------------AtSPL3
---------HVH21         --------->REM1(1)      <---------MYB52(1)     --------------->AtSPL8
--->HSFC1(2)     ------>ZmHOX2a(1)       <---------ARR11(3)          <---------------AtSPL8<--------
-------DOF2     --------->TOE2(3)        --------->ARR11(3)       <---------YAB1<---------AHL20(2)
 
tttcacaccaatattacttccttactacatctcttcattttaaagatttgttagttactttttttttttgttattgtacgaaataatttgttttctttca  18922700
                                                                                 --------------->AGL15
                                                                                 <<<<<<<<<<<<<AGL25
               ---------->DOF2                                                   <---------------AGL15
            --------->ANAC58                                                    <-----------------AGL2
            --------->ANAC58                               --------->ARR14(2)   ----------------->AGL3
         ---------->ARF1                      <-----------GT1            ---------->DOF2     <------
     <---------ANAC58                      --------->AHL20(2)        --------->HSFB2a(2)   <--------
     <---------ANAC58              <---------ANAC58        <---------ARR14(2)   <-----------------AGL3
--DOF2  <-----------HVH21          <---------ANAC58  <----------ID1  <---------HSFB2a(2)  <---------GLK1(2)
 
gacaatgttcttgtcacacaaagaatacaatcgacttgacttgcaattttttctaaacaacaaatccagcatcgagaaaagtttctatttttggattttc  18922800
                                                         <----------DOF2
                            --------->ANAC58            <---------DAG2  --------->ANAC58
                            --------->ANAC58            --------->TOE2(3)
                  <---------ANAC58              --------->AHL20(2)      --------->ANAC58     <------
                  <---------ANAC46            <---------ARR11(3)     --------->STY1(2)       <------
    <-----------GT1         --------->ANAC46  <---------GLK1(2)      <---------STY1(2)       <------
-----GT1          <---------ANAC58<-----------GT1    <-----------GT1--------->ANAC58      <---------
-GLK1(1)         <-------TEIL    --------->CCA1(1)  <-----------GT1 --------->ANAC58    <----------DOF2
 
caaatattaacagttatagcttcgtgacttcaagaaatatccatttcaagattatttaacctttttttgtctagcaagtcatcgtattctactttgttgt  18922900
                                           <---------LBD16
                                          ------>ZmHOX2a(1)                     --------->DAG2
                                         --------->TOE2(2)           <---------ANAC55(2)
                                --------->LBD16                      <---------ANAC58    <---------ARR14(3)
---REM1(1)                    <---------LBD16                        <---------ANAC58    <---------ARR11(3)
-----RAV1(1)                --------->ARR14(2)       --------->ARR11(3)        ---------->DOF2
---MYB46(3)   <---------ICU4<---------ARR14(2)       <---------ARR11(3)   ---------->DOF2--------->ARR11(3)
--RAV1(1) <-------TEIL  --------->LBD16  <---------SPL7              <---------ANAC46  <---------TOE1(2)
 
tgcaaatgggaagttcatgtttacctccagggttccggtttcatcctacggatgaagaactcatcgaatattacttgaaaagaaaagtcgaaggtctcga  18923000
                                                                                                ----
                                                                               <---------ARR11(3)
                                                                               --------->ARR11(3)
                                                                               --------->GLK1(2)<---
                                                               <---------AHL20(2)               <---
                             <---------YAB1                    --------->AHL20(1)               <---
                            <----------DOF2                    <---------ARR11(3)       <---------TOE2(3)
                           ------>ZmHOX2a(2)                   <---------AHL20(1)      ---------->DOF2
                         --------->ARR11(3)              ----------->GT1  <---------HSFB2a(2)   ----
                  <-----------TGA1                     <-----------RAV1(2)--------->HSFB2a(2)  -----
                  <-----------HVH21                  -------->P--------->ARR11(3) <---------------AGL15
                 --------->ANAC46        <------ZmHOX2a(2)     --------->AHL20(2) --------------->AGL15
    <----------DOF2      <---------ARR11(3)         <-----------GT1 <-----------GT1   <---------AHL20(2)
 
gattgagcttgaagtcattcccgtcatcgatctttatagtttcgatccttgggagttaccaggtaatatattaacttccaaaaatctatttaaagtatta  18923100
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AGI:  At5g46590.1   
Description:  ANAC096 (Arabidopsis NAC domain containing protein 96); transcription factor. similar to ANAC071 (Arabidopsis NAC domain containing protein 71), transcription factor [Arabidopsis thaliana] (TAIR:AT4G17980.1); similar to nam-like protein 11 [Petunia x hybrida] (GB:AAM34774.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441)
Range:  from: 18922552    to: 18924075    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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