Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------CCA1(2)                                              <---------AHL20(2)                                              --------->YAB1          <-----------GT1                                              --------->AHL20(2)<---------AHL20(2)                                             <---------YAB1   <---------AHL20(2)                                           --------->YAB1    --------->AHL20(2)                                           <---------ICU4    <---------AHL20(2)                                          --------->ICU4     --------->AHL20(1)                 -----                    <-----------GT1       --------->AHL20(2) <---------AHL20(1)                 <----            --------->ANAC58              <---------AHL20(2) --------->ARR11(3)         <---------WOX13(1)            --------->ANAC58         --------->At5g28300--------->AHL20(2)         --------->TOE2(3)        <---------REM1(1)           ----------->GT1     <---------AHL20(2)   <---------AHL20(2) -----       <---------TOE2(3)   <---------YAB1 <---------ATHB51   <---------ARR11(3)  <-----------GT1<----   cacaaaattgatgtaagctatttaacatgtttattgaactgtaaataattatatctgttttaatatattttttaactattttttttcttaattgatattt  18911200                                                                 --------->TOE1(3)                                                                 --------->YAB1                                                                 --------->TOE2(3)                                                               <---------ARR11(1)                                                               --------->ARR14(2)                                                               <-----------ARR10                                                               <---------ARR11(3)                                                              <---------ARR14(1)                                                              <---------CCA1(2)                                                              ------>MYB46(1)                                                            <---------MYB59                                                      <---------ICU4                                                      -------->ATHB1                                                      --------->ATHB51         --------->ATHB51     -        --------->ZAT6                               <---------AHL20(2)        --------->ATHB12    --      <-----------GT1    <----------DOF2             <---------ATHB51         <---------YAB1       <- ---->AHL20(1)        <---------AHL20(2)             --------->ICU4   --------->ZAT6  <----------DOF2 -----AHL20(2)        <-----------GT1                --------->AHL20(2)     <--------HAHB4       <--- ---->AHL20(2)   <---------YAB1                ----------->GT1------>MYB83  --------->YAB1  --------- -----AHL20(1)------>ZmHOX2a(1)         <-----------HVH21<-----------GT1   <---------YAB1  <---------GLK1(2)   tattgtattaacactccttcttattaactttgcaaaataaactgtcatcttgtaaattattaccaaatcttaacactattattattgactttagaatcta  18911300           <---------ICU4           --------->AHL20(2)                  <---------AHL20(2)          --------->AHL20(2)               <----------DOF2     --------->TOE2(3)                 --------->YAB1     <---------MYB59                  <---------YAB1              --------->CCA1(2) -------->CCA1(2)               --------->AHL20(1)               --------->ARR11(3) ------->ARR11(3)               <---------AHL20(2)               <---------ARR11(3)            ------ --------ARR11(3)               --------->AHL20(2)             <---------TOE2(3) ---------->DOF2<---- ------TOE2(3)       <----------ID1 --------->YAB1   <---------TOE2(3)   --------->TOE2(3)    <------ >GLK1(2) <---------AHL20(2)   --------->AHL20(2)  <---------AHL20(2)   <---------ICU4        -------   agatatacctaaataatttcttaaggccaaaaaaaaaattatcatctttttatttaagttaatctaagatataaacattaagagaaagttgcaaaattaa  18911400      <---------ARR11(3)      --------->ARR11(3)     --------->RVE1(1)     --------->CCA1(1) --------->AHL20(2)    --------->CCA1(2) ---->DOF2            --------->ARR14(2) -----TOE2(3)     <---------LBD16                                                                <--- ---AHL20(2)     ----------->RAV1(2)                   ---------->DOF2    ----------->GT1        ---- -->AHL20(2) <----------DOF2         <----------DOF2 <---------YAB1   <---------TOE2(3)    <---------   agaaaaaatatctatctttacctggatacaaaacttatacttttggataattcatatgaaagtctctcttctaatgtagtaaaaacttctacatttcaca  18911500                                                                                                 <---                                                                                                 <---                                                                                            <--------                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)                                                                                         <---------ARR14(2)                                                                                         <---------ARR14(3)                                                                  --------->ARR11(3)     --------->ARR14(2)                                                              --------->YAB1             --------->ARR14(3)                                <---------ZAT14             --------->ANAC58             --------->ARR11(3)                           <---------ANAC46                 --------->ANAC46             <---------ARR11(3)                           <---------ANAC58          --------->ARR14(2)                 --------->RVE1(1)                           <---------ANAC55(1)       <---------ARR14(2)    ----------->GT1<---------RVE1(1) ------At4g35610           <---------ANAC58      --------->DAG2   <---------ARR11(3) ---------->DOF2 ----->At4g35610   <---------AHL20(2)           ---------->DOF2   --------->GLK1(2) --------->AHL20(2) --HVH21          --------->AHL20(2)       <------ZmHOX2a(1)--------->ANAC58        <---------AHL20(2)   gctaaaaactgaaacccaaatttaaaatttcgtgtatagtaccgaggaaaaaaagtatttgcaagcaaaatctagagcagaaaaatttaaagatcttttg  18911600                                                                           <----------DOF2                                                                          ------>ZmHOX2a(2)                                                                         <------ZmHOX2a(2)                                                                        <---------ARR14(2)                                                  <---------DAG2        --------->ARR14(2)                                                  <----------DOF2       <---------ARR11(3)                             *TSS <---------AHL20(2)                    --------->AGP1  --------->ANAC55(2) <---------ANAC58          <---------At4g35610     <---------AGP1 ------ANAC58         <---------ANAC58       --------->At4g35610        --------->ARR11(3)         <- ------ANAC58       <-----------GT1 <-----------GT1                    <---------CCA1(2)   --------->STY1(2) --DOF2    <------------CBF--------->TOE2(3) <---------At4g35610   <-----------GT1         <---------STY1(2)   cttcacatgactctattgtttttttcttacctctattttttcaagtctgcagctttttgaagctatatttttcagatctttcactctctctctagctact  18911700                                 --------->AHL20(2)                            <---------AHL20(1)                            <---------AHL20(2)                           --------->AHL20(2)           <---------GLK1(2)                           <---------AHL20(2)          --------->At4g35610                       --------->AHL20(1)              <---------ZAT2           --------->ANAC58           <---------TOE2(3)--------->AHL20(2)         <---------At4g35610      --------->ANAC58       <----------DOF2 --------->AHL20(2)           ------>ZmHOX2a(1)           --------->ANAC46     ---------->ID1    <---------AHL20(2)        ------>NtERF2            --------->GLK1(1)       >>> ---------DOF2        --------->AHL20(2)   <---------At4g35610    ---------->DOF2    <---------ALFIN1   tctttttgtctttaagttttcaaattttattaaatttttatattctactgcctcctcagcttctctcacaaagcacaaatccaagccccaaatcaaatcc  18911800                                                      <---------ANAC58                         <-----              --------->TOE1(3)              --------->RVE1(1)           <----------DOF2     --------              --------->TOE2(3)             --------->GLK1(2)           ------>ZmHOX2a(2)   <--------           <-----------GT1           ----------->RAV1(1)              --------->ARR11(3)--------->ARR11(3)       --------->AHL20(2)         --------->ANAC46    <---------ANAC58<---------ARR11(3)<---------ARR11(3)       <---------AHL20(2)  --------->ZAT6   <---------ARR11(3) <<<<<<<<<SARD1           <---------AHL20(1) >>>>>>>>>>>>>>LFY        --------->ZAT18   --------->ARR11(3) <<<<<<<<<CBP60g          --------->AHL20(1)   caccattgttttattacctcaatccaagaacactagacacaacaaaaatctctgtttcttatccaaatttctgatctttgtggagaacaatattttgatt  18911900                                                                                              -------                                                                                             --------                                                                --------->ZAT2             --------->YAB1                                                                --------->At4g35610        -------->HAHB4                                                                <---------At4g35610  <---------ANAC55(2)                                                            <-----------HVH21        --------->ANAC55(2)                    <-----------GT1                        --------->WOX13(1)        ----------->GT1                <---------MYB46(3)                    <---------YAB1                --------->MYB59 ----WOX13(1)  <--------P                           <---------At4g35610            <-----------RAV1(2) ->ATHB12     <---------ANAC58        <-----------ARR10   ------>ZmHOX2a(2)      --------->GLK1(2) -YAB1        <---------ANAC58--------->ARR14(2) <---------At4g35610    <---------MYB52(2)--------->ICU4   ggatgtgagacaaatgggttgtttacattccaaaactgctaatcttccttcttctgatgatccatcagctccaaacaaaccagaatcaggtaataatact  18912000                                                                                                   <-                                             --------->ARR14(2)                                 <----                                        ----------->GT1                                        <-----                                  <---------ZAT18             <---------DEAR3(2)         <-----------RAV1(1)                                <---------At4g35610       <---------ANAC58          <---------AHL20(2) -->YAB1--------->GLK1(2)       --------->At4g35610       <---------ANAC58        <----------DOF2  <- ->ZAT6<---------GLK1(2)   <---------YAB1    <---------ARR14(2)          <XXXXXXXXXXXXXXXXXXXXXXXMIR405A/B/D   aatctcttagattctaaaaaactcacattttgtttgctcacttagtaaatctgcagtttttcgtctgttcttgttatgggtttgctttaatttgtggggt  18912100  Previous    Next  AGI:  At5g46570.1    Description:  protein kinase family protein. similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G59010.1); similar to hypothetical protein OsJ_031257 [Oryza sativa (japonica cultivar-group)] (GB:EAZ17048.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83954.1); similar to hypothetical protein OsI_033551 [Oryza sativa (indica cultivar-group)] (GB:EAY79592.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:I Range:  from: 18911629    to: 18914633    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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