Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <--------HAHB4                                                                             <---------YAB1                                                                       <---------ANAC46                                                                      <---------MYB46(3)                                                                      --------->MYB52(2)                                                                      <------MYB46(1)                                                                      <------MYB83                                                                     <---------DEAR3(1)           ---  <---------AHL20(1)                                                 <---------AtMYB61            --- ------->YAB1           --------->YAB1                           <---------TOE2(3) --------->At4g35610 ------->AHL20(2)       ----------->GT1   <---------At4g35610  ----------->HVH21   <---------At4g35610 -------ATHB12 --------->ZAT6             --------->At4g35610<----------DOF2 --------->ICU4       ---   ataatatatgtcttcttactctaaaattgtaatttctcaaatttagctacaaaaccagtctatctttgacgttggtggtattattagctcattaacacac  18877300                                                                                                    <                                                                     --------->REM1(2)             --                                               ---------->DOF2    <---------ANAC55(2)        --------           ------>ZmHOX2a(1)         --------->ARR11(3)           <---------ANAC46  <---------ARR14(2) ------>ANAC58                       --------->GLK1(2)            >>>>>>>>CAMTA3    --------->ARR14(2) ------>ANAC46        --------->MYB52(1) ---------->DOF2 <---------YAB1          --------->HSFB2a(2)- ------>ANAC58     --------->CCA1(2) <---------ARR11(3) <---------TOE2(3)       <---------LBD16<-----   acacaaaaatgtccttgttggatataacgacgattcaaaaatctaaagacaaagaattgacgattaacgcgtgaagaagacttggggaaccgcatcagtc  18877400  <----------ID1 ----------->GT1 ---------------AtSPL8     ---------->DOF2 -------->DOF2      <---------ANAC58 ->WOX13(1)         <---------ANAC58                <-----------HVH21 -------->DAG2  <------------CBF   --------->MYB46(3)                 ---------->DOF2          ------ ----------------WRI1 ----------->HVH21 ----------->GT1      <---------ANAC46     <------------CBF   aaaaagtacaaagactagtattgagtgaccaaagtcaacaaatagtaaatgttctgtcaagttgcatataagaaaagtctgagaaattgctactaaacca  18877500                                                  <---------At4g35610                                                  --------->At4g35610             --------->RAP2.6(3)                                           <---------YAB1                        ------>NtERF2                                    --------->AtMYB61             <---------TOE2(3)  <------NtERF2                  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->ATERF1(2)       <---------ATERF1(1)                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------ANAC46          --------->DEAR3(1)     <----------DOF2             <-----------GT1 <-----------RAV1(1)       --------->MYB52(1)       < --->AtMYB61     xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  ------>NtERF2<---------TOE1(3) ------>NtERF2   <   cactatgctttcgcacaaaaaaaaaaaaaaaaaaaaaaccacactatgctagtgctgcctgcaaatttagggtttcttaacgacgacggcaacgcttctt  18877600                                                                                     <---------HSFB2a(2)                                                                              <---------ANAC58                                                                     <---------------AGL15           <---------WOX13(1)                                        --------------->AGL15          <------------CBF                                          <-----------GT1  <---------LBD16         --------->ATHB12                                           <-----------------AGL2        <---------YAB1                                              <-----------------AGL3      <---------At4g35610                                       <----------DOF2      --------->HSFB2a(2) ----------DOF2                                         <-----------GT1       <---------ANAC58      < ---------DAG2                  <---------ARR11(3)   <---------ICU4 <-----------------AGL1    <------   cacttttcttctgattgcattctcagtatcaccaggtcttaagttgttcttctcaaaattacattccttttctctatatggcttcttctcggaattgggt  18877700                    <---------LBD16                    --------->At4g35610                    <---------At4g35610                  <-----------RAV1(2)              --------->ZAT2                                                    <---------MYB52(1)           --------->LBD16                       --------->ANAC46              <-----------HVH21          --------->HSFB2a(2)                 --------->TOE2(3)                --------->LBD16 ---------YAB1<---------ZAT2--------->At4g35610------>ZmHOX2a(1)     <------NtERF2               ---- ---ANAC46<---------HSFB2a(2)           <---------GLK1(2)         --------->At4g35610  <----------DOF2   ttatgatgtcttcccgagcttcagcggaacagatgtccgtcggaatttcctcagccacttgctcaaggggctgcataaatccgtcaattctttcagagac  18877800                                                                                          ------>NtERF2                                                        <---------HSFB2a(2)              --------->ANAC46                          <------ZmHOX2a(2)             <---------HSFC1(1)          --------->ARR11(3)                  <---------ATHB12                      --------->HSFC1(1)      ---------->DOF2     -            --------->ANAC58                            --------->HSFB2a(2)   <---------HSFB2a(2)   <            --------->ANAC58                         --------->GLK1(2) <---------ANAC58  --------->ANAC58 ----->AtMYB61  --------->WOX13(1)               <---------TOE2(3)     <---------ANAC58  --------->ANAC58   caaaacatggagagaagccaatcactcgatcccatgcttaaacaggcgattagggattctagaattgctctggtcgtgttctcaaagaactacgcctctt  18877900                                                                                                -----                                                                                               <-----                                                                                              =======                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              =======                                                                                              =======                                                                                            ---------                                                                                           <---------                                                                                        ------>ZmHOX2a(1)                                                            <---------YAB1            ------>ZmHOX2a(2)                                                     <---------WRKY12                 --------->HSFC1(2)                                                     <---------WRKY38(1)              <---------HSFB2a(1)                  <-----------RAV1(1)               <<<<<<<<<<WRKY26                  --------->HSFB2a(1)        <----------DOF2                             <<<<<<<<<<WRKY43                  <---------HSFC1(2)        --------->TOE2(3)                           <<<<<<<<<<WRKY38                 <------ZmHOX2a(2)      ------>NtERF2                               <------MYB83                      <---------ARR14(2)   --------->At4g35610      ----------->GT1       <------MYB46(1)  ==========================HOX2a_HOX2a  --------->ALFIN1<---------MYB46(3)              ----------->GT1  ------>ZmHOX2a(1)--------->ARR14(2) -------->ZAT2  <---------At4g35610              --------->MYB59   =========================HOX2a_HOX2a ---------ZAT2  --------->At4g35610      <------ZmHOX2a(1)----------->GT1 <-----------GT1  ----------   caagctggtgccttaatgagctgttggagattgtgaaatgtaaggaagagtttggtcaaatggtgattcctattttctactgtttggatccttcccatgt  18878000                                                                                                    - ---->ALFIN1                                                                                 <------- ------HVH21                                                                                 -------- ======================================bZIP_DOF                                              <------- ---TGA1a                                 <---------ANAC58                                   <------- ---O2                   <---------ARR11(3)                                              <---------WOX13(1) -->TGA1a ----------->GT1--------->ARR11(3)                                            <---------WRKY18(1) -->O2   <---------DEAR3(1) <----------DOF2--------->LBD16                            --------->WRKY38(1) ===============================bZIP_DOF  <---------ANAC46                            ----------->HVH21 ==========================bZIP_DOF       <---------ANAC58                            --------->WRKY12 ------>AGL15        ---------->DOF2     <---------LBD16                              --------->WRKY45 --------AGL1   <----------DOF2       <---------ANAC58        ----------->GT1        --------->DOF5.7(2) ------->AG--------->At5g28300        <---------ANAC58    <------ZmHOX2a(1)    ---------->DOF2      <   gaggcatcaagacggtgactttggaaagaactttgaagagacttgcgggagaaatacagaggaagagaaaattcaatgggagaaagcgttgactgatgtc  18878100 <-----------ARR10                                                                                  < --------->ARR14(2)                                                                           ------- --------->GLK1(2)                                                                     -------------- <---------ARR14(2)                                                                    <------------- -------->GLK1(1)                                                                     <---------ANAC58 --REM1(1)                                                                            <-------------- ->bZIP60(1)             <---------ANAC46                                             <-------------- --bZIP60(2)             <---------bZIP60(2)                                          <---------ANAC46 --bZIP60(1)          ----------->HVH21                               <---------YAB1  <---------ANAC58 ---------CCA1(2)    <-----------HVH21    --------->ANAC46          <---------ANAC46  <--------------   gcaaatctcgctgggtttgattctgtgacctggtatgcttctatacatcagtaatttgtgatttcatttatcgtgaatgagcgtagtttcttgtttgggt  18878200  Previous    Next  AGI:  At5g46510.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46260.1); similar to ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G46270.1); similar to ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G46520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16326.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domai Range:  from: 18877678    to: 18884240    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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