Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------GLK1(1)        --------->GLK1(1)       <---------ARR11(3)                                                           --------->TOE2(3)       --------->ARR11(3)                                                    --------->AHL20(1) ------>CCA1(2)                                                              <---------AHL20(2) ------ARR14(2)                      <-----------ARR10                       <---------AHL20(1) ----->ARR14(2)                     <---------CCA1(2)                        --------->AHL20(2) ----->ARR11(3)       --------->AHL20(2)                               <-----------GT1 ------ARR11(3)----------->GT1<---------GLK1(1)                    <---------ARR11(3)               - ----->ARR10<----------DOF2   --------->GLK1(1)                    --------->ARR11(3)               <   atttgaaaagatttctttagttaaaaatatagaaatccaaatctcatggttttagatggaatttgaaaagattttacaataaattacatcaacttcccta  18873300          --------->YAB1                                                                           --     <---------AHL20(2)                                                                        <-----     --------->AHL20(2)                                                                       <------   <---------YAB1                                                                            --------  --------->TOE2(3)                                                <---------ANAC58         <-------- --------->ATHB12                                                  <---------ANAC58    <---------AHL20(2) <---------ICU4                                               <---------ICU4         <----------DOF2- --------->YAB1                                              ------>ZmHOX2a(1)       --------->TOE2(3) -------->ICU4                       <---------ICU4    --------->ANAC46       <---------YAB1<-------- ---------ATHB12                    <---------ATHB12 <-----------GT1 <---------MYB52(1)--------->AHL20(2)   aaatcattaaaatcatataaaaccccagtaaaactcaaatcattctttgtccaatacaccctcctaatttcgttttgtttatgaatactttaatttgatt  18873400 ----------->GT1                                                      <---------AHL20(2) -------->DOF2                                                        <---------ATHB51 ----WOX13(1)                                              --------->AHL20(2) ------CBF           --------->MYB52(1)                   --------->YAB1               ------------>CBF ->ATHB12          <---------MYB52(2)                    --------->AHL20(2)        --------->AtMYB61 -AHL20(2) <---------MYB46(3)                        <---------AHL20(2)         <-----------GT1 -------->DAG2   ---------->DOF2                     --------->AHL20(1)      <---------GLK1(1) -YAB1 <----------DOF2      >>>>>>>>>TBF1            --------->AHL20(2)--------->MYB52(1)   gaaaagtaacttttggttacaaagaacgaagaagaaaacatttgattttaaaaaataaaataaaaatacaaaataatggatttcaccaaaacaatataca  18873500                --------->GLK1(1)           ---------->DOF2          <---------AHL20(2)        <---------ZAT14             <---------MYB52(1)          --------->AHL20(2)        --------->ZAT14           <---------ZAT6                        -     --------->At5g28300            --------->ZAT18           ----------->GT1           <---------AHL20(2)    ----------->GT1    ------------>CBF                  --------->YAB1  <---------YAB1--------->AHL20(2)    ------->GAMYB      <---------ATHB12           <-----------GT1  <---------YAB1    --------->ARR11(3) --------->MYB52(1)   --------->ANAC46  --------->ICU4--------->ANAC46<----------DOF2<---------ARR11(3)   aaataacggtaataaaagagttccaaacaatctaatactgtactgatgagatttacccataatactgttattcttttgattttaaaagatttattttcta  18873600               <----------DOF2            --------->ZAT6                                     --------->ANAC58          <-----------GT1                                      --------->ANAC46       --------->YAB1                                          --------->ANAC58     --------->ARR11(3)                                   --------->At4g35610     <---------ARR11(3)                                --------->At4g35610    --------->YAB1                                     <---------At4g35610   <---------YAB1                                    <-----------RAV1(2)   <---------TOE2(3)                             <------MYB83 --------->SPL7          ---------->ARF1   <---------TOE1(3) ----------->GT1             <------MYB46(1)        ------>ZmHOX2a(1)  <---------ALFIN1 -------->AHL20(2) ---------->DOF2       ----------->GT1 --------->RAP2.6(2)   --------->YAB1 <------   aatttaagataataacactttaaaagtaatttgccactgaaacttgttatttggttcagccgcttacgcccttcctggctatgatgttgtctcccacttt  18873700              --------->ANAC58              --------->ANAC58              ----------->GT1            <-----------RAV1(2)           --------->At4g35610    <---------ALFIN1                                  <---------PCF2           <---------ZAT2  <---------ARR14(2)                               --------->ZAT2<---------AHL20(2)           <---------At4g35610   <---------REM1(2)                <----------DOF2<-----------RAV1(1) --------->ANAC58          ------->TEIL                      <------ZmHOX2a(1)   --------->ALFIN1 --------->ANAC58          --------->ARR14(2)        <---------ARR11(3)     <---------ZAT2---------->DOF2 ----DOF2  --------->ZAT2 <---------CCA1(2)          --------->ARR11(3)<-----------GT1   --------->AHL20(2)   gacgagccattgcagcaggctaaaatgtgtatccctacacatttctaaactgaaacatcttgaggacgctttgtttccagcttgtggggcattaaatcga  18873800           --------->ARR14(2)           <---------ARR14(2)         <---------MYB46(3)            --------->YAB1                                          ------      <---------ANAC58                 <---------ICU4                                        <-------      <---------ANAC46        <---------At4g35610                ------>ZmHOX2a(1)  <---------LBD16      <---------ANAC58        --------->At4g35610               --------->TOE2(3)  <---------LBD16     --------->ATHB12      ---------->DOF2            ------>ZmHOX2a(1)         <---------GLK1(1)   gttgaattgagtggttcttctagtgggatgaaagcagacaatattgacacagcctcctcttctcttcctcaagtcgaacttgatttcagggagtgcttca  18873900                    --------->REM1(1)                  ------>ZmHOX2a(1)          --------->GLK1(2)       --------->LBD16      --------->HSFB2a(2)      <---------HSFB2a(2)          --------->AHL20(1)     ------>ZmHOX2a(2)             <---------AHL20(1)     ====================HOX2a_HOX2a    =====================HOX2a_HOX2a                                                      <---------At5g28300    <------ZmHOX2a(2)              <---------AHL20(2)         ---------->DOF2             -------->P   --------->ARR14(2)             --------->YAB1           --------->LBD16           <-----------GT1   <---------ARR14(2)          --------->WOX13(1)         --------->LBD16     --------->YAB1 <------- --->REM1(1)<------------AtMYB77  --------->AHL20(2)      <---------LBD16  --------->bZIP60(1) ---DOF2 <---------GLK1(2)  --------->GLK1(2)<-------TEIL<---------LBD16   <---------bZIP60(1) ------   acttggatccagaaactgtccttcaccaagaatcaattatattcaagtacatgttatttccagggaaagaagaagtgccatcatatttcacttaccgtac  18874000                                                                        <---------ANAC46                                                                       <------NtERF2                                                 <---------ATHB12     <------MYB83                                    ------>MYB83 --------->MYB46(3)   <------MYB46(1)                                    ------>MYB46(1)                  <---------DEAR3(1)                                  --------->DEAR3(1)                 --------->ALFIN1                                 <---------At4g35610                <--------P--------->YAB1     ----     --------->ATERF1(1)         --------->At4g35610               <-------GAMYB       <---------ZAT6 --------->ZAT14        ------>ZmHOX2a(1)       -------->P       <---------TOE1(3)    <---------TOE2(3) --SPL7       ----------->HVH21<-----------GT1  ------>MYB46(1)  <---------TOE2(3) <---------MYB52(2) --->SPL7 ------>ZmHOX2a(1) --------->ANAC46    ------>MYB83 --------->CCA1(2)----------->GT1 <------   tactggagtctcctctctgaccattcctctacttcacctccctctctcccaaccattcttcagatttagggttggcgcattggtaactaatgttaagcat  18874100                                                                                           --------->ANAC46                                                                                           --------->ANAC58                                                <----------DOF2                            --------->ANAC58                                              --------->At4g35610                    <---------DAG2           ----------->GT1          --------->CCA1(2)                                <----------DOF2        ---------->DOF2            <---------ARR14(2)                          <-----------GT1   --------->AHL20(2)              --------->ARR14(2)             --------->ATHB12<-----------GT1 ------->GT1                       <---------GLK1(2)       <---------ANAC46   <---------CCA1(2)------ ---AtLEC2<---------TOE2(3)    <-----------------AG  <-----------RAV1(1)   --------->TOE2(3)  -------   ggaaaaaatataaaggtaaaatgtgagttcaaagacagatttgggaacagctttcatgttggctcggatgatttctacgtttatctacttttcacgaaaa  18874200  Previous    Next  AGI:  At5g46500.1    Description:  similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46260.1) Range:  from: 18873681    to: 18875014    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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