Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ICU4             --------->YAB1                                         --------->GLK1(2)    --------->ANAC55(1)                                            <---------GLK1(2)    --------->ANAC58                                               <---------ARR14(2)    --------->ANAC55(2)                                            <---------ARR11(3)    <---------ANAC55(2)                             <---------ARR11(3)    --------->ANAC46                       --------->ARR14(2)    ----------->ARR10    ----------->GT1                        <---------ARR14(2)--------->ANAC58          <----------DOF2    --------->ANAC58                    --------->ANAC58     --------->ANAC58          -------------- ---------->RAV1(1)                 --------->AtMYB61<---------RVE1(1)       <---------ANAC58 ------->ANAC46<---------YAB1      --------->ANAC46 --------->ARR11(3)       <---------ANAC46 -YAB1      <---------YAB1       --------->ANAC46   <---------GLK1(2)  <---------YAB1 <---------ANAC58 >ICU4   --------->ICU4        <-----------GT1   <---------WOX13(1)--------->ARR14(2) <---------ANAC58 ------------->TaNAC69(2) <---------ZAT6--------->ANAC58   ---------->DOF2   <---------ANAC58     <--   cacaacaggtaactattatgactccttggtgttatacaccacaaggatttgatagattttttaaagcaagattctcatggtgtgttttgctttggatttt  18851500                                                                           <---------ZAT2                                                                           --------->ZAT2                                                                           <---------At4g35610             <---------ZAT14                                       <---------At4g35610        <---------At5g28300            ---------->DOF2            <---------ARR11(3)   <------ZmHOX2a(1)           <-----------ARR10---------->DOF2   --------->ARR11(3) ------->WRI1--------->ZAT14   --------->ARR11(3)                xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ---------GT1--------->REM1(2) <---------ARR11(3)           <---------ZAT14--------->At4g35610     --   tcacaggacttactgtgcagagattgctcacaatatctcaacaaagaagagaaaggccatagtggagagagcttctcagctagacgttgttgtttccaac  18851600            <---------ANAC55(2)            <---------ANAC46            --------->ANAC55(2)            <---------ANAC58            <---------ANAC58           <-----------------------TaNAC69(2)        <---------ANAC58        <---------ANAC58       <------MYB46(1)       <------MYB83       <---------MYB46(3)      --------->MYB111(1)      --------->MYB46(2)      --------->MYB59                         --------->GLK1(1)                             <--------      <---------AtMYB61                       <---------GLK1(1)                             ---------     <---------MYB55(1)                      <---------ARR11(3)               <---------DOF5.7(2)     <--------P                              --------->ARR11(3)             --------->DOF5.7(2)   <------MYB46(1)                         xxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------MYB52(1)    <--   <------MYB83                 ---------->DOF2--------->ARR11(3)         <---------ANAC46  <-------- ------->ZAT2        <------ZmHOX2a(1)   ---------->DOF2        <----------DOF2        --------->LBD16   aagcttggtaggttgcgtagccaggaagacgagtgaaagccctaaaagatatcatctagggtttttcttttatctgtcgttaactattccgaattatctt  18851700                           --------->ALFIN1                         --------->ALFIN1                <----------DOF2          <-----------GT1               <---------ANAC46      <---------ARR11(3)                <---------AHL20(2) <------------------------ANAC81     --------->ARR11(3)               --------->AHL20(2) ---GT1        <---------ANAC58     --------->YAB1                --------->ARR11(3) >ARR11(3)     <---------ANAC58   <---------WOX13(1)              <---------ARR11(3) --------DOF2 ---------->ID1 --------->At4g35610                 --------->YAB1 -ARR11(3)   <-----------GT1<---------MYB46(3)                  <---------YAB1 --------->GLK1(2)   cttttttttttttttttgcgttttggagagtggctgaatgatattacaacttgggttctcgtttttatgatattaattcagaatcagacacagtctcaga  18851800           ------>ZmHOX2a(1)           ------------>CBF                                                                         <          --------->TOE2(3)                                                                         <    --------->AHL20(1)                                                                              -    <---------AHL20(1)                                                                          <----    <---------AHL20(2)                                                                         <-----    --------->AHL20(2)                                                *TSS                    ------- --------->ATHB51     <---------MYB59                              <-----------GT1          <<<<<<<<<MYB98 --------->AHL20(2)   --------->TOE2(3)        <-----------GT1 <----------DOF2    ----------->GT1 <--   ccataatttattcctcaatttatacctaaattttcagaccatcgaaatttaacttgagttcaaaacttttatcgatactgccaagtgtaactaagttagg  18851900                                                                                                  ---                                                                                                  <--                                                                                            ------->MYC3                                                                                            <-------MYC3                                                 ---------->DOF2                           --------->ANAC55(2)                            <----------DOF2   <---------HSFB2a(2)                          <---------O2 ---------ZAT2         <---------ANAC58       --------->HSFB2a(2)                          --------->O2 ---------At4g35610    <---------ANAC46   --------->WRKY38(1)                              <---------ANAC55(2) -------->At4g35610    <---------ANAC58 ------->MYC3                                       <---------ANAC46 --ZmHOX2a(1)  --------->ANAC58         <-------MYC3                --------->TOE2(3)      --------->TGA1a ----YAB1      --------->ANAC46        <---------O2               <-----------ARR10        --------->ANAC46 -->MYB59    <---------ALFIN1          --------->O2               --------->GLK1(2)        <---------TGA1a -------GLK1(1)--------->ANAC58      <---------ALFIN1            <---------GLK1(2)      ------>ZmHOX2a(1)   atagctgagagagacacactccatttcgtgctttaatccccacgttgtccagaaagactcgatgagagaatctcaatcttgttccatctcctcacgtgag  18852000                       <-------TEIL                      --------->CCA1(2)            --------->ATHB12         --------->AHL20(2)           <---------YAB1     <------ZmHOX2a(1)   <---------ANAC58                                 --   --------->REM1(1) --------->ARR14(2)           <---------ANAC58                            ------- -------->GT1        <---------ARR14(2)           <---------ANAC46--------->ANAC46          <------ZmHOX2a(1) -------MYB46(3) <---------LBD16     <---------AHL20(2) ------->TEIL                  <---------REM1(1)   tcgttacaccaagatgatttggggatacacgaggaacaaaaaattagttgatgcgttgaatctgttcgacgaaatgcctgagagagagatgtaaggagat  18852100                                                                                               <-----                                                       <-------GAMYB                  <------NtERF2                                                      <---------MYB46(3)             ------>NtERF2                      <-------TEIL     <-----------RAV1(1)         <---------ANAC46 --------->ANAC46 ----->TEIL        <------MYB46(1)   <----------DOF2 <---------AtMYB61              <---------DEAR3(1) -->At4g35610      <------MYB83<---------DEAR3(2)  <-----------RAV1(1)              --------->DEAR3(1)   gaatgtagttgctgtgaagctaggttcaagggtcgattcctttgtggctaattctgtggttgtgatgttcagtggaaacatgaacgacgccgtttcagtg  18852200                                                                                     <-----------HVH21                                                                        <---------DAG2       ------>NtERF2                                                            --------->DAG2        <---------ANAC46                                                      <---------HSFB2a(2)         --------->ANAC55(2)                                                      <---------------AGL15       <---------ANAC58---                            --------->O2              --------->HSFB2a(2)         <---------ANAC58---                   ------->TEIL                <---------TOE1(2)        <----------DOF2     ---------                  <---------ARR14(2)<-------TEIL      --------------->AGL15       <---------ANAC55(1)      --------->ATHB12      <---------O2--------->MYB46(3) ---------->DOF2       --------->MYB52(2) <     <---------AHL20(2)     <---------ANAC46   <---------TOE2(2)   ---------->DOF2<---------ANAC55(2) ----ZAT6     <------ZmHOX2a(1)   <---------GLK1(1)  ----------------->AGL3  <---------MYB46(3) <----   ttcatagataattggaggaagaaccttgtctcgtggagttcatccatcgtgggtttctacaaaaaggaagaaagctttttggttacttgtcaagcggacc  18852300       <---------HSFB2a(2)    --------->ARR11(3)    <---------ARR14(2)  <---------ZAT18   <---------CCA1(2)    <---------ZAT14 --------->YAB1         --------->ZAT14  <---------ARR11(3)                               <-------GAMYB --->MYB46(1)         --------->ANAC46   --------->ARR11(3)                              <-----------RAV1(1) --->MYB83          --------->ZAT6      <---------CCA1(2)       ----------->GT1     <---------ANAC58 >ZAT18--------->HSFB2a(2)       --------->MYB59            --------->ARR11(3)      <---------ANAC58 ---------ATHB12  <-----------GT1<---------TOE2(3)   >>>>>>>>>>GT-3b         <---------ZAT6 -----MYB59     --------->AHL20(2)----------->GT1 ----------->GT1            ----------->HVH21 <-----   aaatcatatctagaaagattaaacactacacttgtaaggtatatatcttgggaagaaaaatagatgttgtgatatcgtagtgacaggcttgctgttgcat  18852400  Previous    Next  AGI:  At5g46430.1    Description:  60S ribosomal protein L32 (RPL32B). Identical to 60S ribosomal protein L32-2 (RPL32B) [Arabidopsis Thaliana] (GB:Q9FHG2); similar to 60S ribosomal protein L32 (RPL32A) [Arabidopsis thaliana] (TAIR:AT4G18100.1); similar to ly200 protein [Capsicum annuum] (GB:AAR83884.1); similar to ribosomal structural protein [Brassica juncea] (GB:ABM30195.1); contains InterPro domain Ribosomal protein L32e; (InterPro:IPR001515) Range:  from: 18850494    to: 18851791    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g46440.1    Description:  similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G46460.1) Range:  from: 18851870    to: 18852380    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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