Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              ------>NtERF2                                                                       <---------WOX13(1)                                                                      <---------ANAC58                                                                      <---------ANAC58                                               --------->ATHB12      --------->ATHB12        <---------YAB1             ------>ZmHOX2a(2)         --------->AHL20(1)  <------MYB83                    <-----------------AGL1     <---------AHL20(1)  <------MYB46(1)                --------->ARR14(2)          --------->ARR11(3) ------>ZAT2                     <---------ARR14(2)        <---------ARR11(3)           <---------At4g35610 ---->MYB46(3)               <---------At4g35610           --------->ARR11(3)           --------->At4g35610 ---->RAV1(1)              <---------WOX13(1) <------ZmHOX2a(2)     <---------YAB1    <------ZmHOX2a(1) -->MYB52(1)           --------->YAB1         <---------YAB1--------->CCA1(2)      <-----------RAV1(2)   agcttggtttacaatagttttcgaatcagattgctgatctgttttgggatcattgggatgagatatattgttgattgcagccatagcaggagctgtttta  18828600                                                                                                   <-                                                                                                  ---                          <---------GLK1(1)                                                      <---                          --------->GLK1(1)                                                      <---                  <---------DEAR3(2)                                                             <---                  <------MYB46(1)                                                                <---                  <------MYB83                          --------->ALFIN1                        <----                  <---------MYB46(3)                <---------MYB52(1)                      ---------                 <---------DEAR3(1)              <------NtERF2   <------ZmHOX2a(1)          <--------                <---------ORA47(1)  ----------->GT1--------->LBD16                         --------->ALFIN1              <---------MYB46(3)--------->ARR14(2)<---------ANAC46          <---------ARR14(2)-------             <---------AtMYB61  <---------ARR14(2)<---------ANAC55(2) <---------DEAR3(1)<---------TOE2(3)   gaccggtggaaattgatggtcggtttagatttccgaaccggtttattaggctccgtaagtgggagaaggaggtctgtggaatcggagaatgaggttgtgg  18828700       <---------bZIP60(2)       <---------ANAC58       <---------ANAC58       <---------ANAC46      ----------->STF1     <---------TGA2(2)    ----------->TGA1  <------ZmHOX2a(1)  ----------->bZIP910(2) -----NtERF2                                                    --------->MYB52(1) ------>LBD16                                                  --------->TOE1(2) ------DEAR3(1)                                               <---------MYB52(2) ------ANAC46                                            <---------HSFC1(1) ------ANAC58                                            --------->HSFC1(1) ------ANAC58                                            <---------HSFB2a(2) -----LBD16                                              --------->HSFB2a(2) >ALFIN1                                            <----------DOF2       --------->DEAR3(2) -MYB46(3)                                    <---------YAB1<<<<<<<ZML2  ------->TEIL -->ALFIN1                                  --------->CCA1(2) --------->MYB46(3)                  <<<   cggaggatgacgtagaagggttttgagagagagcatcgatgggaagagatgattcttttctagaacgaacgaatgaaccgaagattaatcggtttttaag  18828800                               --------->TGA2(2)                             --------->TGA2(1)                             --------->ANAC58                             <---------TGA1a                             --------->bZIP60(2)                             --------->ANAC58                             --------->TGA1a                             <--------P                             <---------O2                               <-------GAMYB                             <---------bZIP60(2)                       <------MYB83                             --------->O2                              <------MYB46(1)                             >>>>>>>>>>HY5                            <---------MYB46(3)                             <---------ANAC55(2)                      --------->MYB55(2)                             <---------bZIP60(1)                     <---------ANAC46                             <---------ANAC46                      <---------MYB46(3)                             --------->ANAC55(2)                   --------->MYB55(2)                             --------->bZIP60(1)                  <---------DEAR3(1)                             <---------TGA2(1)                    --------->ALFIN1                            <-----------STF1                    <---------MYB46(3)                            ----------->STF1     --------->TOE2(3)<---------AtMYB61                 <------NtERF2<-----------TGA1   --------->YAB1 --------->MYB55(2)                  <                 --------->At4g35610            <---------ZAT6 --------->ALFIN1             ---------                 <---------At4g35610     <---------LBD16       <---------DEAR3(1)           <--------         --------->ATHB12  <---------TGA2(2)<---------MYB52(1) <---------AtMYB61      <-------TEIL  < <<<<<<<<<<<<<<LFY        ----------->TGA1 --------->LBD16  <---------DEAR3(1)    <---------TOE1(2) <   ttccaatggagttattggcatcggaattgtgacgtcattgttctccggtaatgttaacagagacggtggtggtgggttgattcttgggttcatcaagtat  18828900                                    <---------MYB52(1)          <---------WRKY12          --------->DOF5.7(2)          <---------WRKY38(1)     <---------MYB46(3)      <------NtERF2        <-----------HVH21    <---------DOF5.7(2)         ------>NtERF2 ---------ANAC58             <---------At5g28300        --------->LBD16       <---------ARR11(3) >ANAC55(2) <---------YAB1 <---------MYB52(1)           <---------LBD16       <---------GLK1(2) -ANAC55(2)--------------------->WRI1      <---------ZAT2--------->LBD16      --------->ARR11(3) ---------ANAC58           --------->DOF5.7(2)         <---------LBD16       <---------RVE1(1) ---------ANAC46          <-------GAMYB    ----------->RAV1(2)     ---------->DOF2                 *TSS   tggcgtaatgggtcatcgttgttatcgccgttaccgtcgttagccatctgggttttcgccgggaaactggaaagttgagagatttttgaaactagggtcg  18829000                                                                <---------------AGL15                   --------->DAG2                               <----------DOF2                  ---------->DOF2                              <---------DAG2                 --------->CCA1(2)                             <---------------AGL15           <---------ANAC46                                   <-----------------AGL3      --------->YAB1<---------TOE2(3)                        ------->TEIL     --------->ARR11(3)     <---------ATHB51                                       <-----------GT1   <---------ARR11(3)  --------------->AGL15                                  <---------------AtSPL8  <---------------AGL15                                  --------------->AtSPL8    <---------MYB52(1)  =============================================================================MADS_MADS ----------------->AGL1                                  <---------------AtSPL3 ------>ZmHOX2a(2) <-----------------AGL1       <---------DAG2       --------->AtMYB61        <---------YAB1       <--- <-----------------AGL2       <----------DOF2  <---------ETT(1)--------------->AGL15    ---------->ID1   ttttccgataatggtggagataaaggaagaagctttttctgtctgaagcccgaccaaaggttgtaccttttttgggttatgatctgttttgtttttttta  18829100                                                    <---------TOE2(3)                        <-------                                               <---------AHL20(2)      <----------ID1    <-----------                 <---------YAB1 --------->YAB1--------->AHL20(2)     ---------->DOF2 <---------------        <---------ZAT6    --------->GLK1(2)--------->YAB1 <---------TOE2(3)      <----------DOF2 ------YAB1    <---------AHL20(2)         <---------YAB1 ---------->DOF2     <---------GLK1(2)   tgcttattcagtgttatttattcttgagaatcgttcatagtactatgattttataagattaaagttttcgaaaaagacaaattctttttttttttttttt  18829200                                                                                   <---------ARR14(2)                                                                                   --------->ARR14(2)                                                                                   --------->GLK1(2)                                           --------->YAB1                          ------->TEIL                                         <---------WOX13(1)                 <---------WOX13(1)                                       --------->ATHB12               --------->ARR14(2)<---------TOE1(2)             <-----------GT1 <---------AHL20(2)                       <---------ARR14(2)<---------TOE2(2)          --------->MYB52(2) <---------AHL20(1)                      <---------CCA1(2) ------>ZmHOX2a(1)          <---------MYB46(3) --------->AHL20(2)               <---------------AtSPL8  --------->TOE2(2) -----------------ANAC81     --------->AHL20(1)              <---------ANAC58  <---------TOE2(3) -------------ANAC81 ------->TEIL  <---------TOE2(3)         <---------ANAC58 --------->MYB52(1) ---- ---------ANAC81    <---------CCA1(2) <---------YAB1         <---------ANAC46 <-----------GT1   -----   ttgtttgtttgtttgttacaatgtatcttattttattaagatgattgataacatgaatagtttacttgtacatatctgattaacgaatcctatgttgatg  18829300                                                                              --------->ATHB12                                                                             --------->ICU4   --------->AHL20(2)                                                        <---------YAB1   <---------AHL20(2)                  <----------DOF2         ------>ZmHOX2a(1)           <--------- ----->At5g28300        <-------TEIL   --------->TOE2(3)      --------->TOE2(3)  ----------->GT1   -- ------>GT1  --------->PCF2          ------->TEIL           ---------->ID1 --------->CCA1(2)       --   gtaaattaaaaattggacccataacattcgtatcaaacgaactttaatcaaatgttttttttgtccttaatctcaagagatgattgtaacatttaactca  18829400                                     <---------AHL20(1)                               ----------->GT1                               --------->O2<---------YAB1                               --------->ANAC58                               --------->ANAC55(2)                               <---------ANAC55(2)                   <---------YAB1                             <-----------GT1            <---------AtLEC2  ----------->GT1          <-----------HVH21  <---------TOE2(3)   --------->ICU4  --------->MYB52(2)--------->AHL20(2)    --------->TOE2(3)       <---------YAB1               <----- --GT1            ----------->GT1    --------->ARR11(3)<---------ZAT14  <---------YAB1   <-----------HVH21 ------->YAB1  <------ZmHOX2a(1)     --------->AHL20(1)--------->ZAT14<-----------GT1   ----------->GT1 ------->TOE2(3)---------->DOF2--------->ANAC58   <---------GLK1(1)<---------ICU4   ---------->DOF2 -   atgttagttaatacacaggaaagtaaatttgtcacgttatatattgttaatgaattctgcagggtgagattattactattggaaatgaaagggtcatata  18829500  Previous    Next  AGI:  At5g46370.1    Description:  KCO2 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 2); calcium ion binding / outward rectifier potassium channel. Identical to Probable calcium-activated outward-rectifying potassium channel 2 (KCO2) [Arabidopsis Thaliana] (GB:Q9FL25;GB:Q9SCY7); similar to KCO6 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 6), outward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT4G18160.1); similar to TPK1 [Nicotiana tabacum] (GB:ABX60975.1); contains InterPro domain Potassium channel, two pore-domain; (InterPro:IPR003280); contains InterPro domain Ion transport 2 (InterPro:IPR013099) Range:  from: 18826803    to: 18828999    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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