Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->MYB52(1)                     ----------->RAV1(1)         --------->ANAC58                    <----------ID1               --------->ANAC58                  --------->ANAC58             ---------->DOF2              --------->ANAC58                  --------->ANAC58        ----------->GT1                   --------->ANAC58                ---------->DOF2          --------->DAG2                     <---------ANAC55(2)             --------->YAB1 ----------->GT1<----------ID1 ----------->RAV1(1)            <---------STY1(2)      --------->ZAT18--------->RAP2.6(2) <---------------AtSPL8<------ZmHOX2a(1)   ---------->ID1   ---------->DOF2--------->ANAC46      ---------->DOF2------->GAMYB        --------->ANAC55(2)    <- ------GT1   --------->AHL20(2)  --------->REM1(1)  ----------->RAV1(1)  --------->ARR14(2)   <------   caacaaaatgcacaattaaaaagccacaaaatgttacaacaaaaaagtacaaagcaacagcaacaggatgagtctgatacgcattgtcgctatctagagt  18825100                                          --------->ANAC58                                        ---------->DOF2                                     --------->ANAC58                                     --------->ANAC46                                --------->ANAC46       <---------ANAC58                           <--                              --------->ANAC46    <---------ANAC58                               ----                              --------->ANAC58    <---------ANAC58                             <-----                              --------->ANAC58 ------->PIF5                   <---------WOX13(1) <---          --------->ANAC58   <-------TEIL --------->ANAC58        --------->GLK1(1)        ------>ZmHOX2a(1) --------At4g35610 ---------->DOF2   --------->ANAC58  <---------ANAC58     --------->ATHB12 <------- ---ZAT6  --------->ANAC58  --------->CCA1(2)  <-------PIF5       <---------GLK1(1)        --------->LBD16   cagccaatagataagcacacctaaagagagatacacaacaagcaaagcaagtgcttgtcttgcaatggatttcgaaactgattgctctgtttcctggtca  18825200                                                                    ----------->GT1                                                                    <---------ANAC46                                                                   <------NtERF2                                                            <---------MYB52(1)     <-----------RAV1(1)                        <---------MYB52(1)                --------->ANAC58        <---------DEAR3(1)                       <-------GAMYB                      --------->ANAC58      <---------AGP1     <-            --------->At4g35610 --------->HSFB2a(2)      <-------TEIL <---------MYB52(1)          --- ----ZmHOX2a(1)      <------NtERF2                       --------->SPL7        <------MYB83------>ZmHOX2a(2) ----->At4g35610   <---------bZIP60(1)                 <---------SPL7--------->LBD16     --------->ARR14(2) ------RAV1(2)     <---------ANAC46 ---------->DOF2   <---------MYB46(3)       <------MYB46(1)  <---- ------At4g35610   --------->bZIP60(1)            <---------DEAR3(1)<---------ANAC55(2)  <---------ARR14(2) ----HVH21  --------->ZAT2      <---------HSFB2a(2)  --------->ALFIN1--------->At5g28300<---------PCF2   ggagccatatcagtagctgtgtcgtcgttgtgttctggtaaagaaaacagagacggtggtacgttaggctccgtaaattgtaggtctgtgggatcggagg  18825300                                                                                 <---------LBD16                                                                          <---------MYB52(1)                                                                         <-------GAMYB                                                                     <---------ANAC46                                                                     <---------O2<-----------------AGL1                                                                     --------->O2<-----------------AG                                                                     --------->TGA1a                                                                     <---------bZIP60(2)                                                                     --------->bZIP60(1)                                                                     <---------bZIP60(1)                                                                     ============MYC_MYB                                                                     <---------TGA2(1)                                                                     <---------TGA1a                                                                     --------->TGA2(1)                                                                    ----------->STF1     --------->YAB1 --------WRKY18(1)                                                 <---------TGA2(2)<---------MYB52(1) -------->HVH21--------->DEAR3(1)                --------->ATHB12 ----------->HVH21--------->LBD16 --ZmHOX2a(1)--------->At4g35610    <---------GLK1(1)             ----------->TGA1--------------->AGL15   atgaccgaggtaatgagccgaagagtaatcggtttttgaattccgatggagtcattggcatagaaatcgtgacgtcgttgttctccggtaatggtaacag  18825400                                                    <------MYB46(1)                                                   *TSS                                               <---------TOE1(2)                                    <                                               <---------TOE2(3)                                    <                                            ------>ZmHOX2a(2)                                    <---                                           <------ZmHOX2a(2)                                     <---                                           =============HOX2a_HOX2a                            ------                                          <---------ARR11(3)                                   ------                                          --------->ARR11(3)                                  -------                ==================================HOX2a_HOX2a     --------->YAB1              <------                ------>ZmHOX2a(1)       --------->ANAC58         <---------AHL20(2)         <--------                ===================================HOX2a_HOX2a --------->YAB1          <------------CBF               <---------ANAC58    ----------->HVH21<------MYB83 <---------YAB1      <---------AHL20(2)               <---------ANAC58   <---------WOX13(1)----------->GT1  --------->YAB1  --------->AHL20(1)            <---------PCF2      --------->ATHB12 <------ZmHOX2a(1)<---------ICU4     --------->AHL20(2) <---------AtMYB61  <---------MYB46(3)  --------->ANAC58     <-----------TBP         <---------AHL20(1)   gtattggtgtaatgggtccttgttgttgataaatcgattgacacgatcttaggatggttttttttttataattagaatgtgtcatattttattgagatga  18825500                              ----------->GT1                           --------->ATHB12  <------------CBF        <---------YAB1 ---------YAB1            --------->ICU4                                       --------->MYB46(3) ---------TOE2(3)       <---------At4g35610              <---------ANAC46      <---------MYB52(2) ------YAB1        <------------CBF                      <---------ANAC58     <---------TOE2(3) ------WOX13(1)  <---------AHL20(2)           <---------ANAC46 --------->STY1(2)  ------->TEIL --->ATHB12      <---------AHL20(1)         <---------MYB46(3) <---------STY1(2)------->GAMYB ----->GT1       --------->ARR11(3)     <---------AtMYB61<---------ANAC58    --------->MYB52(1) -->ICU4         --------->AHL20(1)  <---------YAB1   --------->WRKY12     <---------WOX13(1) ---YAB1      --------->AHL20(2) <-----------GT1  <---------YAB1        <---------AHL20(2) -At4g35610<------ZmHOX2a(1)<------------CBF----------->GT1<---------REM1(1) <-----------GT1   ttaatattgtcgaggataaaatattgagatgattgtaacatgatggtggtttatagttgacttgtagctagtatttgattaacgaaccctatgtttttgt  18825600                                                                                                -----                                                                                               <-----                             <---------ARR14(2)                                            --------->At4g35610                      <---------MYB46(3)                                               <-----------HVH21                     ----------->ARR10      --------->GLK1(1)                       <---------ANAC55(2)               <-----------RAV1(2) <---------At5g28300                              <---------ANAC58          <---------REM1(1)  <---------GLK1(2)              <---------YAB1          --------->ANAC55(2)       <-----------RAV1(1)   --------->ARR14(2)          <---------YAB1             <---------ANAC58       ====================RAV    <-----------GT1        --------->ICU4           <-----------GT1   ttatattttgtgttgtaccaggggtgattcggatttttaccatcagagttctaatgggcatgattctagagttttctattcaaattacgagtcatatgca  18825700                                                                            --------->AHL20(1)                                                                            <---------AHL20(2)                                                                            <---------AHL20(1)                                                                           <---------AHL20(2)                                                                           --------->YAB1                                                                       --------->AHL20(1)                                                                       <---------AHL20(1)                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)             ----------->HVH21                 --------->At4g35610  --------->YAB1            ------>ZmHOX2a(2)                  <---------At4g35610 <---------YAB1           <---------At4g35610                ------->TEIL        --------->AHL20(2)      <---------MYB52(1)     --------->ICU4  ---------->DOF2      ------->TEIL      --------->ANAC55(2)   <---------YAB1 -->TEIL  <---------AGP1    >>>>>>>>>TBF1<---------AtLEC2   <---------ANAC55(2) ----------->GT1 ----AtLEC2--------->At4g35610         <---------YAB1  <------ZmHOX2a(1)   --------->AHL20(2)       -   tgtagtcatgttgatctgacaaaaaaagaagaagaagcattatgcatgtagctgataggaatacctgatataataaattatattgtaattctgttttttt  18825800                    <---------YAB1                    ----------->GT1                  -------->HAHB4                  --------->YAB1               --------->YAB1              --------->ICU4                                               --------->ANAC58            --------->YAB1                                           ---------->DOF2      <---------GLK1(2)      <-------TEIL<---------ICU4                                --------->WRKY38(1)     --------->ICU4  --------->DAG2 --------->ICU4               <---------YAB1    --------->WRKY12      --------->YAB1< ---------->DOF2 <---------YAB1   <---------HSFB2a(2)     --------->TOE1(2)--------->ANAC58   <------ --------->DOF2<---------ICU4     --------->HSFB2a(2)  <---------GLK1(2) ---------->DOF2<---------YAB1   cgaaaaggcgcatagcataatgatgaaaaacgttttctagataaaactacaattgtagattctacgatgaccaaagaaagcaactcagtcatgattctca  18825900                            ------>MYB83                            ------>MYB46(1)                          <---------MYB59                         --------->ANAC46                      --------->ARR14(2)                      --------->ZAT14                      <---------ZAT14                  --------->YAB1              --------->ANAC46             <---------REM1(1)               --------->YAB1                 --------->ANAC58           <-------GAMYB              -               <---------ICU4        <-----------GT1                    <---------MYB46(3)<---------MYB52(2)   --------->AtMYB61  <---------ARR14(2)      --------->ANAC58         <---------AtMYB61--------->ZAT6 ------ZmHOX2a(1) <---------ICU4   <---------AHL20(2)        <---------AHL20(2)  --------->GLK1(2) <- ---YAB1      <---------ATHB12    --------->AHL20(2)        --------->AHL20(2)  <---------GLK1(2)  <-   taggaccaaaacttcaataatcagtataccgaacaaattaatccattcacgaattagaccgttttaatttgttttggttgtagattctttccactaacaa  18826000  Previous    Next  AGI:  At5g46360.1    Description:  KCO3 (Ca2+ activated outward rectifying K+ channel 3); calcium ion binding / outward rectifier potassium channel. Identical to Probable calcium-activated outward-rectifying potassium channel 3 (KCO3) [Arabidopsis Thaliana] (GB:Q9XFR0); similar to KCO2 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 2), calcium ion binding / outward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT5G46370.1); similar to TPK1 [Nicotiana tabacum] (GB:ABX60975.1); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 18824048    to: 18825451    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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