Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               --------->MYB52(1)                           --------->MYB46(3)                        ----------->HVH21                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                      --------->At4g35610                      <---------At4g35610                     --------->GLK1(2)                     --------->ARR14(2)                     <---------ARR14(2)                     <-----------ARR10                     <---------AGP1                     ------->TEIL                                   --------->WOX13(1)                  --------->ANAC46                    --------->HSFC1(2)                  --------->ANAC58                    --------->HSFB2a(1)                 <---------LBD16                      <---------HSFB2a(1)                 --------->LBD16                      <---------HSFC1(2)  <-----------HVH21 <---------CCA1(2)       <---------ZAT18       <------ZmHOX2a(2) --------->TOE1(3)--------->ANAC58--------->ARR14(2) --------->ANAC58  --------->YAB1     <---------At4g35610 ---------GT1   --------->MYB52(1)<---------ARR14(2) --------->ANAC58 <---------ATHB12    --------->At4g35610   taaccttcagagctaaacccacggatctgaccaccgaatcgagtagggaacttggaagcatcgaaacgatcaatcaaactgattccactctcaccagaca  18793600                                                                                         <---------ANAC46                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                 ====================                                                                                 ------>ZmHOX2a(2)                                          <---------O2                          <------ZmHOX2a(2)                                          --------->O2                          =====================                                ------>MYB83                                   --------->ARR14(2)             --------->ANAC58   ------>MYB46(1)                       <---------CCA1(2)<---------ANAC46             --------->ANAC58 <---------MYB46(2)             --------->YAB1    <---------ARR14(2) <--       --------------------->WRI1       --------->CCA1(2) --------->YAB1       <---------AGP1     ---     <---------HSFB2a(2)      <---------MYB59             <---------ICU4      <---------CCA1(2) <----     --------->HSFB2a(2)  --------->DOF5.7(2)          --------->ANAC46    <---------LBD16<----------DOF2   acaatttctcgtagtaagcatcaacatcgttaccaaacacagagacgagacccataccagtaatgacaactcgtttcttcggatctgtttcgcgtttagg  18793700                          <---------REM1(1)         <---------MYB46(3)  ----------->HVH21     --------->At4g35610                                         <---------TOE2(3) ==HOX2a_HOX2a       --------->LBD16                           --------->YAB1    <---------WOX13(1) ==HOX2a_HOX2a  <---------At4g35610                            ----------->GT1 --------->ATHB12 -------At4g35610   <---------ANAC46             ---------->DOF2              <---------YAB1 ------>At4g35610  <---------LBD16<---------HSFB2a(1)--------->ARR11(3)<---------At4g35610 --ZmHOX2a(1)<---------At4g35610  --------->HSFB2a(1)<---------ARR11(3)--------->At4g35610   agcggagacagtggatgctgatgcggagatgaaggaacgttgttgtcttcgcaaaggtctcgcattggtaattagctgatgtgattgacgatttgatggt  18793800                                                             --------->HSFB2a(2)                                                             <---------HSFB2a(2)                                                            ------>ZmHOX2a(2)                                                           <------ZmHOX2a(2)                                                          --------->ARR14(2)                                                          <---------ARR14(2)                              --------->CCA1(2)         <---------MYB46(3)                              --------->At4g35610 <---------ANAC58       <------MYB46(1)  --------->ANAC58          <---------ANAC58       <------MYB83     --------->ANAC58      <---------ANAC58     --------->ALFIN1  <---------LBD16        <---------ANAC58   <---------TGA1a  --------->ANAC58        --------->ARR11(3)   --------->O2     --------->ANAC58        <---------ARR11(3)--------->LBD16                   <----   <---------O2 <------ZmHOX2a(1)  <---------YAB1 <---------AtLEC2                          <------ZmHOX2a(1)   aagcgaagtgggtttggaggagaagcacggagagatgaagattgaagagcttgcatggtggatccagaaattgagagaggtattgagagagagaggaagg  18793900                                                                 <---------GLK1(1)                                                                 --------->GLK1(1)                                <---------ANAC46              *TSS                     ----------->TBP            <---------ANAC46  <---------ANAC46           <-------TEIL                --------->YAB1            ----------->GT1   <---------bZIP60(2)     <---------YAB1   <------ZmHOX2a(1)      <---------TOE2(1)<---------ANAC58         <---------ARR11(3)  <-----------RAV1(2)<---------YAB1      <---------TOE1(1)<---------ANAC46         --------->ARR11(3)  <---------LBD16 <---------YAB1<-- -----------------WRI1 <---------ANAC58     ---------->DOF2<-----------HVH21        <---------AHL20(2)   cgataagtacgatgttgtgaaaatggtgtgtgatgtgtgttttgcgaaaagagcttatgttcgtcagatttcaggagcaagactatattataaaaaaaac  18794000            <------ZmHOX2a(1)         <---------LBD16         <---------HSFB2a(2)         --------->HSFB2a(2)  --------->ICU4    -------->ATHB1        --------->At5g28300        <-----------GT1                         <------- -------------------WRI1 ----------->GT1      <---------MYB52(1)      >>>>>>>ZML2   <---------TOE2(3)   agcgaattattcgaggaaatttttggactgtaatttttctctaagtcccttaattttacaagtgttttagttctagccttgtagtttatgttattctact  18794100                           <----------DOF2                    --------->ANAC58                    --------->ANAC58               <---------------AtSPL8                                                           <----               <---------------AtSPL3                                             ------>ZmHOX2a(2)          --------->AHL20(2)                                        ------->TEIL<---------AGP1 <-----        <---------------AGL15                                    <---------YAB1 ------->TEIL   ------       <-----------------AGL3                                  <-----------GT1  --------->ARR11(3) <------MYB83  --------->MYB59                              <---------ICU4      <---------ARR11(3) <------MYB46(1)   <-------TEIL               --------->ANAC55(2)--------->ANAC55(2)         -------- ----GT1--------------->AGL15                 <---------ANAC55(2)<---------ANAC55(2)        <--------   atttggtctacttaaaataggtacggatgctttgagccattctccaattcgtaactcaacaaaaattacgaatcgaagaatggatctattcgctatcata  18794200                                                                                                  <xx                                                                                                 <xxx                                                                                                xxxxx                                                                                                xxxxx                                                                                               <-----                                                                                               ------                                                                                               xxxxxx                                                                                               xxxxxx                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             <-----                                        --------------------->WRI1                            xxxxxxx                                       --------->ATHB12                             <----------DOF2                                      <---------YAB1                             <---------ARR11(3) -----ICU4                            <---------AHL20(2)                         --------->ARR11(3) < ----YAB1                        <---------YAB1                                  <---------AHL20(1)<x --->ICU4                      --------->AHL20(2)                       <---------ZAT6      ------>ZmHOX2a(2) ->YAB1            <---------ANAC58<---------AHL20(2)              --------->DOF5.7(2)      xxxxxxxxx -YAB1             <---------ANAC58--------->AHL20(2)         <---------GLK1(2) xxxxxxxxxxxxxxxxxxxxx   attcgattgtcttcagttttagcttgaactcgattatttttttattggatttttcgaaaacatagaatcgtttactgttacaatatcttttagatcggat  18794300            <------MYB83           xxxxxxxxxxxxxxxx>smallRNA(i)           <---------DEAR3(1)          <--------P         <---------ANAC58         <---------ANAC58         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        --------->ATHB12        <---------MYB46(3)        --------->MYB55(2)       <---------AtMYB61      xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------ANAC55(2)  <---------ANAC55(1)  <---------ANAC58  <---------ANAC58        <----------DOF2  <---------ANAC46       <---------DAG2  --------->ANAC55(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------TOE2(3)    <-----------GT1 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxx>smallRNA(i2) ----GLK1(2)<------MYB46(1) --->ARR14(2) <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxx>smallRNA(i2) ----ARR14(2) xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxx>smallRNA(fl3) -----------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                    <---------TOE2(3) xxxxxxxxxxxxxx>smallRNA(se3)                       <---------GLK1(1)<-----------GT1 xx>smallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        --------->ANAC46    <---------ALFIN1   <   ttttacgtattggttggctcaaattcacctttggtttttagatttcaaaaatagatttcttatactcaaattaacatttacacacacattttggtttcag  18794400                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                          ------>ZmHOX2a(2)                                                                                         <xxxxxxxxxxx                                                                                         <---------bZIP60(2)                                                                                         <---------At4g35610                                                                                         --------->At4g35610                                                                                        --------->ARR11(3)                                                                                       <---------ZAT14                   <---------GLK1(1)                              <---------YAB1   <xxxxxxxxxxxxxxxxx                   --------->GLK1(1)                    <---------YAB1            <xxxxxxxxxxxxxxxxxx           <---------At4g35610                          <---------AHL20(2)        <xxxxxxxxxxxxxxxxxx ---------YAB1<---------LBD16                <---------YAB1       <---------AHL20(2)<xxxxxxxxxxxxxxxx   ttttcattcgtttagcttcggatttctgtaaattggtttttttagttattaatagaatattattcagttttattgttttcatttttgagtgatctggctt  18794500  Previous    Next  AGI:  At5g46290.1    Description:  KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); fatty-acid synthase. Identical to 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (KAS1) [Arabidopsis Thaliana] (GB:P52410;GB:Q9FL32); similar to FAB1 (FATTY ACID BIOSYNTHESIS 1), fatty-acid synthase [Arabidopsis thaliana] (TAIR:AT1G74960.1); similar to FAB1 (FATTY ACID BIOSYNTHESIS 1), fatty-acid synthase [Arabidopsis thaliana] (TAIR:AT1G74960.2); similar to beta-ketoacyl-ACP synthase I [Perilla frutescens] (GB:AAC04691.1); similar to plastid 3-ketoacyl-ACP synthase I [Cuphea pulcherrima] (GB:ABA07910.1); similar to beta-ketoacyl-ACP synthase (GB:AAA33873.1); contains In Range:  from: 18791313    to: 18793962    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version