Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -          <----------DOF2                                                                           -     <---------ATHB12                                                                               <    --------->ANAC58                                      --------->LBD16                     <------    --------->ANAC58         ----------->HVH21  ------>ZmHOX2a(1)                             -------   --------->WOX13(1)     --------->TOE1(2)    --------->TOE1(3)                              <------ -------->ANAC58          --------->TOE2(2) --------->ARR14(2)                                ------- -------->ANAC58<-----------HVH21           <---------ARR14(2)      --------->TOE2(3)         ------- ------->DOF2 <---------TOE2(3)     --------->YAB1    --------->ARR14(2)    ------->TEIL--------->TOE2(3) ----->AtMYB61<---------TOE1(3) <---------YAB1 --------->TOE2(3) <-----------GT1        --------->TOE1(3)   caaagcaatcaactttaaggtcacaaaacatatgacaattgtagtgaatccttaaaaatccccaaattaacctcactgaatctaacaaaaccctaaaatc  18790500        --------->YAB1       <-------TEIL  <---------MYB52(1)                                                                            <---- --------->LBD16                                                                               ------ --------->At5g28300                                                                           <----- <---------RAP2.6(3)                                                                           <----- ---------->GT1                                                                             --------- -------->RAP2.6(2)                                                                     <---------ZAT14 ---------ANAC46                               <----------ID1                           --------->ZAT14 ---ARR14(2)                                 <------ZmHOX2a(1)                         ----------->HVH21 -->ARR11(3)                              <---------LBD16                       --------->HSFC1(2) ---ARR11(3)          ---------->DOF2     <---------HSFB2a(2)               --------->ANAC46<-------- -->GLK1(2)   --------->TOE1(3)           --------->HSFB2a(2)        ------->TEIL    ----------->RAV1(2) -->ARR14(2)  --------->TOE2(3)  --------->AHL20(2)          --------->At4g35610<---------HSFC1(2)   tgccgtaaattcataaccttatactaaagaaccgattaaaaattcgaggaagacaaattgagaagatgacgaacctagaggcaacttccctgaagtggtg  18790600                  --------->YAB1                  <---------ICU4                  -------->HAHB4                                                         --------->AHL20(2)   <-----------HVH21     <---------DEAR3(1)                                        --------->LBD16 -----MYB46(3)   <---------ATHB51                                                 --------->ANAC55(2) --->ALFIN1      --------->ICU4            ------->TEIL                           ----------->GT1 ----ANAC46<---------RVE1(1)            <---------REM1(1)           <-------TEIL  <---------ANAC55(2) ----AtMYB61   --------->YAB1     <----------DOF2       --------->GLK1(1)      --------->ARR14(2) >ALFIN1  <---------ARR11(3)----------->HVH21           <---------GLK1(1)  --------->ANAC46 -AtMYB61 --------->ARR11(3)----------->TGA1  ---------->DOF2------>ZmHOX2a(1) --------->GLK1(2)  <--   gtgaatgtcagagatattaataatgagacggtgacgcttttgatgtaccaaagccttgatttcctccatatacatctacacaatccgtaaaaaaaatcca  18790700                                                                                              <------                                                                                              <------                                                                                        <---------ARR11(3)                                                                                        --------->ARR11(3)                                             ---------->DOF2                         --------->AHL20(2)                                      --------->At4g35610                    --------->ARR14(2)                           --------->HSFB2a(2)                               <---------ARR14(2)                           <---------HSFB2a(2)--------->DAG2                <------ZmHOX2a(1) <------ -------DAG2         <---------GLK1(2)<---------At4g35610         --------->ZAT6 ----------->GT1   atttttcaaattagataagaacagaagctcgagaaatgtctggtgagaaaagtgatagaaatcgacttacactatcgaggaactggataaaatctcgctt  18790800         --------->O2         <---------O2         --------->TGA1a     --------->HSFB2a(1)     --------->HSFC1(2)     <---------HSFC1(2)     <---------HSFB2a(1)   --------->ATERF1(1)                   --------->ARR14(2) <---------ANAC58                        --------->GLK1(2)          <<<<<<<<<TBF1 <---------ANAC58               --------->TOE2(3)             <----------DOF2                       < ---ANAC58                <-------TEIL   --------->ARR11(3)   <---------DAG2                        - ---ANAC58      ------>ZmHOX2a(1)        <---------ARR11(3)--------->ARR11(3)                       < ---ANAC46      ----------->RAV1(2)      <---------ARR14(2)<---------ARR11(3)        *TSS   ---------   gtggcgaagcctcgtctcctctggcacatccatttcttaacaaaatctgggttcttcgtaagaacttttcttcttctacttaaaaaaaaaaaactgatta  18790900                                                    <---------ANAC58                                       ==============HOX2a_HOX2a                        <------NtERF2                                       ------>ZmHOX2a(2)                              <---------ANAC46                                      --------->HSFB2a(1)                             <---------ANAC58                                      <------ZmHOX2a(2)                               >>>>>>>>>>E2Fa                                     <-----------ARR10                                <---------ANAC58                                     <---------ARR14(2)                              <<<<<<<<<E2Fc                                     <---------ARR11(1)                              <---------LBD16                                     --------->ARR14(2)     <---------ANAC58         <<<<<<<<<E2Fd                                     --------->ARR14(3)     <---------ANAC58   <----------DOF2                                     <---------ARR14(3)     <---------ANAC55(2)<---------DAG2                                     <---------ARR11(3)     <---------ANAC46 --------------->AGL15                                     --------->ARR11(3)  --------->GLK1(1)   <---------------AGL15                                    <---------ARR14(1)<------NtERF2          ========================                                    <------NtERF2  <---------LBD16          <-----------------AGL1                                    <---------CCA1(2)--------->LBD16        <-----------------AGL3                                   ----------->ARR10<---------ANAC46        =========================   <-----------GT1                <---------DEAR3(1)<---------ANAC58   --------------->AtSPL8     --- ---------GLK1(2)            --------->DAG2    <---------ICU4         ----------->RAV1(2)    -------- -------->ARR11(3) --------->HSFB2a(2)===============HOX2a_HOX2a     <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< ---------ARR11(3) <---------HSFB2a(2)--------->GLK1(1)  <---------GLK1(1) ------->TEIL--------->LBD16 >ATHB12<---------GLK1(1)   ---------->DOF2   ------>ZmHOX2a(1)      <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<   gagattttcgatttccgatttcgagaggcataaagggcggatcttctccttatggcgggatttcgtgagataacctgtaccctttttggcgggaagggtc  18791000                                                            ----------->GT1                                                           --------------->AtSPL3                                                           --------->ATERF1(2)                                                           <---------MYB46(3)                                                   <---------ARR14(2)                                                  ------>MYB46(1)                                                --------------->AGL15                                                <---------MYB59                                               <-----------------AGL1                              <-                                               ----------------->AGL2                             ---                                               ----------------->AG                              <---                                               ----------------->AGL1                            <---                                    <---------DAG2------>MYB83                             --------->ATHB12                         <---------ANAC58      <-----------------AGL2                    <----------DOF2                         <---------ANAC46    <-----------GT1<---------DEAR3(2)      --------->ANAC46       <---------RAP2.6(3)     <---------ANAC58----------------->AGL3              <---------REM1(2) ================================================================MADS_MADS        <<<<<<<<<<<<<<<<<<< ================================================================MADS_MADS        <<<<<<<<<<<<<<<<<<< ------>ICU4             <---------ANAC58  <---------WOX13(1)                 <---------ANAC46  <<<<< --->GT1<---------ARR14(2)     <---------ANAC58<-----------------AGL3         <---------ANAC58  <<<<< <<<<<<<<<<E2Fd       <----------DOF2   <---------YAB1     <---------ATERF1(2)<---------ANAC55(1)<--- <<<<<<<<<<E2Fc      <----------DOF2<----------DOF2--------->ARR14(2)         <---------ANAC58  -----   attttgggccgatattagttgggcctttcgtctacgtgctttttgattaaccaaatttgggccggtacaattttggacttacgtctacgcgcttgtttgg  18791100      --------->GLK1(1)      <---------GLK1(1) -----NtERF2 --->NtERF2 ------ANAC46      --------->At5g28300 ------ANAC58      <------NtERF2 <<<<<<<<<<<<<<<<<<<<<E2Fc                                              ----------->GT1 <<<<<<<<<<<<<<<<<<<<<E2Fd         --------->GLK1(2)                 --------->ATHB12 <<<<E2Fd         ----------->GT1 <---------ARR14(2)           <---------ATHB12 <<<<E2Fc  ------>ZmHOX2a(1)      --------->ARR14(2)         ------>MYB83                       <---- ------ANAC58---------->DOF2      <---------GLK1(2)        <---------MYB59               <----------DOF2 ----->ID1--------->TOE2(3)  --------->ANAC46 ---------->DOF2------>MYB46(1)          <-----------GT1   cgcgtttgatttcctcaaggcggtataatacacccagattctaaaccaaaaaccagacataccaaatcaattcattgtaaattcggtttaacttttgcta  18791200             ---------->DOF2             <---------ZAT14             --------->ZAT14      --------->ANAC58      --------->ANAC58                                                             ----------->RAV1(1)      --------->ANAC46     ------->TEIL                                         --------->YAB1    ---------->DOF2     ----------->GT1          --------->TOE2(2)            ------->TEIL -----At4g35610  ----------->GT1     >>>>>>>>>MYB2                    <---------LBD16   ctgccttcaagccagtaaaccgaaaaatgtatatatgaaaaccaaaataaacctgtgtgatttgagaacattttcggatgtatcacaacatatgtataac  18791300                                                                                           --------->KAN4(2)                                                --------->ANAC58               <---------------AGL15                                           <----------ID1                  --------->ARR14(2)                                           --------->ANAC46                --------->GLK1(2)                                           --------->ANAC58                <---------ARR14(2)          ----------->GT1                  --------->ANAC58      ---------->DOF2          <---------KAN4(1)   --------->AHL20(2)            ----------->GT1--------->ANAC58--------->AHL20(2)        --------->KAN4(1)   tgaaaaaaaattcagtataaatctaatttcttcgaatgtaaaaacacgacaagaattgttgagaaataaaagatgagaatcccctaattggattattctg  18791400  Previous    Next  AGI:  At5g46280.1    Description:  DNA replication licensing factor, putative. Identical to DNA replication licensing factor MCM3 homolog (MCM3) [Arabidopsis Thaliana] (GB:Q9FL33;GB:O65400); similar to PRL (PROLIFERA), ATP binding / DNA binding / DNA-dependent ATPase [Arabidopsis thaliana] (TAIR:AT4G02060.1); similar to replication origin activator 2 [Zea mays] (GB:NP_001105718.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66935.1); similar to mini-chromosome maintenance protein MCM3 [Pisum sativum] (GB:AAN73053.2); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain MCM; (InterPro:IPR001208); contains InterPro domain MC Range:  from: 18786924    to: 18790885    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g46290.1    Description:  KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); fatty-acid synthase. Identical to 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplast precursor (KAS1) [Arabidopsis Thaliana] (GB:P52410;GB:Q9FL32); similar to FAB1 (FATTY ACID BIOSYNTHESIS 1), fatty-acid synthase [Arabidopsis thaliana] (TAIR:AT1G74960.1); similar to FAB1 (FATTY ACID BIOSYNTHESIS 1), fatty-acid synthase [Arabidopsis thaliana] (TAIR:AT1G74960.2); similar to beta-ketoacyl-ACP synthase I [Perilla frutescens] (GB:AAC04691.1); similar to plastid 3-ketoacyl-ACP synthase I [Cuphea pulcherrima] (GB:ABA07910.1); similar to beta-ketoacyl-ACP synthase (GB:AAA33873.1); contains In Range:  from: 18791313    to: 18793962    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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