Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------LBD16                                                                        --------->ARR14(2)                                 --------->MYB46(3)                     <---------ARR14(2)             <------------MYB.PH3(1)     --------->ANAC58             ----------->ARR10            --------->RAP2.6(3) ------>MYB46(1)                  <---------At4g35610           <-----------GT1      ------>MYB83                     <---------LBD16                  ---           --------->MYB52(1)  ----------->RAV1(1)               --------->At4g35610          -------      <---------ANAC58        --------->AtMYB61                 --------->MYB52(1)        <---------WOX13(1)      <---------ANAC58       <---------MYB52(2)              ------->TEIL--------->MYB52(1) <--------  ---------->DOF2            --------->MYB46(3)---------->DOF2--------->MYB46(3)     --------->CCA1(2) ---------MYB59             ------>NtERF2--------->ANAC58 <---------MYB52(2)--------->LBD16 ---------   gacctaaagcttgtaacggcttaacaatgccaccaacaacaagacgaaatatagccgagaacgaaccagcggaagaaccggagcgagatttgatagatga  18733800                          --------->ANAC46                          <---------ANAC55(2)                          --------->ANAC58                                                  ---------                          --------->ANAC55(2)                                           --------->DEAR3(2)                          --------->ANAC58                                         <---------HSFB2a(2)         ------->TEIL  --------->ARR14(2)                                          --------->HSFB2a(2)         <---------ARR14(2)                                                        --------->HSFC1(1)         --------->ARR14(2)                        <---------DOF5.7(2)             <---------HSFC1(1)   ----------->TGA1    <---------ARR14(2)        --------->DOF5.7(2)          --------->HSFB2a(1) --------->YAB1    <------NtERF2             ------->GAMYB                    <---------HSFC1(2) ------->DOF2    <---------DEAR3(1)       --------->MYB52(1)                  --------->HSFC1(2) ---->HVH21     <------NtERF2  <---------------------WRI1                     <---------HSFB2a(1)  -- -At4g35610    <-----------HVH21     --------->ANAC58                       <---------GLK1(2)   <---- >At4g35610   <---------DEAR3(1)     --------->ANAC58         <------ZmHOX2a(1)   <---------LBD16 <--   caaagatgacgaatcgtcgtcggagattacgcaatcgacacgaacaacgacgttatcgacttgaggaacgagagaatggaatcttctggaaacgacgcag  18733900                        --------->ARR14(2)                        <---------ARR14(2)                     <------NtERF2                   --------->DEAR3(1)                   <---------DEAR3(1)                 <-----------HVH21                <---------TGA1a                <---------bZIP60(1)                --------->TGA1a                <---------O2                --------->ANAC46                                                                    <                --------->O2                                   <---------YAB1                     ---             ----------->HVH21                         <-----------RAV1(2)                        <--           <----------DOF2                     <------ZmHOX2a(1)   ------>ZmHOX2a(2)            <----           ===============bZIP_DOF             ===========================HOX2a_HOX2a           -----     --------->LBD16------>NtERF2           <------ZmHOX2a(1)<---------At4g35610               <----- >ANAC46<---------ARR11(3)                  ==============================HOX2a_HOX2a       <-------- ------->At4g35610--------->ATERF1(1)     --------->ALFIN1<------ZmHOX2a(1)                 <-------- -----At4g35610 --------->bZIP60(1)      =================================HOX2a_HOX2a     --------->MYB52(2) -------ARR11(3)<---------bZIP60(2)      <------ZmHOX2a(1)================HOX2a_HOX2a    <---------AtMYB61   catcttccgagagctttgacgtcgccgattttgttgaaaacgaggaggaggattgagtcaggaagatgatcgaaatggtcgatttctagggtttgtggtg  18734000                        ------>ZmHOX2a(2)                       --------->At4g35610                       <---------At4g35610             ----------->HVH21           --------->ANAC55(2)           <---------ANAC55(2)           <---------ANAC58        --------->ARR14(2)                                   --------->ARR11(3)        <---------GLK1(2)----------->HVH21                   <---------ARR11(3)        <---------ARR14(2)                           ------>ZmHOX2a(2)  --------->LBD16     <---------ARR11(3)           <---------AGP1<---------ANAC46 <---------ANAC46     <---------AGP1               --------->ARR11(3) --------->HSFB2a(2)  --------->ARR14(2)           <---------ARR11(3) <---------HSFB2a(2)<---------MYB46(3)    <---------RAP2.6(2)<---------ARR14(2) ---------LBD16    --------->ALFIN1      <---------At5g28300 <---------GLK1(2) ------>ARR14(2)  --------->At5g28300    --------->RAP2.6(3) <---------ARR14(3) -------ARR14(2)<---------DREB2C(2)     <---------ICU4<----------DOF2 -----MYB46(3)  <---------DEAR3(1)   <---------ICU4------->TEIL  <-----------RAV1(1)               <- ---->MYB55(2)  <---------ANAC46    --------->ICU4 <---------ARR14(2)                            <--- ----AtMYB61 ----------->TGA1    ----------->GT1   --------->ARR14(2)                         <------ ---RAV1(1)<---------ANAC58   --------->TOE1(2)   <---------CCA1(2)        <---------GLK1(2)<-------- -AtMYB61 <-------TEIL<---------ARR14(2)<-----------GT1      --------->ARR14(3)     <---------TOE1(2)   gttccggatggattcgtgacggtggatctgaacgagggataattacggccatggatctttgaagattttgtgggatagaatttttctaggtttttttcag  18734100                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                      <---------HSFC1(1)                        -----                                                      <---------HSFB2a(2)                ============                                               --------->ARR11(3)                        <------ZmHOX2a(1)    --------->YAB1    <----------DOF2          <---------ARR11(3)                   --------->ETT(1) --------YAB1   --------->YAB1             ---------->DOF2          ================================= ---ZmHOX2a(1)--------->GLK1(2)    --------->MYB52(1) --------->HSFC1(1)          <-----------HVH21 ---LBD16 --------->YAB1         --------->ARR11(3)   --------->HSFB2a(2)       *TSS<---------DEAR3(1) ---GT1 --------->GLK1(2)     XXXXXXXXXXXXXXXXXXXX>MIR835-3P        <------ZmHOX2a(1) <------NtERF2   gatgattcagaatcagaatcagagcttttggagaagataacgcatgaaagatgtttctagagagaagagaggaagaaatcaaatggtcggaggagataga  18734200                                                             --------->WRKY38(1)                                                             --------->ZAT18                                                             <---------ZAT14                                                             --------->WRKY12                                                          <---------ANAC58                                                          <---------ANAC58                                                          <---------ANAC46                                                    --------->REM1(2) --------->ANAC46           <-------MYC3          <-------MYC3 ----->CCA1(2)              <-------MYC2          ------->MYC2 ---ZmHOX2a(2)              ------->MYC2          <-------MYC2 ---->ARR11(3)              ------->MYC3          ------->MYC3 -----ARR14(2)             <---------ANAC46      <---------ANAC46 -----ARR11(3)             <---------ANAC58      <---------ANAC58 ---->AGP1 ---------->ID1  <---------ANAC58      -------------->OsCBT ---->ARR14(2)       ---------->DOF2             <---------ANAC58                     --------->ICU4 ===HOX2a_HOX2a   --------->TOE2(3)<---------AHL20(2)   <---------ANAC46     <----------DOF2 ===HOX2a_HOX2a   <----------DOF2  --------->AHL20(2)<---------CCA1(2)    <-----------GT1          --   tccacgaggttttgtctctactttaaagcgcgtgtattaaaaaatatgagcgcgtgtatcgcgtggactgtttttttttctttctgtaatgaacaattga  18734300        <---------YAB1       --------->AHL20(1)      --------->AHL20(2)      <--------HAHB4      --------->YAB1                                <---------MYB52(1)      <---------AHL20(2)                           --------->TOE2(3)                            <----      -------->ATHB1                             <---------TOE2(3)                        -----------      <---------ICU4                             <---------TOE1(3)                       --------->At4g35610      --------->ATHB51                           ---------->ID1                 <---------AHL20(2)     <---------ATHB51                           <-----------GT1            --------->YAB1<---------At4g35610     --------->ICU4          >>>>>>>>>EIN3  ------->TEIL       --------->AHL20(2)      <--------P --------->HVH21   <---------YAB1 ----------------->AG    <---------YAB1   --------->AHL20(2) -------   tgtgacaattattttagttttatttttgtatacattgccaaaaatgtatttatcgttattttgataaaaatagacaatgaaatttataggtagctgtacc  18734400                                                                             <---------RVE1(1)                                                                            <---------ARR11(3)                                                                        ----------->GT1                                                                        <------MYB46(1)                                                                       --------->MYB111(1)                                                         <-----------GT1<------MYB83 -----ALFIN1   <---------GLK1(1)             <------ZmHOX2a(1)         --------->MYB46(2) ---->AtSPL3  <---------ARR14(2)          <------ZmHOX2a(1)     ----------->GT1                     - -->SPL7      --------->ARR14(2)     --------->YAB1   <---------ICU4   --------->MYB111(2)   --------   acatgagagtgaattggatttgcctaatgctagactcattcataggaggaaaacaatatttacaaatagtaagtaggtgatattttgttatacataaacg  18734500                                   ------>ZmHOX2a(1)                      <---------AHL20(2)                      --------->AHL20(2)                     <---------AHL20(2)               <---------YAB1                 ---------->DOF2 -------->YAB1 ----------->GT1 <-----------GT1     <---------YAB1        <---------YAB1          ---- ->MYB52(1)---------->DOF2   <-----------GT1   <----------DOF2           <---------AHL20(2)   <------   gattataagtttctaaagagtaatttatatttttctccttctaaatgagctttattattagagacacatttcaatttcattgtttacaaaaggaatttac  18734600                                                                                                  ---                                                                                              -------                          --------------->AtSPL8              <-----------GT1        <---------ANAC46 ------>DOF2             <----------DOF2                ------->MYC3        <----------DOF2   ------- -----GT1           ------->TEIL                        <-------MYC3      <---------MYB46(3)  -------   aaagttgacacaagattgtatgtatcactttgtacattttcttagcctaagattaacacatgtattacattctcggtgcttaaacttgtgtattatacgc  18734700  Previous    Next  AGI:  At5g46170.1    Description:  F-box family protein. Identical to F-box protein At5g46170 [Arabidopsis Thaliana] (GB:Q9FNK5); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G18380.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73778.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40342.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 18732192    to: 18734180    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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